homogentisate 1,2-dioxygenase (HGD) - upstream reference sequence


                                                    g.1     .         .         .         .         .         .             g.0
                                                    c.-5460     c.-5461

.         .         .         .         .         .             g.60
tagctagagttattcaaaaaagaatgaagcacaatttttgctaggacttcttgagaacta    c.-5401

.         .         .         .         .         .             g.120
ttcataaaaatgcttttagataataaacaagtataaatgtcaaaatatttttttaaaagt    c.-5341

.         .         .         .         .         .             g.180
ataattggccaggtgctggctcacgcctataatcccagcactctaggagactgaggcagg    c.-5281

.         .         .         .         .         .             g.240
aggatcacttgagctcgggagtttgaggctgcagtgattcatgattgcaccactgccttc    c.-5221

.         .         .         .         .         .             g.300
cagcagcctgatgacagagtgggactccatctctttacatatgtatatcttactctcttg    c.-5161

.         .         .         .         .         .             g.360
atgggacaagttggtagaaataaagattttttttttctgttgtgatttcggtgtctgacc    c.-5101

.         .         .         .         .         .             g.420
aattttctgactcattgtgaaggtgaccagatatgaaggcatatatatgactactcctct    c.-5041

.         .         .         .         .         .             g.480
gtcccttaggtgtataagacttagctggaatccaactaaagatttgggctggtctctcca    c.-4981

.         .         .         .         .         .             g.540
tcttaacgttgatgggattcaggacacataaccccaaaatattgcaccctgttatttgag    c.-4921

.         .         .         .         .         .             g.600
aaaactgcagaagcaaggtttctcataccttccccttaccccttctcccctgaagcaggc    c.-4861

.         .         .         .         .         .             g.660
cataaaccctaagtgactgttccctgaagtagatcataaaaccttcattccataggtacc    c.-4801

.         .         .         .         .         .             g.720
ctttatcctcacagatacagagacaccaagaagaatctggacaaataggacttgctaagt    c.-4741

.         .         .         .         .         .             g.780
tctccacagtttattaccattagattatgtccttttgtcctctgattatacttctgcata    c.-4681

.         .         .         .         .         .             g.840
agactgtacataaaaatacacaagttttcctatttcttttttgtcttcatttctgaagat    c.-4621

.         .         .         .         .         .             g.900
tcctgtcatgtaaaacttacagtaaataaatgtgtgtgcttttctcaataatctgtcttt    c.-4561

.         .         .         .         .         .             g.960
cgttataggtgcctcatttgtgaacctagtgatgggtgaagaaagaaagctcttctccgc    c.-4501

.         .         .         .         .         .             g.1020
tacagtgctctaagaaaagctattcccaaaagagttgatccatattagctttagctcggg    c.-4441

.         .         .         .         .         .             g.1080
ttcttagaattcctcaaacttgaggcattcatgatataatccaggtgccctgacacttgt    c.-4381

.         .         .         .         .         .             g.1140
ttttctgttcattctgacatggacttcatggaaatgatgtgcagggacatcagactgagg    c.-4321

.         .         .         .         .         .             g.1200
tgaagagctcctaattgctccttgtaatcagagtttctgagtcctcatttcaatagtttg    c.-4261

.         .         .         .         .         .             g.1260
cagtagcacccaccataggtaggaccttgtatgggttactagatggtggcttaattgaat    c.-4201

.         .         .         .         .         .             g.1320
tttttaaagcacaggtgacatcatattttaagaagtttaaaggtctaacagggtgtctgc    c.-4141

.         .         .         .         .         .             g.1380
attggtttaatatatgttaaaattcaaaggaggagtctgttttggggaaaggaggagaag    c.-4081

.         .         .         .         .         .             g.1440
gaaattagaaattcatttctccgcagtcccaagactgagctaaatcactgtggtgggaga    c.-4021

.         .         .         .         .         .             g.1500
ggaagggtcgcaggaagtctaaccctgtgtctcaaatatttcacaacatgtttgcctaca    c.-3961

.         .         .         .         .         .             g.1560
caaaatatctgatgttagggtcagctggggctgctccatagcatagtaaaggaattggac    c.-3901

.         .         .         .         .         .             g.1620
atccagttacaattaatctgcacctccattaaggactcacatggagggctttcaaactct    c.-3841

.         .         .         .         .         .             g.1680
gaagtgtgtaagaatcccctgaagtgcttgctgaaaatgcagattccacgatttcctctc    c.-3781

.         .         .         .         .         .             g.1740
tcttcccttactctcccctttctatatgtataggataaggccaggattttgtatttttaa    c.-3721

.         .         .         .         .         .             g.1800
cagacaagccagatttttctcatgcagataagtcaggatctagcctttaagaaagacaaa    c.-3661

.         .         .         .         .         .             g.1860
taaactcatcaaaaagtagggaatatagattgtgaactctgtactttatgagtgccatta    c.-3601

.         .         .         .         .         .             g.1920
tagcagaattcatcaaagcgcatctttgactgcctcaacctgatctcaccttaatgaact    c.-3541

.         .         .         .         .         .             g.1980
gatccactcctccccactcaaagctacatatgccaaattaaacatgagatgattgtcatg    c.-3481

.         .         .         .         .         .             g.2040
tcttctgttggcaaaacaagtatttgtctttcatgtattgctatcatttttattactgcc    c.-3421

.         .         .         .         .         .             g.2100
actgtttttcccctgggttctgtttttaatccaaatatatttatttctaaccagtgcctt    c.-3361

.         .         .         .         .         .             g.2160
gccatcttacacacagccccctctctagtactgtgttttctcagctggctaatcactaag    c.-3301

.         .         .         .         .         .             g.2220
ctttaccgaggtcatcaataactaatgacaaagaatggaacccctaaactccaaccaagg    c.-3241

.         .         .         .         .         .             g.2280
tgtaaaacctcgctcagtaccatcaagtatatcaggtaatctctccgttccatctttttc    c.-3181

.         .         .         .         .         .             g.2340
tcggagacatctgtcctggagtcctctgatgcctaactccgttttggagtgattactctg    c.-3121

.         .         .         .         .         .             g.2400
tagacctgtcacaccctgcttcacattaccttgtagcaattcctggatgtaatgttttcc    c.-3061

.         .         .         .         .         .             g.2460
actttctatccaactcttactctatgggacttggctcagacatagtcttctctgggaagc    c.-3001

.         .         .         .         .         .             g.2520
cctccctggctctgctcgtctgggctacgtgcccactagtgcttcccctagatccctggg    c.-2941

.         .         .         .         .         .             g.2580
ctctttcctgtcagagcacttacactatgttgtgatggttttcaaaaattgttaaataaa    c.-2881

.         .         .         .         .         .             g.2640
tgaatgtataattacattaattaaaatggaaagccattagacatagaatcagaacttatc    c.-2821

.         .         .         .         .         .             g.2700
tgtagctgtgtaagttatttattctccaatcccagcaggacatgatggcttatgcctgta    c.-2761

.         .         .         .         .         .             g.2760
attccaatactttgggaggctgaggccagaggatggcttatgcctgggagttaaaggctg    c.-2701

.         .         .         .         .         .             g.2820
cagtgagctgtgatgatgccactgcactccagcttggatgacacagcaagactctgtctc    c.-2641

.         .         .         .         .         .             g.2880
taaaaaaaaacattaagtcaggtgcaggagttcacgtctgtaatcccagcactttgggag    c.-2581

.         .         .         .         .         .             g.2940
gctgaagtgggaggattgcttgagcctaggagttcaagttcagcctgggcaacatgacga    c.-2521

.         .         .         .         .         .             g.3000
gacctcatctctactaaaaaatttttaaagtagccgggtgtggtggtgtgtgcctgtagt    c.-2461

.         .         .         .         .         .             g.3060
cccagctactcaggaggctgagatgggaggatcgctttagcccaggaggttgaggcttca    c.-2401

.         .         .         .         .         .             g.3120
gtgagccatttttgtgccactgcactccagcctggatgacagagaacctgtctcaaaaaa    c.-2341

.         .         .         .         .         .             g.3180
aaaattaaataataaaataatattttaatatcccctgtgtgtattctctccttttagaag    c.-2281

.         .         .         .         .         .             g.3240
gaatccctaaagtttagtgaaagatgtattcaactttaaatattttcaagcccctcaaag    c.-2221

.         .         .         .         .         .             g.3300
taattttaatccagtcaaggaactgttaacactttcttaccccttcagaagtctctcata    c.-2161

.         .         .         .         .         .             g.3360
ccttaggaaagaactgaaacacttcttaaatctgccttcacaactggttcaatggaagta    c.-2101

.         .         .         .         .         .             g.3420
acatagaaagtttgttgaaaaataaggcagtaaagatttccctttgtcttttattagctc    c.-2041

.         .         .         .         .         .             g.3480
ccatttgtttatctaatgaccaactgctaacttccaagatcaatagagattgaaggccca    c.-1981

.         .         .         .         .         .             g.3540
aggtactcataaacttagatacacaggagatattttcttcgaattcagtttcagagtctg    c.-1921

.         .         .         .         .         .             g.3600
catgttataggaatagtgaaaacttagcctcaataaagctagggcctccacctaccttcc    c.-1861

.         .         .         .         .         .             g.3660
tcctaggtttgcatatgaattccagaatagtttatataatgccacaatgccatctgtcta    c.-1801

.         .         .         .         .         .             g.3720
tgctgacatatgctgaggtttcctatcagctgcccggtccgtaggcatcagtccacatgg    c.-1741

.         .         .         .         .         .             g.3780
tttgctaccagcatgtttcctatcaacatgtcccctttggtctggcccagtctgtgctag    c.-1681

.         .         .         .         .         .             g.3840
cacctcatacacaggcaataattctgctgctactgcagtatgctggagcctggggaccct    c.-1621

.         .         .         .         .         .             g.3900
tggaggttgtttaagcccatttatctaaagcagagggtctcaaactagcagcctgtggcc    c.-1561

.         .         .         .         .         .             g.3960
acttcaaatatgcacatgtttttcaacctgcatgattatatcagttatttatcactgctt    c.-1501

.         .         .         .         .         .             g.4020
aacaaaccaccccaaaatttagtagtgtgaaatacaccattctatttgttcccaattctg    c.-1441

.         .         .         .         .         .             g.4080
tggctcagcagttcgggccagatttaactggtggttcttctgctggtcttgcctgggatc    c.-1381

.         .         .         .         .         .             g.4140
acacatgttctgcagtcacctggcagccagactgcctcattcacatgtctggcagttcct    c.-1321

.         .         .         .         .         .             g.4200
gtggggcttgcagggctgttgcctggacctctggaggccagcccagcttctctgcactgt    c.-1261

.         .         .         .         .         .             g.4260
ggtctcaggctgcaagaatgggccctgtcctaaggcacaggcatgtttcaaactctgtgt    c.-1201

.         .         .         .         .         .             g.4320
catgtttgctactagccaaagaaaaagaccctacctcttgatgggaggaacagcaaagtc    c.-1141

.         .         .         .         .         .             g.4380
acattcaaaggggcacacatacaaggataggaggaattggagcattttttgccatctacc    c.-1081

.         .         .         .         .         .             g.4440
acagggtggtttctctgtctctctcactctaattaccaatggttaaaaattggagcttca    c.-1021

.         .         .         .         .         .             g.4500
tcttatcttgaaaaatcagctagcctactttattcacttacacttcctccctcatctgtt    c.-961

.         .         .         .         .         .             g.4560
ggcatttgagttgtgataatgcctaatttacaagattgtttttgtgaagttagatatgga    c.-901

.         .         .         .         .         .             g.4620
aaaatctgacaaaagcagaaactcaatatatgttttctcctttctgaacaccactagtca    c.-841

.         .         .         .         .         .             g.4680
tgaagctgctacctgccaatgaccaaggagagcggccaagatgaagaacaagggagtcat    c.-781

.         .         .         .         .         .             g.4740
agaggaggtggctggagaataatcccttggtctgttttagaagtatagaggcattaggaa    c.-721

.         .         .         .         .         .             g.4800
acaaaactcttaaagaatttataagaaaactaaacgtactttaagaaattaaaaggagca    c.-661

.         .         .         .         .         .             g.4860
gtaggaaacatatcagtttgctctaagtgaaatatctcaggctctgaatggttcacccaa    c.-601

.         .         .         .         .         .             g.4920
gaacctgagctcattcctgggaggcacctgcagaaaactggttctggtcctggtccctgt    c.-541

.         .         .         .         .         .             g.4980
cttcaggtggctgtgtgtaaacatcttaccccagtgtacacatctgcagctggtaaatgc    c.-481

.         .            .         .         .         .          g.5040
ctgggggttttctcactgct \ ctccaggagactcagcactgccctgttccttcctagcctg c.-421


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