dystroglycan 1 (dystrophin-associated glycoprotein 1) (DAG1) - coding DNA reference sequence

(used for variant description)

(last modified September 24, 2026)


This file was created to facilitate the description of sequence variants on transcript NM_004393.5 in the DAG1 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NC_000003.11, covering DAG1 transcript NM_004393.5.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
           .         .         .         .         .                g.6487
   aggcagaagccggcggcgcgcggacagccagtcggcgccgcgcggagctggccgctgg       c.-361

 .         .         .         .         .         .                g.6547
 attggctgcaacactcgcgtgtcaggcggttgctaggctccggccgcgcgccccgccctt       c.-301

 .         .         .         .         .         .                g.6607
 gcgctcagcgccctctcaccgcccggtacgtgctcgcgcgaaggctgcggcgcggcgctc       c.-241

 .         .         .         .         .         .                g.6667
 gcgcctcttaggcttggcggtggcggcggcggcagcttcgcgccgaatccccggggagcg       c.-181

 .         .         .         .         .         .                g.6727
 gcggtggcggcgtcctggggccaggaggagcgaacacctgccgcggtcctcccgccggcg       c.-121

 .    | 02    .         .         .         .         .             g.46772
 ctgg | gctctgtgtgctccgggatggagcaggtgtgcagagggtgagaacccagctctggg    c.-61

 .         .         .         .         .         .                g.46832
 accaagtcacttgcttccttacttagcaagactatcgacttgagcaaacttggacctggg       c.-1

          .         .         .         .         .         .       g.46892
 ATGAGGATGTCTGTGGGCCTCTCGCTGCTGCTGCCCCTCTCGGGGAGGACCTTTCTCCTC       c.60
 M  R  M  S  V  G  L  S  L  L  L  P  L  S  G  R  T  F  L  L         p.20

          .         .         .         .         .         .       g.46952
 CTGCTCTCTGTGGTTATGGCTCAGTCCCACTGGCCCAGTGAACCCTCAGAGGCTGTCAGG       c.120
 L  L  S  V  V  M  A  Q  S  H  W  P  S  E  P  S  E  A  V  R         p.40

          .         .         .         .         .         .       g.47012
 GACTGGGAAAACCAGCTTGAGGCATCCATGCACTCAGTGCTCTCAGACCTCCACGAGGCT       c.180
 D  W  E  N  Q  L  E  A  S  M  H  S  V  L  S  D  L  H  E  A         p.60

          .         .         .         .         .         .       g.47072
 GTTCCCACAGTGGTTGGCATTCCTGATGGCACGGCTGTCGTCGGGCGCTCATTTCGAGTG       c.240
 V  P  T  V  V  G  I  P  D  G  T  A  V  V  G  R  S  F  R  V         p.80

          .         .         .         .      | 03  .         .    g.67109
 ACCATTCCAACAGATTTGATTGCCTCCAGTGGAGATATCATCAAG | GTATCAGCGGCAGGG    c.300
 T  I  P  T  D  L  I  A  S  S  G  D  I  I  K   | V  S  A  A  G      p.100

          .         .         .         .         .         .       g.67169
 AAGGAGGCTTTGCCATCTTGGCTGCACTGGGACTCACAGAGCCACACCCTGGAGGGCCTC       c.360
 K  E  A  L  P  S  W  L  H  W  D  S  Q  S  H  T  L  E  G  L         p.120

          .         .         .         .         .         .       g.67229
 CCCCTTGACACTGATAAGGGTGTGCATTACATTTCAGTGAGCGCTACACGGCTGGGGGCC       c.420
 P  L  D  T  D  K  G  V  H  Y  I  S  V  S  A  T  R  L  G  A         p.140

          .         .         .         .         .         .       g.67289
 AACGGGAGCCACATCCCCCAGACCTCCAGTGTGTTCTCCATCGAGGTCTACCCTGAAGAC       c.480
 N  G  S  H  I  P  Q  T  S  S  V  F  S  I  E  V  Y  P  E  D         p.160

          .         .         .         .         .         .       g.67349
 CACAGTGAGCTGCAGTCGGTGAGGACAGCCTCCCCAGACCCTGGTGAGGTGGTATCATCT       c.540
 H  S  E  L  Q  S  V  R  T  A  S  P  D  P  G  E  V  V  S  S         p.180

          .         .         .         .         .         .       g.67409
 GCCTGTGCTGCGGATGAACCTGTGACTGTTTTGACGGTGATTTTGGATGCCGACCTCACC       c.600
 A  C  A  A  D  E  P  V  T  V  L  T  V  I  L  D  A  D  L  T         p.200

          .         .         .         .         .         .       g.67469
 AAGATGACCCCAAAGCAAAGGATTGACCTCCTGCACAGGATGCGGAGCTTCTCAGAAGTA       c.660
 K  M  T  P  K  Q  R  I  D  L  L  H  R  M  R  S  F  S  E  V         p.220

          .         .         .         .         .         .       g.67529
 GAGCTTCACAACATGAAATTAGTGCCGGTGGTGAATAACAGACTATTTGACATGTCGGCC       c.720
 E  L  H  N  M  K  L  V  P  V  V  N  N  R  L  F  D  M  S  A         p.240

          .         .         .         .         .         .       g.67589
 TTCATGGCTGGCCCGGGAAATGCAAAAAAGGTGGTGGAGAATGGGGCCCTTCTCTCCTGG       c.780
 F  M  A  G  P  G  N  A  K  K  V  V  E  N  G  A  L  L  S  W         p.260

          .         .         .         .         .         .       g.67649
 AAGCTGGGCTGCTCCCTGAACCAGAACAGTGTGCCTGACATTCATGGTGTAGAGGCCCCT       c.840
 K  L  G  C  S  L  N  Q  N  S  V  P  D  I  H  G  V  E  A  P         p.280

          .         .         .         .         .         .       g.67709
 GCCAGGGAGGGCGCAATGTCTGCTCAGCTTGGCTACCCTGTGGTGGGTTGGCACATCGCC       c.900
 A  R  E  G  A  M  S  A  Q  L  G  Y  P  V  V  G  W  H  I  A         p.300

          .         .         .         .         .         .       g.67769
 AATAAGAAGCCCCCTCTTCCCAAACGCGTCCGGAGGCAGATCCATGCTACACCCACACCT       c.960
 N  K  K  P  P  L  P  K  R  V  R  R  Q  I  H  A  T  P  T  P         p.320

          .         .         .         .         .         .       g.67829
 GTCACTGCCATTGGGCCCCCAACCACGGCTATCCAGGAGCCCCCATCCAGGATCGTGCCA       c.1020
 V  T  A  I  G  P  P  T  T  A  I  Q  E  P  P  S  R  I  V  P         p.340

          .         .         .         .         .         .       g.67889
 ACCCCCACATCTCCAGCCATTGCTCCTCCAACAGAGACCATGGCTCCTCCAGTCAGGGAT       c.1080
 T  P  T  S  P  A  I  A  P  P  T  E  T  M  A  P  P  V  R  D         p.360

          .         .         .         .         .         .       g.67949
 CCTGTTCCTGGGAAACCCACGGTCACCATCCGGACTCGAGGCGCCATTATTCAAACCCCA       c.1140
 P  V  P  G  K  P  T  V  T  I  R  T  R  G  A  I  I  Q  T  P         p.380

          .         .         .         .         .         .       g.68009
 ACCCTAGGCCCCATCCAGCCTACTCGGGTGTCAGAAGCTGGCACCACAGTTCCTGGCCAG       c.1200
 T  L  G  P  I  Q  P  T  R  V  S  E  A  G  T  T  V  P  G  Q         p.400

          .         .         .         .         .         .       g.68069
 ATTCGCCCAACGATGACCATTCCTGGCTATGTGGAGCCTACTGCAGTTGCTACCCCTCCC       c.1260
 I  R  P  T  M  T  I  P  G  Y  V  E  P  T  A  V  A  T  P  P         p.420

          .         .         .         .         .         .       g.68129
 ACAACCACCACCAAGAAGCCACGAGTATCCACACCAAAACCAGCAACGCCTTCAACTGAC       c.1320
 T  T  T  T  K  K  P  R  V  S  T  P  K  P  A  T  P  S  T  D         p.440

          .         .         .         .         .         .       g.68189
 TCCACCACCACCACGACTCGCAGGCCAACCAAGAAACCACGGACACCCCGGCCAGTGCCC       c.1380
 S  T  T  T  T  T  R  R  P  T  K  K  P  R  T  P  R  P  V  P         p.460

          .         .         .         .         .         .       g.68249
 CGGGTCACCACCAAAGTTTCCATCACCAGATTGGAAACTGCCTCACCGCCTACTCGTATT       c.1440
 R  V  T  T  K  V  S  I  T  R  L  E  T  A  S  P  P  T  R  I         p.480

          .         .         .         .         .         .       g.68309
 CGCACCACCACCAGTGGAGTGCCCCGTGGCGGAGAACCCAACCAGCGCCCAGAGCTCAAG       c.1500
 R  T  T  T  S  G  V  P  R  G  G  E  P  N  Q  R  P  E  L  K         p.500

          .         .         .         .         .         .       g.68369
 AACCATATTGACAGGGTAGATGCCTGGGTTGGCACCTACTTTGAGGTGAAGATCCCGTCA       c.1560
 N  H  I  D  R  V  D  A  W  V  G  T  Y  F  E  V  K  I  P  S         p.520

          .         .         .         .         .         .       g.68429
 GACACTTTCTATGACCATGAGGACACCACCACTGACAAGCTGAAGCTGACCCTGAAACTG       c.1620
 D  T  F  Y  D  H  E  D  T  T  T  D  K  L  K  L  T  L  K  L         p.540

          .         .         .         .         .         .       g.68489
 CGGGAGCAGCAGCTGGTGGGCGAGAAGTCCTGGGTACAGTTCAACAGCAACAGCCAGCTC       c.1680
 R  E  Q  Q  L  V  G  E  K  S  W  V  Q  F  N  S  N  S  Q  L         p.560

          .         .         .         .         .         .       g.68549
 ATGTATGGCCTTCCCGACAGCAGCCACGTGGGCAAACACGAGTATTTCATGCATGCCACA       c.1740
 M  Y  G  L  P  D  S  S  H  V  G  K  H  E  Y  F  M  H  A  T         p.580

          .         .         .         .         .         .       g.68609
 GACAAGGGGGGCCTGTCGGCTGTGGATGCCTTCGAGATCCACGTCCACAGGCGCCCCCAA       c.1800
 D  K  G  G  L  S  A  V  D  A  F  E  I  H  V  H  R  R  P  Q         p.600

          .         .         .         .         .         .       g.68669
 GGGGATAGGGCTCCTGCAAGGTTCAAGGCCAAGTTTGTGGGTGACCCGGCACTGGTGTTG       c.1860
 G  D  R  A  P  A  R  F  K  A  K  F  V  G  D  P  A  L  V  L         p.620

          .         .         .         .         .         .       g.68729
 AATGACATCCACAAGAAGATTGCCTTGGTAAAGAAACTGGCCTTCGCCTTTGGAGACCGA       c.1920
 N  D  I  H  K  K  I  A  L  V  K  K  L  A  F  A  F  G  D  R         p.640

          .         .         .         .         .         .       g.68789
 AACTGTAGCACCATCACCCTGCAGAATATCACCCGGGGCTCCATCGTGGTGGAATGGACC       c.1980
 N  C  S  T  I  T  L  Q  N  I  T  R  G  S  I  V  V  E  W  T         p.660

          .         .         .         .         .         .       g.68849
 AACAACACACTGCCCTTGGAGCCCTGCCCCAAGGAGCAGATCGCTGGGCTGAGCCGCCGG       c.2040
 N  N  T  L  P  L  E  P  C  P  K  E  Q  I  A  G  L  S  R  R         p.680

          .         .         .         .         .         .       g.68909
 ATCGCTGAGGATGATGGAAAACCTCGGCCTGCCTTCTCCAACGCCCTAGAGCCTGACTTT       c.2100
 I  A  E  D  D  G  K  P  R  P  A  F  S  N  A  L  E  P  D  F         p.700

          .         .         .         .         .         .       g.68969
 AAGGCCACAAGCATCACTGTGACGGGCTCTGGCAGTTGTCGGCACCTACAGTTTATCCCT       c.2160
 K  A  T  S  I  T  V  T  G  S  G  S  C  R  H  L  Q  F  I  P         p.720

          .         .         .         .         .         .       g.69029
 GTGGTACCACCCAGGAGAGTGCCCTCAGAGGCGCCGCCCACAGAAGTGCCTGACAGGGAC       c.2220
 V  V  P  P  R  R  V  P  S  E  A  P  P  T  E  V  P  D  R  D         p.740

          .         .         .         .         .         .       g.69089
 CCTGAGAAGAGCAGTGAGGATGATGTCTACCTGCACACAGTCATTCCGGCCGTGGTGGTC       c.2280
 P  E  K  S  S  E  D  D  V  Y  L  H  T  V  I  P  A  V  V  V         p.760

          .         .         .         .         .         .       g.69149
 GCAGCCATCCTGCTCATTGCTGGCATCATTGCCATGATCTGCTACCGCAAGAAGCGGAAG       c.2340
 A  A  I  L  L  I  A  G  I  I  A  M  I  C  Y  R  K  K  R  K         p.780

          .         .         .         .         .         .       g.69209
 GGCAAGCTTACCCTTGAGGACCAGGCCACCTTCATCAAGAAGGGGGTGCCTATCATCTTT       c.2400
 G  K  L  T  L  E  D  Q  A  T  F  I  K  K  G  V  P  I  I  F         p.800

          .         .         .         .         .         .       g.69269
 GCAGACGAACTGGACGACTCCAAGCCCCCACCCTCCTCCAGCATGCCACTCATTCTGCAG       c.2460
 A  D  E  L  D  D  S  K  P  P  P  S  S  S  M  P  L  I  L  Q         p.820

          .         .         .         .         .         .       g.69329
 GAGGAGAAGGCTCCCCTACCCCCTCCTGAGTACCCCAACCAGAGTGTGCCCGAGACCACT       c.2520
 E  E  K  A  P  L  P  P  P  E  Y  P  N  Q  S  V  P  E  T  T         p.840

          .         .         .         .         .         .       g.69389
 CCTCTGAACCAGGACACCATGGGAGAGTACACGCCCCTGCGGGATGAGGATCCCAATGCG       c.2580
 P  L  N  Q  D  T  M  G  E  Y  T  P  L  R  D  E  D  P  N  A         p.860

          .         .         .         .         .         .       g.69449
 CCTCCCTACCAGCCCCCACCGCCCTTCACAGCACCCATGGAGGGCAAGGGCTCCCGTCCC       c.2640
 P  P  Y  Q  P  P  P  P  F  T  A  P  M  E  G  K  G  S  R  P         p.880

          .         .         .         .                           g.69497
 AAGAACATGACCCCATACCGGTCACCTCCTCCCTATGTCCCACCTTAA                   c.2688
 K  N  M  T  P  Y  R  S  P  P  P  Y  V  P  P  X                     p.895

          .         .         .         .         .         .       g.69557
 cccgcaagcgcctgggtggaggcagggtagggcaggggcctggagacgacatggtgttgt       c.*60

          .         .         .         .         .         .       g.69617
 ctgtggagaccggtggcctgcagaccattgcccaccgggagccgacacctgacctagcac       c.*120

          .         .         .         .         .         .       g.69677
 acactgacacaggggcctggacaagcccgccctctctggtcctcccaaaccccaaagcag       c.*180

          .         .         .         .         .         .       g.69737
 ctggagagactttggggacttttttatttttattttttgcctaacagcttttggtttgtt       c.*240

          .         .         .         .         .         .       g.69797
 catagagaattcttcgcttcatttttgatggctggctctgaaagcaccatgtggagtgga       c.*300

          .         .         .         .         .         .       g.69857
 ggtggagggagcgaggaaccatgaatgaactcgcaggcagtgccgggcggccccctggct       c.*360

          .         .         .         .         .         .       g.69917
 ctctgcgttttgcctttaacactaactgtactgttttttctattcacgtgtgtctagctg       c.*420

          .         .         .         .         .         .       g.69977
 caggatgtaacatggaaaacagtaactaaagattaaattcaaaggactttcagaagttaa       c.*480

          .         .         .         .         .         .       g.70037
 ggttaagtttttacgtttaatctgctgtttacctaaacttgtatgtataatttttgggtg       c.*540

          .         .         .         .         .         .       g.70097
 ggtatggggaattgctttgctaaaaataagctcccagggtgtttcaaacttagagaagac       c.*600

          .         .         .         .         .         .       g.70157
 caagggacagtattttttatcaaaggaatactattttttcacactacgtcaacttggttg       c.*660

          .         .         .         .         .         .       g.70217
 ctctgataccccagagcctgattgggggcctcccggccctggctcacgccaagtccctgg       c.*720

          .         .         .         .         .         .       g.70277
 tgctgggtttgctctcccgctgttgccaggggctggaagctggaggggtctcttgggcca       c.*780

          .         .         .         .         .         .       g.70337
 tggacatccccacttccagcccatgtacactagtggcccacgaccaaggggtcttcattt       c.*840

          .         .         .         .         .         .       g.70397
 ccatgaaaaagggactccaagaggcagtggtggctgtggcccccaactttggtgctccag       c.*900

          .         .         .         .         .         .       g.70457
 ggtgggccagctgcttgtgggggcacctgggaggtcaaaggtctccaccacatcaaccta       c.*960

          .         .         .         .         .         .       g.70517
 ttttgttttaccctttttctgtgcattgtttttttttttcctcctaaaaggaatatcacg       c.*1020

          .         .         .         .         .         .       g.70577
 gttttttgaaacactcagtgggggacattttggtgaagatgcaatatttttatgtcatgt       c.*1080

          .         .         .         .         .         .       g.70637
 gatgctctttcctcacttgaccttggccgctttgtcctaacagtccacagtcctgccccg       c.*1140

          .         .         .         .         .         .       g.70697
 acccaccccatcccttttctctggcactccagtcccaggccttgggcctgaactactgga       c.*1200

          .         .         .         .         .         .       g.70757
 aaaggtctggcggctggggaggagtgccagcaatagttcataataaaaatctgttagctc       c.*1260

          .         .         .         .         .         .       g.70817
 tcaaagctaattttttactaaagtttttatacagcctcaaattgttttattaaaaaaaag       c.*1320

          .         .         .         .         .         .       g.70877
 atttaaaatggtgatgcttacagcagtttgtacgagctcttaagtgttgattccatggaa       c.*1380

          .         .         .         .         .         .       g.70937
 ctgacggctttgcttgttttgattcttttccccctacttttcctaatggtttaaattctg       c.*1440

          .         .         .         .         .         .       g.70997
 gaattacactggggttcttttgccttttttagcagaacatccgtccgtccatctgcatct       c.*1500

          .         .         .         .         .         .       g.71057
 ctgtcccatgactcaggggcgcccactctgcttcgattctcctcctgtggaagaaaccat       c.*1560

          .         .         .         .         .         .       g.71117
 tttgagcatgacttttcttgatgtctgaagcgttattttgggtactttttagggaggaat       c.*1620

          .         .         .         .         .         .       g.71177
 gcctttcgcaataatgtatccattccctgattgagggtgggtgggtggacccaggctccc       c.*1680

          .         .         .         .         .         .       g.71237
 tttgcacacagagcagctacttctaagccatatcgactgttttgcagaggatttgtgtgt       c.*1740

          .         .         .         .         .         .       g.71297
 gctgcctcaggaggggagggctggtaggagggggggagaggtctctgtcctactgctctc       c.*1800

          .         .         .         .         .         .       g.71357
 cagagggcatttccccttgcgccttctcccacagggcccagcccctctcccctgccccag       c.*1860

          .         .         .         .         .         .       g.71417
 tccccagggggtactctggagtgagcagtgcccctgtgggggagcctgtaaatgcgggct       c.*1920

          .         .         .         .         .         .       g.71477
 cagtggaccactggtgactgggctcatgcctccaagtcagagtttccctggtgccccaga       c.*1980

          .         .         .         .         .         .       g.71537
 gacaggagcacaagtgggatctgacctggtgagattatttctgatgacctcatcaaaaaa       c.*2040

          .         .         .         .         .         .       g.71597
 taaacaattcccaatgttccaggtgagggctttgaaaggccttccaaacagctccgtcgc       c.*2100

          .         .         .         .         .         .       g.71657
 ccctagcaactccaccattgggcactgccatgcagagacgtggctggcccagaatggcct       c.*2160

          .         .         .         .         .         .       g.71717
 gttgccatagcaactggaggcgatggggcagtgaacagaataacaacagcaacaatgcct       c.*2220

          .         .         .         .         .         .       g.71777
 ttgcaggcagcctgctcccctgagcgctgggctggtgatggtcgttggactctgtgagat       c.*2280

          .         .         .         .         .         .       g.71837
 ggagagccaatctcacattcaagtgttcaccaaccactgatgtgtttttatttccttcta       c.*2340

          .         .         .         .         .         .       g.71897
 tatgattttaagatgtgttttctgcattctgtaaagaaacatatcaaactaaataaaagc       c.*2400

          .                                                         g.71916
 agtgtctttattacaacgc                                                c.*2419

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Dystroglycan 1 (dystrophin-associated glycoprotein 1) protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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