(used for variant description)
(last modified October 23, 2016)
This file was created to facilitate the description of sequence variants on transcript NM_002111.6 in the HTT gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000004.11, covering HTT transcript NM_002111.6.
(upstream sequence)
. . g.5025
gctgccgggacgggtccaagatgga c.-121
. . . . . . g.5085
cggccgctcaggttctgcttttacctgcggcccagagccccattcattgccccggtgctg c.-61
. . . . . . g.5145
agcggcgccgcgagtcggcccgaggcctccggggactgccgtgccgggcgggagaccgcc c.-1
. . . . . . g.5205
ATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTCCAGCAGCAG c.60
M A T L E K L M K A F E S L K S F Q Q Q p.20
. . . . . . g.5265
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCGCCA c.120
Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q P P p.40
. . . . . . g.5325
CCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCGCCGCCGCAGGCACAGCCG c.180
P P P P P P P P P Q L P Q P P P Q A Q P p.60
. . . . . . g.5385
CTGCTGCCTCAGCCGCAGCCGCCCCCGCCGCCGCCCCCGCCGCCACCCGGCCCGGCTGTG c.240
L L P Q P Q P P P P P P P P P P G P A V p.80
. . | 02 . . . . g.17295
GCTGAGGAGCCGCTGCACCGACC | AAAGAAAGAACTTTCAGCTACCAAGAAAGACCGTGTG c.300
A E E P L H R P | K K E L S A T K K D R V p.100
. . . . | 03. . g.29606
AATCATTGTCTGACAATATGTGAAAACATAGTGGCACAGTCTGTCAG | AAATTCTCCAGAA c.360
N H C L T I C E N I V A Q S V R | N S P E p.120
. . . . . . g.29666
TTTCAGAAACTTCTGGGCATCGCTATGGAACTTTTTCTGCTGTGCAGTGATGACGCAGAG c.420
F Q K L L G I A M E L F L L C S D D A E p.140
. . . . | 04 . g.34155
TCAGATGTCAGGATGGTGGCTGACGAATGCCTCAACAAAGTTATCAAA | GCTTTGATGGAT c.480
S D V R M V A D E C L N K V I K | A L M D p.160
. . . . | 05 . g.35688
TCTAATCTTCCAAGGTTACAGCTCGAGCTCTATAAGGAAATTAAAAAG | AATGGTGCCCCT c.540
S N L P R L Q L E L Y K E I K K | N G A P p.180
. . . . . . g.35748
CGGAGTTTGCGTGCTGCCCTGTGGAGGTTTGCTGAGCTGGCTCACCTGGTTCGGCCTCAG c.600
R S L R A A L W R F A E L A H L V R P Q p.200
| 06 . . . . . g.37656
AAATGCAG | GCCTTACCTGGTGAACCTTCTGCCGTGCCTGACTCGAACAAGCAAGAGACCC c.660
K C R | P Y L V N L L P C L T R T S K R P p.220
. . . . . . g.37716
GAAGAATCAGTCCAGGAGACCTTGGCTGCAGCTGTTCCCAAAATTATGGCTTCTTTTGGC c.720
E E S V Q E T L A A A V P K I M A S F G p.240
. . | 07. . . . g.45656
AATTTTGCAAATGACAATGAAATTAAG | GTTTTGTTAAAGGCCTTCATAGCGAACCTGAAG c.780
N F A N D N E I K | V L L K A F I A N L K p.260
. . . . . . g.45716
TCAAGCTCCCCCACCATTCGGCGGACAGCGGCTGGATCAGCAGTGAGCATCTGCCAGCAC c.840
S S S P T I R R T A A G S A V S I C Q H p.280
. . . . | 08 . g.46415
TCAAGAAGGACACAATATTTCTATAGTTGGCTACTAAATGTGCTCTTAG | GCTTACTCGTT c.900
S R R T Q Y F Y S W L L N V L L G | L L V p.300
. . . . . . g.46475
CCTGTCGAGGATGAACACTCCACTCTGCTGATTCTTGGCGTGCTGCTCACCCTGAGGTAT c.960
P V E D E H S T L L I L G V L L T L R Y p.320
. . . . . . g.46535
TTGGTGCCCTTGCTGCAGCAGCAGGTCAAGGACACAAGCCTGAAAGGCAGCTTCGGAGTG c.1020
L V P L L Q Q Q V K D T S L K G S F G V p.340
. . . . | 09 . g.51559
ACAAGGAAAGAAATGGAAGTCTCTCCTTCTGCAGAGCAGCTTGTCCAG | GTTTATGAACTG c.1080
T R K E M E V S P S A E Q L V Q | V Y E L p.360
. . . . . . g.51619
ACGTTACATCATACACAGCACCAAGACCACAATGTTGTGACCGGAGCCCTGGAGCTGTTG c.1140
T L H H T Q H Q D H N V V T G A L E L L p.380
. . . . . . g.51679
CAGCAGCTCTTCAGAACGCCTCCACCCGAGCTTCTGCAAACCCTGACCGCAGTCGGGGGC c.1200
Q Q L F R T P P P E L L Q T L T A V G G p.400
. . . . . . g.51739
ATTGGGCAGCTCACCGCTGCTAAGGAGGAGTCTGGTGGCCGAAGCCGTAGTGGGAGTATT c.1260
I G Q L T A A K E E S G G R S R S G S I p.420
. | 10 . . . . . g.53255
GTGGAACTTATAG | CTGGAGGGGGTTCCTCATGCAGCCCTGTCCTTTCAAGAAAACAAAAA c.1320
V E L I A | G G G S S C S P V L S R K Q K p.440
| 11 . . . . . . g.55927
G | GCAAAGTGCTCTTAGGAGAAGAAGAAGCCTTGGAGGATGACTCTGAATCGAGATCGGAT c.1380
G | K V L L G E E E A L E D D S E S R S D p.460
. . | 12 . . . . g.57621
GTCAGCAGCTCTGCCTTAACAG | CCTCAGTGAAGGATGAGATCAGTGGAGAGCTGGCTGCT c.1440
V S S S A L T A | S V K D E I S G E L A A p.480
. . . . . . g.57681
TCTTCAGGGGTTTCCACTCCAGGGTCAGCAGGTCATGACATCATCACAGAACAGCCACGG c.1500
S S G V S T P G S A G H D I I T E Q P R p.500
. . . . . . g.57741
TCACAGCACACACTGCAGGCGGACTCAGTGGATCTGGCCAGCTGTGACTTGACAAGCTCT c.1560
S Q H T L Q A D S V D L A S C D L T S S p.520
. . . . . . g.57801
GCCACTGATGGGGATGAGGAGGATATCTTGAGCCACAGCTCCAGCCAGGTCAGCGCCGTC c.1620
A T D G D E E D I L S H S S S Q V S A V p.540
. . . . . . g.57861
CCATCTGACCCTGCCATGGACCTGAATGATGGGACCCAGGCCTCGTCGCCCATCAGCGAC c.1680
P S D P A M D L N D G T Q A S S P I S D p.560
. . . . . . g.57921
AGCTCCCAGACCACCACCGAAGGGCCTGATTCAGCTGTTACCCCTTCAGACAGTTCTGAA c.1740
S S Q T T T E G P D S A V T P S D S S E p.580
| 13 . . . . . . g.60300
ATT | GTGTTAGACGGTACCGACAACCAGTATTTGGGCCTGCAGATTGGACAGCCCCAGGAT c.1800
I | V L D G T D N Q Y L G L Q I G Q P Q D p.600
. . . . . . g.60360
GAAGATGAGGAAGCCACAGGTATTCTTCCTGATGAAGCCTCGGAGGCCTTCAGGAACTCT c.1860
E D E E A T G I L P D E A S E A F R N S p.620
| 14. . . . . . g.60677
TCCATGG | CCCTTCAACAGGCACATTTATTGAAAAACATGAGTCACTGCAGGCAGCCTTCT c.1920
S M A | L Q Q A H L L K N M S H C R Q P S p.640
. . . . . . g.60737
GACAGCAGTGTTGATAAATTTGTGTTGAGAGATGAAGCTACTGAACCGGGTGATCAAGAA c.1980
D S S V D K F V L R D E A T E P G D Q E p.660
| 15 . . . . . . g.61659
AACAAG | CCTTGCCGCATCAAAGGTGACATTGGACAGTCCACTGATGATGACTCTGCACCT c.2040
N K | P C R I K G D I G Q S T D D D S A P p.680
. . . . . | 16 g.61959
CTTGTCCATTGTGTCCGCCTTTTATCTGCTTCGTTTTTGCTAACAGGGGGAAAAAATG | TG c.2100
L V H C V R L L S A S F L L T G G K N V | p.700
. . . . . . g.62019
CTGGTTCCGGACAGGGATGTGAGGGTCAGCGTGAAGGCCCTGGCCCTCAGCTGTGTGGGA c.2160
L V P D R D V R V S V K A L A L S C V G p.720
. . . . . . g.62079
GCAGCTGTGGCCCTCCACCCGGAATCTTTCTTCAGCAAACTCTATAAAGTTCCTCTTGAC c.2220
A A V A L H P E S F F S K L Y K V P L D p.740
. | 17 . . . . . g.62925
ACCACGGAATACCCTG | AGGAACAGTATGTCTCAGACATCTTGAACTACATCGATCATGGA c.2280
T T E Y P E | E Q Y V S D I L N Y I D H G p.760
. . . . . . g.62985
GACCCACAGGTTCGAGGAGCCACTGCCATTCTCTGTGGGACCCTCATCTGCTCCATCCTC c.2340
D P Q V R G A T A I L C G T L I C S I L p.780
. . . . . | 18 . g.63138
AGCAGGTCCCGCTTCCACGTGGGAGATTGGATGGGCACCATTAGAACCCTCACAG | GAAAT c.2400
S R S R F H V G D W M G T I R T L T G | N p.800
. . . . . . g.63198
ACATTTTCTTTGGCGGATTGCATTCCTTTGCTGCGGAAAACACTGAAGGATGAGTCTTCT c.2460
T F S L A D C I P L L R K T L K D E S S p.820
. . . | 19 . . . g.64747
GTTACTTGCAAGTTAGCTTGTACAGCTGTGAGG | AACTGTGTCATGAGTCTCTGCAGCAGC c.2520
V T C K L A C T A V R | N C V M S L C S S p.840
. . . . . . g.64807
AGCTACAGTGAGTTAGGACTGCAGCTGATCATCGATGTGCTGACTCTGAGGAACAGTTCC c.2580
S Y S E L G L Q L I I D V L T L R N S S p.860
. . . . . | 20 . g.66230
TATTGGCTGGTGAGGACAGAGCTTCTGGAAACCCTTGCAGAGATTGACTTCAG | GCTGGTG c.2640
Y W L V R T E L L E T L A E I D F R | L V p.880
. . . . . | 21. g.66548
AGCTTTTTGGAGGCAAAAGCAGAAAACTTACACAGAGGGGCTCATCATTATACAGGG | CTT c.2700
S F L E A K A E N L H R G A H H Y T G | L p.900
. . . . . . g.66608
TTAAAACTGCAAGAACGAGTGCTCAATAATGTTGTCATCCATTTGCTTGGAGATGAAGAC c.2760
L K L Q E R V L N N V V I H L L G D E D p.920
. . . | 22 . . g.70851
CCCAGGGTGCGACATGTTGCCGCAGCATCACTAATTAG | GCTTGTCCCAAAGCTGTTTTAT c.2820
P R V R H V A A A S L I R | L V P K L F Y p.940
. . . . . . g.70911
AAATGTGACCAAGGACAAGCTGATCCAGTAGTGGCCGTGGCAAGAGATCAAAGCAGTGTT c.2880
K C D Q G Q A D P V V A V A R D Q S S V p.960
. . . . . . g.70971
TACCTGAAACTTCTCATGCATGAGACGCAGCCTCCATCTCATTTCTCCGTCAGCACAATA c.2940
Y L K L L M H E T Q P P S H F S V S T I p.980
| 23 . . . . . . g.73140
ACCAG | AATATATAGAGGCTATAACCTACTACCAAGCATAACAGACGTCACTATGGAAAAT c.3000
T R | I Y R G Y N L L P S I T D V T M E N p.1000
. . . . . . g.73200
AACCTTTCAAGAGTTATTGCAGCAGTTTCTCATGAACTAATCACATCAACCACCAGAGCA c.3060
N L S R V I A A V S H E L I T S T T R A p.1020
| 24 . . . . . . g.75525
CTCACA | TTTGGATGCTGTGAAGCTTTGTGTCTTCTTTCCACTGCCTTCCCAGTTTGCATT c.3120
L T | F G C C E A L C L L S T A F P V C I p.1040
. . | 25 . . . . g.77153
TGGAGTTTAGGTTGGCACTGTGG | AGTGCCTCCACTGAGTGCCTCAGATGAGTCTAGGAAG c.3180
W S L G W H C G | V P P L S A S D E S R K p.1060
. . . . . . g.77213
AGCTGTACCGTTGGGATGGCCACAATGATTCTGACCCTGCTCTCGTCAGCTTGGTTCCCA c.3240
S C T V G M A T M I L T L L S S A W F P p.1080
. . . . . | 26 . g.78329
TTGGATCTCTCAGCCCATCAAGATGCTTTGATTTTGGCCGGAAACTTGCTTGCAG | CCAGT c.3300
L D L S A H Q D A L I L A G N L L A A | S p.1100
. . . . . . g.78389
GCTCCCAAATCTCTGAGAAGTTCATGGGCCTCTGAAGAAGAAGCCAACCCAGCAGCCACC c.3360
A P K S L R S S W A S E E E A N P A A T p.1120
. . . . . . g.78449
AAGCAAGAGGAGGTCTGGCCAGCCCTGGGGGACCGGGCCCTGGTGCCCATGGTGGAGCAG c.3420
K Q E E V W P A L G D R A L V P M V E Q p.1140
. . . . . . g.78509
CTCTTCTCTCACCTGCTGAAGGTGATTAACATTTGTGCCCACGTCCTGGATGACGTGGCT c.3480
L F S H L L K V I N I C A H V L D D V A p.1160
. | 27 . . . . g.84654
CCTGGACCCGCAATAAAG | GCAGCCTTGCCTTCTCTAACAAACCCCCCTTCTCTAAGTCCC c.3540
P G P A I K | A A L P S L T N P P S L S P p.1180
. . . . . . g.84714
ATCCGACGAAAGGGGAAGGAGAAAGAACCAGGAGAACAAGCATCTGTACCGTTGAGTCCC c.3600
I R R K G K E K E P G E Q A S V P L S P p.1200
. . | 28 . . . . g.87426
AAGAAAGGCAGTGAGGCCAGTGCAG | CTTCTAGACAATCTGATACCTCAGGTCCTGTTACA c.3660
K K G S E A S A A | S R Q S D T S G P V T p.1220
. . . . . . g.87486
ACAAGTAAATCCTCATCACTGGGGAGTTTCTATCATCTTCCTTCATACCTCAAACTGCAT c.3720
T S K S S S L G S F Y H L P S Y L K L H p.1240
. . . | 29 . . . g.90628
GATGTCCTGAAAGCTACACACGCTAACTACAAG | GTCACGCTGGATCTTCAGAACAGCACG c.3780
D V L K A T H A N Y K | V T L D L Q N S T p.1260
. . . . . . g.90688
GAAAAGTTTGGAGGGTTTCTCCGCTCAGCCTTGGATGTTCTTTCTCAGATACTAGAGCTG c.3840
E K F G G F L R S A L D V L S Q I L E L p.1280
. . | 30 . . . . g.102675
GCCACACTGCAGGACATTGGGAAG | TGTGTTGAAGAGATCCTAGGATACCTGAAATCCTGC c.3900
A T L Q D I G K | C V E E I L G Y L K S C p.1300
. . . . | 31 . . g.103245
TTTAGTCGAGAACCAATGATGGCAACTGTTTGTGTTCAACAA | TTGTTGAAGACTCTCTTT c.3960
F S R E P M M A T V C V Q Q | L L K T L F p.1320
. . . . . . g.103305
GGCACAAACTTGGCCTCCCAGTTTGATGGCTTATCTTCCAACCCCAGCAAGTCACAAGGC c.4020
G T N L A S Q F D G L S S N P S K S Q G p.1340
. . . . . . g.103365
CGAGCACAGCGCCTTGGCTCCTCCAGTGTGAGGCCAGGCTTGTACCACTACTGCTTCATG c.4080
R A Q R L G S S S V R P G L Y H Y C F M p.1360
. . . . . . g.103425
GCCCCGTACACCCACTTCACCCAGGCCCTCGCTGACGCCAGCCTGAGGAACATGGTGCAG c.4140
A P Y T H F T Q A L A D A S L R N M V Q p.1380
. . | 32 . . . . g.105074
GCGGAGCAGGAGAACGACACCTCGGG | ATGGTTTGATGTCCTCCAGAAAGTGTCTACCCAG c.4200
A E Q E N D T S G | W F D V L Q K V S T Q p.1400
. . . . | 33 . . g.105280
TTGAAGACAAACCTCACGAGTGTCACAAAGAACCGTGCAGATAAG | AATGCTATTCATAAT c.4260
L K T N L T S V T K N R A D K | N A I H N p.1420
. . . . . . g.105340
CACATTCGTTTGTTTGAACCTCTTGTTATAAAAGCTTTAAAACAGTACACGACTACAACA c.4320
H I R L F E P L V I K A L K Q Y T T T T p.1440
. . . . . . g.105400
TGTGTGCAGTTACAGAAGCAGGTTTTAGATTTGCTGGCGCAGCTGGTTCAGTTACGGGTT c.4380
C V Q L Q K Q V L D L L A Q L V Q L R V p.1460
. . | 34. . . . g.107684
AATTACTGTCTTCTGGATTCAGATCAG | GTGTTTATTGGCTTTGTATTGAAACAGTTTGAA c.4440
N Y C L L D S D Q | V F I G F V L K Q F E p.1480
. . | 35 . . . . g.108654
TACATTGAAGTGGGCCAGTTCAG | GGAATCAGAGGCAATCATTCCAAACATCTTTTTCTTC c.4500
Y I E V G Q F R | E S E A I I P N I F F F p.1500
. . . . . . g.108714
TTGGTATTACTATCTTATGAACGCTATCATTCAAAACAGATCATTGGAATTCCTAAAATC c.4560
L V L L S Y E R Y H S K Q I I G I P K I p.1520
. . . . . | 36 . g.110842
ATTCAGCTCTGTGATGGCATCATGGCCAGTGGAAGGAAGGCTGTGACACATG | CCATACCG c.4620
I Q L C D G I M A S G R K A V T H A | I P p.1540
. . . . . . g.110902
GCTCTGCAGCCCATAGTCCACGACCTCTTTGTATTAAGAGGAACAAATAAAGCTGATGCA c.4680
A L Q P I V H D L F V L R G T N K A D A p.1560
. . . . . . g.110962
GGAAAAGAGCTTGAAACCCAAAAAGAGGTGGTGGTGTCAATGTTACTGAGACTCATCCAG c.4740
G K E L E T Q K E V V V S M L L R L I Q p.1580
| 37 . . . . . g.112724
TACCATCAG | GTGTTGGAGATGTTCATTCTTGTCCTGCAGCAGTGCCACAAGGAGAATGAA c.4800
Y H Q | V L E M F I L V L Q Q C H K E N E p.1600
. . . . . . g.112784
GACAAGTGGAAGCGACTGTCTCGACAGATAGCTGACATCATCCTCCCAATGTTAGCCAAA c.4860
D K W K R L S R Q I A D I I L P M L A K p.1620
| 38 . . . . . . g.116970
CAGCAG | ATGCACATTGACTCTCATGAAGCCCTTGGAGTGTTAAATACATTATTTGAGATT c.4920
Q Q | M H I D S H E A L G V L N T L F E I p.1640
. . . . . . g.117030
TTGGCCCCTTCCTCCCTCCGTCCGGTAGACATGCTTTTACGGAGTATGTTCGTCACTCCA c.4980
L A P S S L R P V D M L L R S M F V T P p.1660
| 39 . . . . . g.118021
AACACAATG | GCGTCCGTGAGCACTGTTCAACTGTGGATATCGGGAATTCTGGCCATTTTG c.5040
N T M | A S V S T V Q L W I S G I L A I L p.1680
. . . . . . g.118081
AGGGTTCTGATTTCCCAGTCAACTGAAGATATTGTTCTTTCTCGTATTCAGGAGCTCTCC c.5100
R V L I S Q S T E D I V L S R I Q E L S p.1700
. . . . . . g.118141
TTCTCTCCGTATTTAATCTCCTGTACAGTAATTAATAGGTTAAGAGATGGGGACAGTACT c.5160
F S P Y L I S C T V I N R L R D G D S T p.1720
. . . . . . g.118201
TCAACGCTAGAAGAACACAGTGAAGGGAAACAAATAAAGAATTTGCCAGAAGAAACATTT c.5220
S T L E E H S E G K Q I K N L P E E T F p.1740
| 40 . . . . . . g.119325
TCAAG | GTTTCTATTACAACTGGTTGGTATTCTTTTAGAAGACATTGTTACAAAACAGCTG c.5280
S R | F L L Q L V G I L L E D I V T K Q L p.1760
. . . . . . g.119385
AAGGTGGAAATGAGTGAGCAGCAACATACTTTCTATTGCCAGGAACTAGGCACACTGCTA c.5340
K V E M S E Q Q H T F Y C Q E L G T L L p.1780
. . | 41 . . . g.130083
ATGTGTCTGATCCACATCTTCAAGTCTG | GAATGTTCCGGAGAATCACAGCAGCTGCCACT c.5400
M C L I H I F K S G | M F R R I T A A A T p.1800
. . . . . . g.130143
AGGCTGTTCCGCAGTGATGGCTGTGGCGGCAGTTTCTACACCCTGGACAGCTTGAACTTG c.5460
R L F R S D G C G G S F Y T L D S L N L p.1820
. . . . . . g.130203
CGGGCTCGTTCCATGATCACCACCCACCCGGCCCTGGTGCTGCTCTGGTGTCAGATACTG c.5520
R A R S M I T T H P A L V L L W C Q I L p.1840
. . . . . | 42 . g.134330
CTGCTTGTCAACCACACCGACTACCGCTGGTGGGCAGAAGTGCAGCAGACCCCGAA | AAGA c.5580
L L V N H T D Y R W W A E V Q Q T P K | R p.1860
. . . . . . g.134390
CACAGTCTGTCCAGCACAAAGTTACTTAGTCCCCAGATGTCTGGAGAAGAGGAGGATTCT c.5640
H S L S S T K L L S P Q M S G E E E D S p.1880
. . . . . . g.134450
GACTTGGCAGCCAAACTTGGAATGTGCAATAGAGAAATAGTACGAAGAGGGGCTCTCATT c.5700
D L A A K L G M C N R E I V R R G A L I p.1900
. | 43 . . . . g.136857
CTCTTCTGTGATTATGTC | TGTCAGAACCTCCATGACTCCGAGCACTTAACGTGGCTCATT c.5760
L F C D Y V | C Q N L H D S E H L T W L I p.1920
. . . . . . g.136917
GTAAATCACATTCAAGATCTGATCAGCCTTTCCCACGAGCCTCCAGTACAGGACTTCATC c.5820
V N H I Q D L I S L S H E P P V Q D F I p.1940
. . . . . . g.136977
AGTGCCGTTCATCGGAACTCTGCTGCCAGCGGCCTGTTCATCCAGGCAATTCAGTCTCGT c.5880
S A V H R N S A A S G L F I Q A I Q S R p.1960
. | 44 . . . . g.137168
TGTGAAAACCTTTCAACT | CCAACCATGCTGAAGAAAACTCTTCAGTGCTTGGAGGGGATC c.5940
C E N L S T | P T M L K K T L Q C L E G I p.1980
. . . . . . g.137228
CATCTCAGCCAGTCGGGAGCTGTGCTCACGCTGTATGTGGACAGGCTTCTGTGCACCCCT c.6000
H L S Q S G A V L T L Y V D R L L C T P p.2000
. . . . . . g.137288
TTCCGTGTGCTGGCTCGCATGGTCGACATCCTTGCTTGTCGCCGGGTAGAAATGCTTCTG c.6060
F R V L A R M V D I L A C R R V E M L L p.2020
. | 45 . . . . . g.137645
GCTGCAAATTTACAG | AGCAGCATGGCCCAGTTGCCAATGGAAGAACTCAACAGAATCCAG c.6120
A A N L Q | S S M A Q L P M E E L N R I Q p.2040
. . . | 46 . . . g.139120
GAATACCTTCAGAGCAGCGGGCTCGCTCAGAG | ACACCAAAGGCTCTATTCCCTGCTGGAC c.6180
E Y L Q S S G L A Q R | H Q R L Y S L L D p.2060
. . . . . . g.139180
AGGTTTCGTCTCTCCACCATGCAAGACTCACTTAGTCCCTCTCCTCCAGTCTCTTCCCAC c.6240
R F R L S T M Q D S L S P S P P V S S H p.2080
. . . . . | 47 . g.140155
CCGCTGGACGGGGATGGGCACGTGTCACTGGAAACAGTGAGTCCGGACAAA | GACTGGTAC c.6300
P L D G D G H V S L E T V S P D K | D W Y p.2100
. . . . . . g.140215
GTTCATCTTGTCAAATCCCAGTGTTGGACCAGGTCAGATTCTGCACTGCTGGAAGGTGCA c.6360
V H L V K S Q C W T R S D S A L L E G A p.2120
. . . . . | 48 . g.142254
GAGCTGGTGAATCGGATTCCTGCTGAAGATATGAATGCCTTCATGATGAACTCG | GAGTTC c.6420
E L V N R I P A E D M N A F M M N S | E F p.2140
. . . . . . g.142314
AACCTAAGCCTGCTAGCTCCATGCTTAAGCCTAGGGATGAGTGAAATTTCTGGTGGCCAG c.6480
N L S L L A P C L S L G M S E I S G G Q p.2160
. . . . . . g.142374
AAGAGTGCCCTTTTTGAAGCAGCCCGTGAGGTGACTCTGGCCCGTGTGAGCGGCACCGTG c.6540
K S A L F E A A R E V T L A R V S G T V p.2180
. . . . . . g.142434
CAGCAGCTCCCTGCTGTCCATCATGTCTTCCAGCCCGAGCTGCCTGCAGAGCCGGCGGCC c.6600
Q Q L P A V H H V F Q P E L P A E P A A p.2200
. . | 49 . . . g.142915
TACTGGAGCAAGTTGAATGATCTGTTTG | GGGATGCTGCACTGTATCAGTCCCTGCCCACT c.6660
Y W S K L N D L F G | D A A L Y Q S L P T p.2220
. . . . . . g.142975
CTGGCCCGGGCCCTGGCACAGTACCTGGTGGTGGTCTCCAAACTGCCCAGTCATTTGCAC c.6720
L A R A L A Q Y L V V V S K L P S H L H p.2240
. . . . . | 50 . g.144283
CTTCCTCCTGAGAAAGAGAAGGACATTGTGAAATTCGTGGTGGCAACCCTTGAG | GCCCTG c.6780
L P P E K E K D I V K F V V A T L E | A L p.2260
. . . . . . g.144343
TCCTGGCATTTGATCCATGAGCAGATCCCGCTGAGTCTGGATCTCCAGGCAGGGCTGGAC c.6840
S W H L I H E Q I P L S L D L Q A G L D p.2280
. . . . . . g.144403
TGCTGCTGCCTGGCCCTGCAGCTGCCTGGCCTCTGGAGCGTGGTCTCCTCCACAGAGTTT c.6900
C C C L A L Q L P G L W S V V S S T E F p.2300
. . . . . | 51 . g.145437
GTGACCCACGCCTGCTCCCTCATCTACTGTGTGCACTTCATCCTGGAGGCCG | TTGCAGTG c.6960
V T H A C S L I Y C V H F I L E A V | A V p.2320
. . . . . . g.145497
CAGCCTGGAGAGCAGCTTCTTAGTCCAGAAAGAAGGACAAATACCCCAAAAGCCATCAGC c.7020
Q P G E Q L L S P E R R T N T P K A I S p.2340
. . . | 52 . . . g.148110
GAGGAGGAGGAGGAAGTAGATCCAAACACACAGA | ATCCTAAGTATATCACTGCAGCCTGT c.7080
E E E E E V D P N T Q N | P K Y I T A A C p.2360
. . . . . . g.148170
GAGATGGTGGCAGAAATGGTGGAGTCTCTGCAGTCGGTGTTGGCCTTGGGTCATAAAAGG c.7140
E M V A E M V E S L Q S V L A L G H K R p.2380
. . . . . . g.148230
AATAGCGGCGTGCCGGCGTTTCTCACGCCATTGCTAAGGAACATCATCATCAGCCTGGCC c.7200
N S G V P A F L T P L L R N I I I S L A p.2400
. . . . | 53 . . g.150519
CGCCTGCCCCTTGTCAACAGCTACACACGTGTGCCCCCACTG | GTGTGGAAGCTTGGATGG c.7260
R L P L V N S Y T R V P P L | V W K L G W p.2420
. . . . . . g.150579
TCACCCAAACCGGGAGGGGATTTTGGCACAGCATTCCCTGAGATCCCCGTGGAGTTCCTC c.7320
S P K P G G D F G T A F P E I P V E F L p.2440
. . . . | 54 . g.152717
CAGGAAAAGGAAGTCTTTAAGGAGTTCATCTACCGCATCAACACACTAG | GCTGGACCAGT c.7380
Q E K E V F K E F I Y R I N T L G | W T S p.2460
. . . . . . g.152777
CGTACTCAGTTTGAAGAAACTTGGGCCACCCTCCTTGGTGTCCTGGTGACGCAGCCCCTC c.7440
R T Q F E E T W A T L L G V L V T Q P L p.2480
. . . | 55 . . . g.153755
GTGATGGAGCAGGAGGAGAGCCCACCAGAA | GAAGACACAGAGAGGACCCAGATCAACGTC c.7500
V M E Q E E S P P E | E D T E R T Q I N V p.2500
. . . . . . g.153815
CTGGCCGTGCAGGCCATCACCTCACTGGTGCTCAGTGCAATGACTGTGCCTGTGGCCGGC c.7560
L A V Q A I T S L V L S A M T V P V A G p.2520
. . . . . . g.153875
AACCCAGCTGTAAGCTGCTTGGAGCAGCAGCCCCGGAACAAGCCTCTGAAAGCTCTCGAC c.7620
N P A V S C L E Q Q P R N K P L K A L D p.2540
| 56 . . . . . . g.154366
ACCAG | GTTTGGGAGGAAGCTGAGCATTATCAGAGGGATTGTGGAGCAAGAGATTCAAGCA c.7680
T R | F G R K L S I I R G I V E Q E I Q A p.2560
. . . . . . g.154426
ATGGTTTCAAAGAGAGAGAATATTGCCACCCATCATTTATATCAGGCATGGGATCCTGTC c.7740
M V S K R E N I A T H H L Y Q A W D P V p.2580
. . | 57 . . . . g.156015
CCTTCTCTGTCTCCGGCTACTACAG | GTGCCCTCATCAGCCACGAGAAGCTGCTGCTACAG c.7800
P S L S P A T T G | A L I S H E K L L L Q p.2600
. . . . | 58 . g.158946
ATCAACCCCGAGCGGGAGCTGGGGAGCATGAGCTACAAACTCGGCCAG | GTGTCCATACAC c.7860
I N P E R E L G S M S Y K L G Q | V S I H p.2620
. . . . . . g.159006
TCCGTGTGGCTGGGGAACAGCATCACACCCCTGAGGGAGGAGGAATGGGACGAGGAAGAG c.7920
S V W L G N S I T P L R E E E W D E E E p.2640
. . . . . | 59 g.159200
GAGGAGGAGGCCGACGCCCCTGCACCTTCGTCACCACCCACGTCTCCAGTCAACTCCAG | G c.7980
E E E A D A P A P S S P P T S P V N S R | p.2660
. . . . . . g.159260
AAACACCGGGCTGGAGTTGACATCCACTCCTGTTCGCAGTTTTTGCTTGAGTTGTACAGC c.8040
K H R A G V D I H S C S Q F L L E L Y S p.2680
. . . . . . g.159320
CGCTGGATCCTGCCGTCCAGCTCAGCCAGGAGGACCCCGGCCATCCTGATCAGTGAGGTG c.8100
R W I L P S S S A R R T P A I L I S E V p.2700
| 60 . . . . . g.160257
GTCAGATCC | CTTCTAGTGGTCTCAGACTTGTTCACCGAGCGCAACCAGTTTGAGCTGATG c.8160
V R S | L L V V S D L F T E R N Q F E L M p.2720
. . . . . . g.160317
TATGTGACGCTGACAGAACTGCGAAGGGTGCACCCTTCAGAAGACGAGATCCTCGCTCAG c.8220
Y V T L T E L R R V H P S E D E I L A Q p.2740
. . . . | 61 . . g.163497
TACCTGGTGCCTGCCACCTGCAAGGCAGCTGCCGTCCTTGGGATG | GACAAGGCCGTGGCG c.8280
Y L V P A T C K A A A V L G M | D K A V A p.2760
. . . . . . g.163557
GAGCCTGTCAGCCGCCTGCTGGAGAGCACGCTCAGGAGCAGCCACCTGCCCAGCAGGGTT c.8340
E P V S R L L E S T L R S S H L P S R V p.2780
. . . . . . g.163617
GGAGCCCTGCACGGCGTCCTCTATGTGCTGGAGTGCGACCTGCTGGACGACACTGCCAAG c.8400
G A L H G V L Y V L E C D L L D D T A K p.2800
. . . . . | 62 . g.165607
CAGCTCATCCCGGTCATCAGCGACTATCTCCTCTCCAACCTGAAAGGGATCGCCCA | CTGC c.8460
Q L I P V I S D Y L L S N L K G I A H | C p.2820
. . . . . . g.165667
GTGAACATTCACAGCCAGCAGCACGTACTGGTCATGTGTGCCACTGCGTTTTACCTCATT c.8520
V N I H S Q Q H V L V M C A T A F Y L I p.2840
. . . . . | 63 . g.165893
GAGAACTATCCTCTGGACGTAGGGCCGGAATTTTCAGCATCAATAATACAG | ATGTGTGGG c.8580
E N Y P L D V G P E F S A S I I Q | M C G p.2860
. . . . . . g.165953
GTGATGCTGTCTGGAAGTGAGGAGTCCACCCCCTCCATCATTTACCACTGTGCCCTCAGA c.8640
V M L S G S E E S T P S I I Y H C A L R p.2880
. . . . . . g.166013
GGCCTGGAGCGCCTCCTGCTCTCTGAGCAGCTCTCCCGCCTGGATGCAGAATCGCTGGTC c.8700
G L E R L L L S E Q L S R L D A E S L V p.2900
. . . . . . g.166073
AAGCTGAGTGTGGACAGAGTGAACGTGCACAGCCCGCACCGGGCCATGGCGGCTCTGGGC c.8760
K L S V D R V N V H S P H R A M A A L G p.2920
. . | 64 . . . . g.166503
CTGATGCTCACCTGCATGTACACAG | GAAAGGAGAAAGTCAGTCCGGGTAGAACTTCAGAC c.8820
L M L T C M Y T G | K E K V S P G R T S D p.2940
. . . . . . g.166563
CCTAATCCTGCAGCCCCCGACAGCGAGTCAGTGATTGTTGCTATGGAGCGGGTATCTGTT c.8880
P N P A A P D S E S V I V A M E R V S V p.2960
. | 65 . . . . . g.168815
CTTTTTGATAG | GATCAGGAAAGGCTTTCCTTGTGAAGCCAGAGTGGTGGCCAGGATCCTG c.8940
L F D R | I R K G F P C E A R V V A R I L p.2980
. . . . . . g.168875
CCCCAGTTTCTAGACGACTTCTTCCCACCCCAGGACATCATGAACAAAGTCATCGGAGAG c.9000
P Q F L D D F F P P Q D I M N K V I G E p.3000
. . . . . | 66 . g.169143
TTTCTGTCCAACCAGCAGCCATACCCCCAGTTCATGGCCACCGTGGTGTATAAG | GTGTTT c.9060
F L S N Q Q P Y P Q F M A T V V Y K | V F p.3020
. . . . . . g.169203
CAGACTCTGCACAGCACCGGGCAGTCGTCCATGGTCCGGGACTGGGTCATGCTGTCCCTC c.9120
Q T L H S T G Q S S M V R D W V M L S L p.3040
. . . . . . g.169263
TCCAACTTCACGCAGAGGGCCCCGGTCGCCATGGCCACGTGGAGCCTCTCCTGCTTCTTT c.9180
S N F T Q R A P V A M A T W S L S C F F p.3060
. . . | 67 . . . g.170190
GTCAGCGCGTCCACCAGCCCGTGGGTCGCGGCGAT | CCTCCCACATGTCATCAGCAGGATG c.9240
V S A S T S P W V A A I | L P H V I S R M p.3080
. . . . . . g.170250
GGCAAGCTGGAGCAGGTGGACGTGAACCTTTTCTGCCTGGTCGCCACAGACTTCTACAGA c.9300
G K L E Q V D V N L F C L V A T D F Y R p.3100
. . . . . . g.170310
CACCAGATAGAGGAGGAGCTCGACCGCAGGGCCTTCCAGTCTGTGCTTGAGGTGGTTGCA c.9360
H Q I E E E L D R R A F Q S V L E V V A p.3120
. . . . . . g.170370
GCCCCAGGAAGCCCATATCACCGGCTGCTGACTTGTTTACGAAATGTCCACAAGGTCACC c.9420
A P G S P Y H R L L T C L R N V H K V T p.3140
g.170379
ACCTGCTGA c.9429
T C X p.3142
. . . . . . g.170439
gcgccatggtgggagagactgtgaggcggcagctggggccggagcctttggaagtctgcg c.*60
. . . . . . g.170499
cccttgtgccctgcctccaccgagccagcttggtccctatgggcttccgcacatgccgcg c.*120
. . . . . . g.170559
ggcggccaggcaacgtgcgtgtctctgccatgtggcagaagtgctctttgtggcagtggc c.*180
. . . . . . g.170619
caggcagggagtgtctgcagtcctggtggggctgagcctgaggccttccagaaagcagga c.*240
. . . . . . g.170679
gcagctgtgctgcaccccatgtgggtgaccaggtcctttctcctgatagtcacctgctgg c.*300
. . . . . . g.170739
ttgttgccaggttgcagctgctcttgcatctgggccagaagtcctccctcctgcaggctg c.*360
. . . . . . g.170799
gctgttggcccctctgctgtcctgcagtagaaggtgccgtgagcaggctttgggaacact c.*420
. . . . . . g.170859
ggcctgggtctccctggtggggtgtgcatgccacgccccgtgtctggatgcacagatgcc c.*480
. . . . . . g.170919
atggcctgtgctgggccagtggctgggggtgctagacacccggcaccattctcccttctc c.*540
. . . . . . g.170979
tcttttcttctcaggatttaaaatttaattatatcagtaaagagattaattttaacgtaa c.*600
. . . . . . g.171039
ctctttctatgcccgtgtaaagtatgtgaatcgcaaggcctgtgctgcatgcgacagcgt c.*660
. . . . . . g.171099
ccggggtggtggacagggcccccggccacgctccctctcctgtagccactggcatagccc c.*720
. . . . . . g.171159
tcctgagcacccgctgacatttccgttgtacatgttcctgtttatgcattcacaaggtga c.*780
. . . . . . g.171219
ctgggatgtagagaggcgttagtgggcaggtggccacagcaggactgaggacaggccccc c.*840
. . . . . . g.171279
attatcctaggggtgcgctcacctgcagcccctcctcctcgggcacagacgactgtcgtt c.*900
. . . . . . g.171339
ctccacccaccagtcagggacagcagcctccctgtcactcagctgagaaggccagccctc c.*960
. . . . . . g.171399
cctggctgtgagcagcctccactgtgtccagagacatgggcctcccactcctgttccttg c.*1020
. . . . . . g.171459
ctagccctggggtggcgtctgcctaggagctggctggcaggtgttgggacctgctgctcc c.*1080
. . . . . . g.171519
atggatgcatgccctaagagtgtcactgagctgtgttttgtctgagcctctctcggtcaa c.*1140
. . . . . . g.171579
cagcaaagcttggtgtcttggcactgttagtgacagagcccagcatcccttctgcccccg c.*1200
. . . . . . g.171639
ttccagctgacatcttgcacggtgaccccttttagtcaggagagtgcagatctgtgctca c.*1260
. . . . . . g.171699
tcggagactgccccacggccctgtcagagccgccactcctatccccaggccaggtccctg c.*1320
. . . . . . g.171759
gaccagcctcctgtttgcaggcccagaggagccaagtcattaaaatggaagtggattctg c.*1380
. . . . . . g.171819
gatggccgggctgctgctgatgtaggagctggatttgggagctctgcttgccgactggct c.*1440
. . . . . . g.171879
gtgagacgaggcaggggctctgcttcctcagccctagaggcgagccaggcaaggttggcg c.*1500
. . . . . . g.171939
actgtcatgtggcttggtttggtcatgcccgtcgatgttttgggtattgaatgtggtaag c.*1560
. . . . . . g.171999
tggaggaaatgttggaactctgtgcaggtgctgccttgagacccccaagcttccacctgt c.*1620
. . . . . . g.172059
ccctctcctatgtggcagctggggagcagctgagatgtggacttgtatgctgcccacata c.*1680
. . . . . . g.172119
cgtgagggggagctgaaagggagcccctcctctgagcagcctctgccaggcctgtatgag c.*1740
. . . . . . g.172179
gcttttcccaccagctcccaacagaggcctcccccagccaggaccacctcgtcctcgtgg c.*1800
. . . . . . g.172239
cggggcagcaggagcggtagaaaggggtccgatgtttgaggaggcccttaagggaagcta c.*1860
. . . . . . g.172299
ctgaattataacacgtaagaaaatcaccattccgtattggttgggggctcctgtttctca c.*1920
. . . . . . g.172359
tcctagctttttcctggaaagcccgctagaaggtttgggaacgaggggaaagttctcaga c.*1980
. . . . . . g.172419
actgttggctgctccccacccgcctcccgcctcccccgcaggttatgtcagcagctctga c.*2040
. . . . . . g.172479
gacagcagtatcacaggccagatgttgttcctggctagatgtttacatttgtaagaaata c.*2100
. . . . . . g.172539
acactgtgaatgtaaaacagagccattcccttggaatgcatatcgctgggctcaacatag c.*2160
. . . . . . g.172599
agtttgtcttcctcttgtttacgacgtgatctaaaccagtccttagcaaggggctcagaa c.*2220
. . . . . . g.172659
caccccgctctggcagtaggtgtcccccacccccaaagacctgcctgtgtgctccggaga c.*2280
. . . . . . g.172719
tgaatatgagctcattagtaaaaatgacttcacccacgcatatacataaagtatccatgc c.*2340
. . . . . . g.172779
atgtgcatatagacacatctataattttacacacacacctctcaagacggagatgcatgg c.*2400
. . . . . . g.172839
cctctaagagtgcccgtgtcggttcttcctggaagttgactttccttagacccgccaggt c.*2460
. . . . . . g.172899
caagttagccgcgtgacggacatccaggcgtgggacgtggtcagggcagggctcattcat c.*2520
. . . . . . g.172959
tgcccactaggatcccactggcgaagatggtctccatatcagctctctgcagaagggagg c.*2580
. . . . . . g.173019
aagactttatcatgttcctaaaaatctgtggcaagcacccatcgtattatccaaattttg c.*2640
. . . . . . g.173079
ttgcaaatgtgattaatttggttgtcaagttttgggggtgggctgtggggagattgcttt c.*2700
. . . . . . g.173139
tgttttcctgctggtaatatcgggaaagattttaatgaaaccagggtagaattgtttggc c.*2760
. . . . . . g.173199
aatgcactgaagcgtgtttctttcccaaaatgtgcctcccttccgctgcgggcccagctg c.*2820
. . . . . . g.173259
agtctatgtaggtgatgtttccagctgccaagtgctctttgttactgtccaccctcattt c.*2880
. . . . . . g.173319
ctgccagcgcatgtgtcctttcaaggggaaaatgtgaagctgaaccccctccagacaccc c.*2940
. . . . . . g.173379
agaatgtagcatctgagaaggccctgtgccctaaaggacacccctcgcccccatcttcat c.*3000
. . . . . . g.173439
ggagggggtcatttcagagccctcggagccaatgaacagctcctcctcttggagctgaga c.*3060
. . . . . . g.173499
tgagccccacgtggagctcgggacggatagtagacagcaataactcggtgtgtggccgcc c.*3120
. . . . . . g.173559
tggcaggtggaacttcctcccgttgcggggtggagtgaggttagttctgtgtgtctggtg c.*3180
. . . . . . g.173619
ggtggagtcaggcttctcttgctacctgtgagcatccttcccagcagacatcctcatcgg c.*3240
. . . . . . g.173679
gctttgtccctcccccgcttcctccctctgcggggaggacccgggaccacagctgctggc c.*3300
. . . . . . g.173739
cagggtagacttggagctgtcctccagaggggtcacgtgtaggagtgagaagaaggaaga c.*3360
. . . . . . g.173799
tcttgagagctgctgagggaccttggagagctcaggatggctcagacgaggacactcgct c.*3420
. . . . . . g.173859
tgccgggcctgggcctcctgggaaggagggagctgctcagaatgccgcatgacaactgaa c.*3480
. . . . . . g.173919
ggcaacctggaaggttcaggggccgctcttcccccatgtgcctgtcacgctctggtgcag c.*3540
. . . . . . g.173979
tcaaaggaacgccttcccctcagttgtttctaagagcagagtctcccgctgcaatctggg c.*3600
. . . . . . g.174039
tggtaactgccagccttggaggatcgtggccaacgtggacctgcctacggagggtgggct c.*3660
. . . . . . g.174099
ctgacccaagtggggcctccttgtccaggtctcactgctttgcaccgtggtcagagggac c.*3720
. . . . . . g.174159
tgtcagctgagcttgagctcccctggagccagcagggctgtgatgggcgagtcccggagc c.*3780
. . . . . . g.174219
cccacccagacctgaatgcttctgagagcaaagggaaggactgacgagagatgtatattt c.*3840
. . . . . . g.174279
aattttttaactgctgcaaacattgtacatccaaattaaaggaaaaaaatggaaaccatc c.*3900
g.174280
a c.*3901
(downstream sequence)
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