homogentisate 1,2-dioxygenase (HGD) - 6233 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5535
gtaagaaaccatctgacaagtttgctatggcttcttcagccaaaatttatggaagtttct  c.15+60

         .         .         .         .         .         .  g.5595
gagaacttcagggtatcagagttggaaaagacttagagaggccctggttcaaacccctgt  c.15+120

         .         .         .         .         .         .  g.5655
gttcagaggcttccctgtggtgtctgtgggcacagctggagctgaagaacaagggaaagg  c.15+180

         .         .         .         .         .         .  g.5715
tgataaaggaaagaaatgaagctcttattggtcatcccttgcctttgttcatttcaatta  c.15+240

         .         .         .         .         .         .  g.5775
ttgtcttggaaatctgtagacatcctaagagctcccctccactacggacatgcacgtttc  c.15+300

         .         .         .         .         .         .  g.5835
tctctatgtctttttcccaacccctgctctgacaccttcccattgctgcagcctcatgga  c.15+360

         .         .         .         .         .         .  g.5895
ccacttccggtgaccagttagatatgcttgatctatttagttaattaaggctctgaatca  c.15+420

         .         .         .         .         .         .  g.5955
gcccttggccagaagaagcacctcctctaggaaatcattccttctttttagtaatacgca  c.15+480

         .         .         .         .         .         .  g.6015
attgaaaagtatgtgtgggttatgtgctgttaggtgctaagcattttagctatgaattaa  c.15+540

         .         .         .         .         .         .  g.6075
ctcataatcctcaaaataaatctggggtatagagagaggttcttgtttcaattagaaaag  c.15+600

         .         .         .         .         .         .  g.6135
taatgcttggagagactatgatttgcccaaggtcactgccaatagatgacttgattagaa  c.15+660

         .         .         .         .         .         .  g.6195
gcagggtatgtttgaatgcgaagtccaggctcaaaaaggggccttagtggctcctactag  c.15+720

         .         .         .         .         .         .  g.6255
actggtatcttaaggcaaggaaaacagaatatgtccctaatatctaaaaccatgcctagt  c.15+780

         .         .         .         .         .         .  g.6315
gcccaggccaggcttgaatcaatgctcaacgcatgcatgtgtaactgaacagaactgccc  c.15+840

         .         .         .         .         .         .  g.6375
agaaccttggctcaggccaagtaggccagaccaccccacaacagacatcttccctgaatg  c.15+900

         .         .         .         .         .         .  g.6435
cagggtttgagaagtgccctaatgccctctaactgatgctgagtttgaagaatccatcag  c.15+960

         .         .         .         .         .         .  g.6495
ttaaggggaggtgtttctgagtttgaagaatcaaacaccttcctaattggtaggaatcct  c.15+1020

         .         .         .         .         .         .  g.6555
gaaaacactccacaccggagtaaaagactttggttttttatctttatgcctgactaaaag  c.15+1080

         .         .         .         .         .         .  g.6615
ttaactctcattctttcattcagcaaatattttgtgctagtgcatgacactgcagattaa  c.15+1140

         .         .         .         .         .         .  g.6675
tatcgtagatgaactgagtctgggctaggtagagtcaaaaaaaaatttcctaaaggagcc  c.15+1200

         .         .         .         .         .         .  g.6735
tgtacctaaactgagtcttcagagagaagttggaactggcaaagtgaggaaggacggggt  c.15+1260

         .         .         .         .         .         .  g.6795
ctggagggaagagtgagtgcaaaggcacagcacatacagaatgcctgcatgctctagaat  c.15+1320

         .         .         .         .         .         .  g.6855
ccaaaactgtgtcagccaaatttgagttgatggagggacagccaaactgagatacccagg  c.15+1380

         .         .         .         .         .         .  g.6915
cggtggttggatttatggatctggatttcaggggagtgggcagggctaggggaatagaac  c.15+1440

         .         .         .         .         .         .  g.6975
tgagggtcatgatgtcagtggtaggagttgaagtcttggaagaaagagtagatagaaact  c.15+1500

         .         .         .         .         .         .  g.7035
ttgttttctgatgaacattctatgaggaagttcagcagaggttggaaacatctttaccat  c.15+1560

         .         .         .         .         .         .  g.7095
ttataaataaattttatgtaaaatcctatcctgctgtcatgtttaagcaacttattatgc  c.15+1620

         .         .         .         .         .         .  g.7155
acagcaccaggacatcaatgtaaattgcatgccagtctttgctctcagtttcaaaggcat  c.15+1680

         .         .         .         .         .         .  g.7215
tcttccctgcctgctgtctaatctttacaaagaaaggttaactccagaggtcaggaatct  c.15+1740

         .         .         .         .         .         .  g.7275
gaacacagaaaaccagattgcatcatattcattctaatcaataaacattatataattttt  c.15+1800

         .         .         .         .         .         .  g.7335
aaaactgtttctcatcttttatttcttcattttaatgaatatgtcaacacaaagccgtaa  c.15+1860

         .         .         .         .         .         .  g.7395
atgaaatcacatttacacaaaagtacaactggggtaagaaaattcaaaagataaagtaat  c.15+1920

         .         .         .         .         .         .  g.7455
aaaattaaatttaaaatgaaataccctatgtatttgagtaagttgcttagcttctcccaa  c.15+1980

         .         .         .         .         .         .  g.7515
ccttggtttcctcatttctaaaacgaagaacttgcttaatattcaggctctgggccccac  c.15+2040

         .         .         .         .         .         .  g.7575
caccaaatccttgattcactggctctgggtctgtatgtaacaagcttctggagtgattct  c.15+2100

         .         .         .         .         .         .  g.7635
aatgattagccagagacaggacctactattctacgtaactgatttcctcttgctgctgta  c.15+2160

         .         .         .         .         .         .  g.7695
aaaaattaccacaaatttattggcttaaaacaacacaaatgtattatcttgaagttgtgg  c.15+2220

         .         .         .         .         .         .  g.7755
aggtcagaagtctgaaatcggtttcactgggctaaagtcgaggtgtcagtgtggctgttt  c.15+2280

         .         .         .         .         .         .  g.7815
cttctggagactctatgagagattgtgttttcctgccttttccatggattctgtttcctc  c.15+2340

         .         .         .         .         .         .  g.7875
ttctagaggctacccacattccttggtttgtagcctcttcctcgatcttcaaaaaaatgt  c.15+2400

         .         .         .         .         .         .  g.7935
atctctgcttttgtaatcacgtcacattttctcctcttataagtcaaatctccctttgcc  c.15+2460

         .         .         .         .         .         .  g.7995
tccctcttataatgacacttgtgattacatttaggatacacccaaataattaggatatct  c.15+2520

         .         .         .         .         .         .  g.8055
ccccatcccaagatccttaattatatatgcaaaagtctgtttggctagaaaagataatac  c.15+2580

         .         .         .         .         .         .  g.8115
tcacaggtttcaggggttaagccatacatatctttcagagtgagccattagccattattc  c.15+2640

         .         .         .         .         .         .  g.8175
agcctactgcgataatgtgcaagttccctttacaatctatgttctatgttcccatcaagg  c.15+2700

         .         .         .         .         .         .  g.8235
ttaattagaaatattagactctttttccacagaaaaaaaaaatgtagcagtagtttcatc  c.15+2760

         .         .         .         .         .         .  g.8295
tctaccctgacttctctctctttccttcatgcccagtaagaggaagtgaggtgcaccatc  c.15+2820

         .         .         .         .         .         .  g.8355
tgttcatctcatcaggtgttacctagaatcagagtcaggagaaagcacctcataaaacta  c.15+2880

         .         .         .         .         .         .  g.8415
ctctgacaagtaaaccatatcctggggaccaggtgagaattaaaaagctgtatactcata  c.15+2940

         .         .         .         .         .         .  g.8475
agctgccaaagagctgatggtactgaagtcacatggagctcaggaatttattcttgcatt  c.15+3000

         .         .         .         .         .         .  g.8535
tagaaagtatgcatataattctctcgaaaagaaatgaaatcatatttttctgtcggatca  c.15+3060

         .         .         .         .         .         g.8592
aattattcagaaatccgaactgtagaaaacatacaaacacacttgcttaatgttagc  c.15+3117

--------------------- middle of intron ---------------------
          .         .         .         .         .           g.8648
    tttttaatcttatttttgtacacagtatacttttacataggcactgaaccagctgg  c.16-3061

.         .         .         .         .         .           g.8708
aaatgaatgcttggattttcgcagctgataaaagcagagttcagattctgtccttgagct  c.16-3001

.         .         .         .         .         .           g.8768
caatgtctggagaaagcagctgtgaatactgcttccttaattcagatgcctttggccgtg  c.16-2941

.         .         .         .         .         .           g.8828
aggggcatggcattttaaagctgcaataaactctgtactttttctctcaggggattagaa  c.16-2881

.         .         .         .         .         .           g.8888
aaaccaattgatttgatagtgactcagcagttttcaccttcctctttagccaatgccctg  c.16-2821

.         .         .         .         .         .           g.8948
cagctaagattgagaaacggattcagaactcacacctcttggtgcttggtggctcccttc  c.16-2761

.         .         .         .         .         .           g.9008
caaaccatcagctgttctttctactttctttcctattttttaaagcacagtctgaatcaa  c.16-2701

.         .         .         .         .         .           g.9068
gtgcttcagaaccatttatactaactcgtgttccaaacacataaccctgaaccctcttct  c.16-2641

.         .         .         .         .         .           g.9128
aaggccaccagttacaaagaatggggaaggttaatgagtaactccaccagtgcctgccag  c.16-2581

.         .         .         .         .         .           g.9188
aaagctcagctgtactccagccttccttcctctcttgcagagagaaacaatgcggcagtt  c.16-2521

.         .         .         .         .         .           g.9248
gaacaaagcgaaggcactgtaatgcccagtggcttcagtcacaggctggtctaaaattcc  c.16-2461

.         .         .         .         .         .           g.9308
atttcacagaattgaagataatttggggttattaccaattctcagcagctcaaattcaat  c.16-2401

.         .         .         .         .         .           g.9368
cccgttgatggtgagcatggggttcattttgagagtagaaaattggatgcagtggagaat  c.16-2341

.         .         .         .         .         .           g.9428
cagaatgttggatggtctctgccatttccccaaagatatcatcctaactgcatgctgctg  c.16-2281

.         .         .         .         .         .           g.9488
cttttaacaaatcagtatacaacttagtattttttgtgttgacaaattttcaaatataca  c.16-2221

.         .         .         .         .         .           g.9548
aaatattgagtctgaaggcaaaaagaataatttttcacttccattgcttcctaggtcata  c.16-2161

.         .         .         .         .         .           g.9608
acattcacatctgatatttcttccaaatacagactgttgttggcctgatcatcactcaca  c.16-2101

.         .         .         .         .         .           g.9668
catccaggcttgttacatctccacgccactgagtatcagggaacctgccccaatattcac  c.16-2041

.         .         .         .         .         .           g.9728
gtaggttcttttctattttccctaagcgtcggccaactttagaaataaagggacagagta  c.16-1981

.         .         .         .         .         .           g.9788
caaaagagagaaattttaaagccgggcatccgggggaggcatcacatttcggtaggttcc  c.16-1921

.         .         .         .         .         .           g.9848
gtgatgccccacaagccacaaaaaccagcaagtttgtattagggattttcaaatggggag  c.16-1861

.         .         .         .         .         .           g.9908
gcagtgtgcaaataggtgtgggtcacagacatcaagtactttacaaggtaatagaatatc  c.16-1801

.         .         .         .         .         .           g.9968
acaaggcaagtggaggcagggtgagatcacaggaccacaggaccgaggcgaaattaaaat  c.16-1741

.         .         .         .         .         .           g.10028
tgctaatgaagtttcgggcaccattgtcattgataacatcttatcaggagacagggtttt  c.16-1681

.         .         .         .         .         .           g.10088
taggatcaactggtctgaccaaaatttattaggcgggaatttcctcttcctaataagcct  c.16-1621

.         .         .         .         .         .           g.10148
gggagcgctgtgggagactggggtctatttcacccctgcagtctcgaccataagagacag  c.16-1561

.         .         .         .         .         .           g.10208
gcgcacctggaggggggctgtttataagcctatacctcctggctcgtattctctttctca  c.16-1501

.         .         .         .         .         .           g.10268
gggatgttccatgctgagaaaaagaattcagcgatatttctcccatttgcttttgaaaga  c.16-1441

.         .         .         .         .         .           g.10328
agagaaatatggctctgttctgcctggctcaccagcagtcagagtttaaggttatctctc  c.16-1381

.         .         .         .         .         .           g.10388
ttattccctgaacaattgctgttatcctgttcttttttcaaggtgtccacatttcatgtt  c.16-1321

.         .         .         .         .         .           g.10448
gctcaaacacacatgctgtacaatttgtgcagttaatgcaattattacagggtcctgagg  c.16-1261

.         .         .         .         .         .           g.10508
caatatacatcctcctcagctgacaggattaagagattaaagtaaagacaggcataaatc  c.16-1201

.         .         .         .         .         .           g.10568
acaaggatattgactggggaagtgataagtgtccatgaaatctttacaatttatgtttag  c.16-1141

.         .         .         .         .         .           g.10628
agattgcagtaaagacaggcataagaaattacaaaagtattaatttggggaactaataaa  c.16-1081

.         .         .         .         .         .           g.10688
tgtccatgaaatcttcacaatccacgaacttctgccatggcttcagctgatccctccgtt  c.16-1021

.         .         .         .         .         .           g.10748
tggagtcccagacttcccgcaacaactgagaactctggagggcctacccttcacccactt  c.16-961

.         .         .         .         .         .           g.10808
ccacccttcttatatctcttaaggagctgtgttcagatggttacatttcgcttgctgagc  c.16-901

.         .         .         .         .         .           g.10868
aagactgcattttcattatcctgggctaaaatcaattggtatttaagttagagcaaaaag  c.16-841

.         .         .         .         .         .           g.10928
ggttctaaccctatttacagcagcacacatacacttacattagaattggctttaagggaa  c.16-781

.         .         .         .         .         .           g.10988
aaattcaatcaatcgacaaatttccactgattaccttctatgagccaagactgccatagt  c.16-721

.         .         .         .         .         .           g.11048
ctcagccttcatgcagcttataggctagcaaaaaagccagacagtgcacaagaactcaca  c.16-661

.         .         .         .         .         .           g.11108
agtgtgttgagtgttgcaagagtaagtttcaggggctctccatgacttacctggttgaga  c.16-601

.         .         .         .         .         .           g.11168
aaccctttaactttttttttcctctgggtgtaaagtgaagagatggcaatcagagtaggt  c.16-541

.         .         .         .         .         .           g.11228
tccattgtgtcattgtgaaaagatgctgggctggcgtgtctcctgaaggccacccatatc  c.16-481

.         .         .         .         .         .           g.11288
tttaaactttattttcatgcattcgcacaaatatagatgtgttccatagatgaggcagat  c.16-421

.         .         .         .         .         .           g.11348
agcagaggcttctgcctacagcaaggctagtttggagagggttttgctgtcagggttgga  c.16-361

.         .         .         .         .         .           g.11408
cccacacacctcttcatagatgctttttcttttttttcccagagtttgaaagggaaatgg  c.16-301

.         .         .         .         .         .           g.11468
agtctcaagttcagggaggttacagtgtagacccacaaatcagctaagtacagctaaggg  c.16-241

.         .         .         .         .         .           g.11528
tggagaagtctatgcaatatccagcactcttctgattaattagaagtctttaaaattcac  c.16-181

.         .         .         .         .         .           g.11588
agaaaccatattgtcttccctaaatgattcatatgtcaagacacagtaaagatattatat  c.16-121

.         .         .         .         .         .           g.11648
gtggaacatcatacacaaacataggtccatatagaaattcttaccttagtaaactgccaa  c.16-61

.         .         .         .         .         .           g.11708
ttttctgaaatgctctttaaatcctgctaatggtggcatttgtgtctttgtcacctacag  c.16-1


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