host cell factor C1 (VP16-accessory protein) (HCFC1) - upstream reference sequence


                                            g.1                 g.8
                                            c.-5528 ggtagaga    c.-5521

.         .         .         .         .         .             g.68
tggggtttcgccatgttggccaggctggtctcgaactcctgatctcaggtgatctggccg    c.-5461

.         .         .         .         .         .             g.128
tcttggcctcccaaagtactgggattacaggcttgaaacaccgcgcccgccaacagttta    c.-5401

.         .         .         .         .         .             g.188
tttttaaatggctcaataatattccatcatgtatctataccacattttctttacatatca    c.-5341

.         .         .         .         .         .             g.248
atccactggtggacacttagattgcttccatatcttagctattataagtagtacaaaggc    c.-5281

.         .         .         .         .         .             g.308
acgaagaacctacattggggaaaggatggtctcttcaataaatggcactgggaaaattgg    c.-5221

.         .         .         .         .         .             g.368
ataagtatgtgaagaagaatgaaaactaggcccctatctctcaccacacacagtaatcaa    c.-5161

.         .         .         .         .         .             g.428
ctcaacatggattaaagacttaaaagtaagacctgaaactataaagctactagaagaggc    c.-5101

.         .         .         .         .         .             g.488
cagcgcggtggctcacacctgtaatcccagcacactgggaggttgaggcgggcagatcac    c.-5041

.         .         .         .         .         .             g.548
ttaaggtcaggagttctagaccagcctggccaacacagtgcaaccccgtctctactaaaa    c.-4981

.         .         .         .         .         .             g.608
atacaaaaagtagccgggcgtggtggcgcacatctgtaatcccagttactcagggggctg    c.-4921

.         .         .         .         .         .             g.668
gggcaggagaaatgcttgaacccaagaggaggaggttgcagtgagccaagatcacaccac    c.-4861

.         .         .         .         .         .             g.728
tgcactccagcctggggcgacagagcaagactctgtctttaaaaaaaaaaaaaaaaaaaa    c.-4801

.         .         .         .         .         .             g.788
aaaaaaaaaaaggctgggtgtggtggctcacacctgtaatcccagcacactgggaggctg    c.-4741

.         .         .         .         .         .             g.848
aggcgggcagatcacctgaggtcaggagttccagcccagcctgtccaacatggtgaaacc    c.-4681

.         .         .         .         .         .             g.908
ccatctctactaaaagtataaaaattagccagggtggtggcatgcgcctgtaatcccagc    c.-4621

.         .         .         .         .         .             g.968
tacttgtgagggtgtggcaggagaatcgcttgatcccaggaggctaaggttgcagtgagc    c.-4561

.         .         .         .         .         .             g.1028
caagattgtgccactgcactccagcctgggtttcagagtgagactgtgtctcaaaaaata    c.-4501

.         .         .         .         .         .             g.1088
aataaataaataaatacaaataataaaataaataaaataaaactactagaagaaaatggg    c.-4441

.         .         .         .         .         .             g.1148
gaaatgctccaggaaagattttatggctaagaccccaaaatcacaggcaacaaaaacaaa    c.-4381

.         .         .         .         .         .             g.1208
aacagacaaatgggagtatattaaagtaaaaagcttttgcacagcacagaagcaatcaac    c.-4321

.         .         .         .         .         .             g.1268
aatgaagagacaatataggagaaaatatttgcaaatgattcatgtgacaagcactgttta    c.-4261

.         .         .         .         .         .             g.1328
tttttgaggtgcaatgtccatctgccctactgcaatttaggccccaaatgggtgggacag    c.-4201

.         .         .         .         .         .             g.1388
ggtctgattccttgctcttcctcagatgcccagtgaagccctgctcaatttcaattcaat    c.-4141

.         .         .         .         .         .             g.1448
tatattaaagaacaaagccagcacctctgctcccttttaccagtcctgtttgctatttca    c.-4081

.         .         .         .         .         .             g.1508
cttctcaagcaggtcctggggcccaccgcatcctcctgggcctcattctcagccttcttg    c.-4021

.         .         .         .         .         .             g.1568
ccttggagttccgttgctgaggagggccaccaggcttggcatgtgggtgccccattgccc    c.-3961

.         .         .         .         .         .             g.1628
tctgaagcatggtgttgccacacaggaaccacagtcctcactatcactccatacgtcctt    c.-3901

.         .         .         .         .         .             g.1688
gcttcacacaagcctgccatctcagcatggggcacccgaactcctcctgccccgtcctcc    c.-3841

.         .         .         .         .         .             g.1748
cagtcaaaaaagcctctgggtccaggggtgtgcacaccgcagccccagcatctttgagca    c.-3781

.         .         .         .         .         .             g.1808
gccctggatgggatcatgtctgccctggctttccacccttccatgaccagcttcccattc    c.-3721

.         .         .         .         .         .             g.1868
catgtcctggatcatgtcccaaagtcttggccagacttaaagtgccatccccatccagcc    c.-3661

.         .         .         .         .         .             g.1928
ctgtgagctcctcaggcccagctctgtcctggaagccctttgcccacttcgcctggccat    c.-3601

.         .         .         .         .         .             g.1988
tgcccttgactcagctgtcatttcctctcaggcacttccccgttcagctcctgactccag    c.-3541

.         .         .         .         .         .             g.2048
ctgagacaccagctgaggccccgcatggcgtctacaggtccttccctgcacccacctagg    c.-3481

.         .         .         .         .         .             g.2108
gccccatggcacccatgctagtctgaccctcctgcctgccagcaagcagggcggagagct    c.-3421

.         .         .         .         .         .             g.2168
ggaacaagagtcaaacactgtcaacttgatcgaggaagaactccaggaagggcatggaaa    c.-3361

.         .         .         .         .         .             g.2228
gcaactcctctttccggctgcaggggttcagtctatctgaccgggggtacgggctgacag    c.-3301

.         .         .         .         .         .             g.2288
tgaccatgtaatcaaagcacctgtccaagacccccaggaaaaccgagctggttaccttat    c.-3241

.         .         .         .         .         .             g.2348
agcctagcttccctgtacctttgaattgccatgatccttattatgtgacactcaaatctc    c.-3181

.         .         .         .         .         .             g.2408
gtcacagcttcccccagcgcctggcatgggaaagccaacacctcaacagcactggcccct    c.-3121

.         .         .         .         .         .             g.2468
gggtctggggtctttcagggaagccctgggaagcctgacaatctcctggctaaaggcccc    c.-3061

.         .         .         .         .         .             g.2528
agactctcccgcacgcgtttaaacagcaggcactgtcacctccaggcctttagcatttat    c.-3001

.         .         .         .         .         .             g.2588
ggttagttatgtcccccgctccgcatgacctttcttgctgtctttctgtggataaaggaa    c.-2941

.         .         .         .         .         .             g.2648
tatcaattaacattaatttagcttctggactgattccaggcaaggcccttggaaaccagc    c.-2881

.         .         .         .         .         .             g.2708
agctgcttttgtgtgtgtgtgtgtgtgtgtgtgtgtttttgagacagggtcttgctctgt    c.-2821

.         .         .         .         .         .             g.2768
cgcccaggctggagcagtggcgcgatctcagctcactgcagccctgaactccctggctca    c.-2761

.         .         .         .         .         .             g.2828
agccatcctcccacctcagcgttccaagtacctgggaccacaggcgtgtgccaccatgcc    c.-2701

.         .         .         .         .         .             g.2888
tccgggtctcgctatgttgccccggctaggctcaagcaatcctcccacctcagccttcca    c.-2641

.         .         .         .         .         .             g.2948
aagtgttgggattacaggcatgagccaacgcatcaggccttagttttcttatttaccatg    c.-2581

.         .         .         .         .         .             g.3008
ggtgggggacttggggacatatgtgaggtaactagccaaggtcacaaagagcaggtggtg    c.-2521

.         .         .         .         .         .             g.3068
gcacagacaggcaagaattcttctctttgtcccttctcaaatggatacttccaactgcat    c.-2461

.         .         .         .         .         .             g.3128
gaactaaaacacagacgattacaaaatacatgtaatatgttgagaggcgactttaaaaat    c.-2401

.         .         .         .         .         .             g.3188
attgttgaaaatgtgtgagagggtgacgtgtgcttctttactaacgcattaaattacaag    c.-2341

.         .         .         .         .         .             g.3248
gtcttccagcaggacgcataacttcagtaacttcaaagtaataattctgcccgccggtag    c.-2281

.         .         .         .         .         .             g.3308
atctggtagatcttgtaatttaactgaacttctagacgtttacaacaaaagccacaggct    c.-2221

.         .         .         .         .         .             g.3368
ctgacaggaccggtctgtccatttctactggcgactgccgctcccgggcagcagcttggg    c.-2161

.         .         .         .         .         .             g.3428
tccccgcgctgcggcctgcgcgtggcagggcggatgccgccgccgccgccgccgccgccg    c.-2101

.         .         .         .         .         .             g.3488
cgcccgggcggcctcctagaggaggcgaaacgtgggggcgaggccgggacccacctccca    c.-2041

.         .         .         .         .         .             g.3548
gggctgcggtgagcacttacagtattggcgcgaaaaggccagctatcaccatacgggtat    c.-1981

.         .         .         .         .         .             g.3608
ttcgcctcactcgcctcgctgggggaaattcaaatctccgaaaagggaggatccgagcag    c.-1921

.         .         .         .         .         .             g.3668
cgccggtgcgcctgcgcgcagggcgggactcgaagcctgggaagcgggcggggcgaggtg    c.-1861

.         .         .         .         .         .             g.3728
acgcgagatgacgcggacgcctcccgcggtcgcccgcccggctcgtgcgccaccggcccg    c.-1801

.         .         .         .         .         .             g.3788
actgcgggcctctcggcagtgggggcggccgagcgcgcggcggtctggggcgcgcggccc    c.-1741

.         .         .         .         .         .             g.3848
ggctcattttgctgcggcgcgggcggaggcggtggcgcccgagggcgggccccgcagcct    c.-1681

.         .         .         .         .         .             g.3908
gggagcctgggagcgggcggaggctccacccccgggcgccggcgctcggctgcgtcgcct    c.-1621

.         .         .         .         .         .             g.3968
cccactgtcgccccgcccccggctcccccgcggcgcgcctcgggccgcctcctgcggctg    c.-1561

.         .         .         .         .         .             g.4028
ctgggtgtgcagggcgcgaaaatgctcgcttcccggccgcaggcgcggctgcagtggctg    c.-1501

.         .         .         .         .         .             g.4088
ttcgccaaccccggccacctgcgtgccgctgtccccagtgctggttaaaggcagttcttc    c.-1441

.         .         .         .         .         .             g.4148
gggcgtgcgtcccttatcaacccgagagaccgttcccaagggggcggggccgagcgcgtc    c.-1381

.         .         .         .         .         .             g.4208
ggaggggttagcagtctcatccgggcatttccgagatgccgccgccgccatctttgtttt    c.-1321

.         .         .         .         .         .             g.4268
gtgctgaaagtcgctattgacgcccgcggacggccgggcgaggggaagtggcaagatggc    c.-1261

.         .         .         .         .         .             g.4328
ggctcccagggcggaggcgtggaggctcgcccggtgggggggccgtggggcggggcgcgc    c.-1201

.         .         .         .         .         .             g.4388
ctgcgcctgcacctgatctgagcgcgactcgagctttagcccagcgcgcggcagcgccga    c.-1141

.         .         .         .         .         .             g.4448
cccccacccccgccgcgaggcagcgcaggggtcctttaagaggcttgggcccaggggcga    c.-1081

.         .         .         .         .         .             g.4508
agcggtgcgagggcgagtggggggaagcggtgacgtcacccggctccgcctcctcgcccg    c.-1021

.         .         .         .         .         .             g.4568
accgccggcgccgctgccgccatgtttagttgttacttcttcacacaagatggcggctcc    c.-961

.         .         .         .         .         .             g.4628
cagggaggaggcatgagcgccctgccgttaccgcttcttctgccgtacagttgccgcttc    c.-901

.         .         .         .         .         .             g.4688
ggggcctaactctagctctttgaagcggctcctgtgggaaggagtcataaggcgggaagt    c.-841

.         .         .         .         .         .             g.4748
gaggatcggacaccgccttgagtttggtgtgcagtggaagaactgacctaggaggaagag    c.-781

.         .         .         .         .         .             g.4808
aataggggggaacggggagctagtctcaagatggcggctcccacggcggcaggcgcagcc    c.-721

.         .         .         .         .         .             g.4868
tgagcagcagaggcggactaaggggagaggcgcgagacttcacaagccgtacggcgcgag    c.-661

.         .         .         .         .         .             g.4928
cccccaaacggccctcgagagctcgagctggttccaccggcctccggcccgcctccattc    c.-601

.         .         .         .         .         .             g.4988
gttaggtgtgtcgaggctgtttcgggagcggcggctgcactaaggcgctgggcggggaag    c.-541

.         .            .         .         .         .          g.5048
cgggacggtctc \ aagatggcggctcccacaattgtggtctgagcgccggcggggctgcga c.-481


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