CCCTC-binding factor (zinc finger protein) (CTCF) - 4623 nt intron 04 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.54775
gtgctggataagaatgttgggggctacaacagcaaatgctcagacttcgctttttagtat  c.952+60

         .         .         .         .         .         .  g.54835
tcattcaagctgactccagcgggaatttaaaggaagtttttattatttcttatgatgccc  c.952+120

         .         .         .         .         .         .  g.54895
tttttgtaatcatgattttattgtaagcacttggacttagttattatagacaaatgtaaa  c.952+180

         .         .         .         .         .         .  g.54955
gaaaatttaatgaaaaataacaccctctctcttaaaaaaaagaagtctcaggcaatagat  c.952+240

         .         .         .         .         .         .  g.55015
gcctggtactatgaggaagaatgttagaaatagaagtgaaatcccagtgaaaccctgtct  c.952+300

         .         .         .         .         .         .  g.55075
ctactaaaaatacaaaaaattagctgggtgtggtggtgggcgcctgtagtcccagctact  c.952+360

         .         .         .         .         .         .  g.55135
cgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagttagccgag  c.952+420

         .         .         .         .         .         .  g.55195
atcccaccactgcactccagcctgggcgacagtgcgagtctccgtctaaaaaaaaagaaa  c.952+480

         .         .         .         .         .         .  g.55255
agaaaagaaatagaagtgaaatcctacctttatttaaaaaaaaaaaagtggccgggtaca  c.952+540

         .         .         .         .         .         .  g.55315
gtggctcacgcctgtaatcctaacactctgggaggctgaggtgggcagatcacttgagat  c.952+600

         .         .         .         .         .         .  g.55375
tagaagttggagaccagcctggccaacgtgacaaaatcacatccatctgtactagaaata  c.952+660

         .         .         .         .         .         .  g.55435
cataaattagccaggtgtggtggcgggtgcctgtaatcccagctactcaggaggctcagg  c.952+720

         .         .         .         .         .         .  g.55495
caggagaatcgcttgaaacctgggaggcagacactgcaatgagctgagatagtgctactg  c.952+780

         .         .         .         .         .         .  g.55555
cactccagcctgggcgacagagtgagactccatctcaaaaacaaaccttaacattttttg  c.952+840

         .         .         .         .         .         .  g.55615
tttctggttgtttcacgtcaaggaagataattcataatttcagaatggaaaagctaaggc  c.952+900

         .         .         .         .         .         .  g.55675
accattctgataattcaaacatttatttgagcatcctacttactttagtgttcagatatt  c.952+960

         .         .         .         .         .         .  g.55735
ctgatattagcttcatgttggctgtggccaggttccctgaggtctctaaagtagagggac  c.952+1020

         .         .         .         .         .         .  g.55795
tctgtgcactaaacctctctttaagctttcctgagctatttgttatcccagtgtaggaag  c.952+1080

         .         .         .         .         .         .  g.55855
ttggttgcaagtcttctcacatggtttttcatgcagaataacttcatttcatatgacaac  c.952+1140

         .         .         .         .         .         .  g.55915
tcttgtttttgatttttaggtttttaaaaatttctaatgacaacccttgttttagatttg  c.952+1200

         .         .         .         .         .         .  g.55975
ttgtgctggttgtcagatgaccatgatcaagtgggtgttaatcataaacagtatgctgca  c.952+1260

         .         .         .         .         .         .  g.56035
catgggcacattcttcactaatgtgacttacttttaaacatctccctaatttctactcag  c.952+1320

         .         .         .         .         .         .  g.56095
acacttgataatatgttttatttgatactttgaagacactaggatggggcatatgactaa  c.952+1380

         .         .         .         .         .         .  g.56155
ataaaagtaactgggtaatcccagcactttggaaatccaatggggggtagatgacctgag  c.952+1440

         .         .         .         .         .         .  g.56215
gccaggagttctagaccagcccggccaacatggcaaaaccgcctctgtactgaaaataca  c.952+1500

         .         .         .         .         .         .  g.56275
aaaaatcagctgggtgtagtggcacacgcctgtaaacccagctacttgggtggctgaggc  c.952+1560

         .         .         .         .         .         .  g.56335
aggagaatcacttgaatgcgggagacagaggttgcagtaagccaagattgtgccaccgta  c.952+1620

         .         .         .         .         .         .  g.56395
ctccaacctaagtgacagagcaagactctgcctcaccaaaataaataaataaataaataa  c.952+1680

         .         .         .         .         .         .  g.56455
atggccccataacaggacttcccaagatgggtgtgccttggtgtgggcattctctatctg  c.952+1740

         .         .         .         .         .         .  g.56515
gtcttcagctttgaaagtaagaggtacagtctatctggttactcagcagatttggcaaga  c.952+1800

         .         .         .         .         .         .  g.56575
ctgattcataccaacaaaacccataagagcagatgcatacaccaagagtatcagtttatg  c.952+1860

         .         .         .         .         .         .  g.56635
gtgaggagtataccttttcatgttccagatgcagttgcattgcattctagggggcgcctt  c.952+1920

         .         .         .         .         .         .  g.56695
tgcctctgttacgatgctgtagcagccgggcgccgtagctctcgcctgtaatcccatcac  c.952+1980

         .         .         .         .         .         .  g.56755
tttgggaggccgaggtgggtggatcacctgaggtcaggagttcaagaccagcctggctaa  c.952+2040

         .         .         .         .         .         .  g.56815
catgacgaaacctcgtctctactaaaaatataaaaattagccgggcgtggtgacgcatgc  c.952+2100

         .         .         .         .         .         .  g.56875
ctgtagtcccagctactcggaaggctgaggcaggagaattgcttaaatccaggaagcaga  c.952+2160

         .         .         .         .         .         .  g.56935
aattgcagtgagtggagatcgcaccattgcactccagcctgggcgacagagtgagactcc  c.952+2220

         .         .         .         .         .         .  g.56995
atctcaaaaaaaaaaaaaaaaaaaaaagatgttgtagcaattgaaagctaacttggtgag  c.952+2280

         .         .         .    g.57027
gatgagccttgatggctgggcatggtggctca  c.952+2312

--------------------- middle of intron ---------------------
                 g.57028      .         .         .           g.57058
                 c.953-2311  cacctgtaatccctgcacctagggaggctga  c.953-2281

.         .         .         .         .         .           g.57118
ggcgggtggatcacttgaggtcaggggtttgagaccagtctggccaacatgatgaaacct  c.953-2221

.         .         .         .         .         .           g.57178
catctccactaaaaatacaaaaattagccaggtggccgggtgtggtggcttacgcctgta  c.953-2161

.         .         .         .         .         .           g.57238
atcccagcactttggcactttgggaggctgacgcgggcagatcacctgaggtcaggagtt  c.953-2101

.         .         .         .         .         .           g.57298
caagactagcctgaccaacatggggaaatcctgtctctattaaaaatacaaaattagccg  c.953-2041

.         .         .         .         .         .           g.57358
ggtgtggtggcacatgcctgtaatcccaactactcgggaggctgaggcaggagaatcact  c.953-1981

.         .         .         .         .         .           g.57418
taaacccaggaggcggaggttgcggtgagctgagatcgtgccattgcactccagcctggg  c.953-1921

.         .         .         .         .         .           g.57478
caacaagagcaaaactcggtctcaagaaaaagccaggcatggtggcccatgcctgtaatc  c.953-1861

.         .         .         .         .         .           g.57538
ccagcacttcgggaggctgaagcaggcggatcacaagggcaggagatcgagaccatcctg  c.953-1801

.         .         .         .         .         .           g.57598
gccaacatggtgaaaccccgtctctactgaaaatagaaaaaaaaaatgttagccaggtgt  c.953-1741

.         .         .         .         .         .           g.57658
ggtggcatgtacctgtagtcccagctactcaggaggctgaggcaagagaattacttcaac  c.953-1681

.         .         .         .         .         .           g.57718
ctggaaggtagaggttgcagtgagccaaaatcatgctactgcactacaacctgggcgaca  c.953-1621

.         .         .         .         .         .           g.57778
gagcaagagactccgtctcaaaaaaaagaggatgggccttgagtgaagggatgtaggtgg  c.953-1561

.         .         .         .         .         .           g.57838
tcatgtggcacagcctaatggaactccctgccccacagcagtgtccacttctttgctaat  c.953-1501

.         .         .         .         .         .           g.57898
tgccacgcttatgcaggcctttctctgccctggatagtactaggtaaacacgagcattta  c.953-1441

.         .         .         .         .         .           g.57958
ttttttagcttactttgttctaaaagaagaccaagcatggtggctcacaacctgtaatct  c.953-1381

.         .         .         .         .         .           g.58018
caggactttgtgaggccgaggccggaggattgcttgagcccaggagtttgagacaagcct  c.953-1321

.         .         .         .         .         .           g.58078
gggcaacgtggcaagactccatctctacaaaatagaaaaaattagccaggcatggtggtg  c.953-1261

.         .         .         .         .         .           g.58138
caagcctgtagtctcagctactggagaggctgaagtaggaggatcacttgagcctgggaa  c.953-1201

.         .         .         .         .         .           g.58198
gtcaaggctgcagtgagccttgatcctatcactgcactcccactgggtaacagaggaaga  c.953-1141

.         .         .         .         .         .           g.58258
ccctggctcaaaaacaaaaaacgaaaagaaaattggatgccacttttcttctcttgttaa  c.953-1081

.         .         .         .         .         .           g.58318
ttgttttacttcttatccataccaccagactatacactttcacaggaagaactctgtgct  c.953-1021

.         .         .         .         .         .           g.58378
ttaccgttagatccatagtggttctaaagaatcgaatgaacaaatgaacattccttggaa  c.953-961

.         .         .         .         .         .           g.58438
ttgcttagtttttattatactccagtcactcttcctctccagcattctcttcattctcaa  c.953-901

.         .         .         .         .         .           g.58498
agagaatcatttctgcagatggctggttctattcattacattgtggctcttcctaattgt  c.953-841

.         .         .         .         .         .           g.58558
atcctcaaaggcagccttcctttggttttagtgtttgatactaccttgctgtcacccctt  c.953-781

.         .         .         .         .         .           g.58618
acctgctgcccacaattacagatggtcactagtctgtgaaactagcactgcattgtgctc  c.953-721

.         .         .         .         .         .           g.58678
tcagttttgtctctaagattccttcagtgaaagacaagaaatgtagagagtatattattc  c.953-661

.         .         .         .         .         .           g.58738
atgttttatattggatgaattgacattcagaatgatcacagcatattagacatggatgtt  c.953-601

.         .         .         .         .         .           g.58798
tgaaaatcatttgtttaaatcacataaaaggaaatactatgtaaagcctgtgataagcct  c.953-541

.         .         .         .         .         .           g.58858
ctgaaattccttatcaagacagatacatgtggaaaacaagttatatgtttgtgtttttaa  c.953-481

.         .         .         .         .         .           g.58918
aagaaagttgcagaatatggacagcccaatggccctatatttatagtcataatacaacga  c.953-421

.         .         .         .         .         .           g.58978
gatttgagagacaggatcttgctatgttgcccaggctggtctcaaactcttagcctccca  c.953-361

.         .         .         .         .         .           g.59038
gagttctgggattagaggcatgagccaccaagcccggtctctattaacttttaatccata  c.953-301

.         .         .         .         .         .           g.59098
atgaccaggatattcacaaaataggaataagaaggtttttattgtattcaaaggcagcgg  c.953-241

.         .         .         .         .         .           g.59158
attcagatgggtaattaagagaaactaatttggtatgtgttataatatcctggtgttagt  c.953-181

.         .         .         .         .         .           g.59218
ataaattcatccaggccctcccatagttttcggagctgacttttgtatctgctttcaagc  c.953-121

.         .         .         .         .         .           g.59278
tactgcagttgatgggatgaatagggttccagtctcatagcagttctgtgccacacattg  c.953-61

.         .         .         .         .         .           g.59338
aactctgtcattaactgtgcccttgatcttgctcttcctgttactccatcctttctctag  c.953-1


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