jagged 1 (JAG1) - 8686 nt intron 02 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.6406
gtgagtgactactcgggaaggaggccgggcggagcctcacacccgcgcctggccgagccc  c.387+60

         .         .         .         .         .         .  g.6466
tgttatcccttgcgagagggatttaaagggctttggcttgaaactaggcgctaactgggg  c.387+120

         .         .         .         .         .         .  g.6526
aaatctctaggggtggcgggtgagggagccgggacactatagttagatctcggctggggt  c.387+180

         .         .         .         .         .         .  g.6586
agtcgaggtgggtcccattcctgctgctatttgcttagtgcacaaaagtggggatcccag  c.387+240

         .         .         .         .         .         .  g.6646
agggtttatgggaccaggctcctaggaaggccggtgtaaacttgcaacttgaagttccca  c.387+300

         .         .         .         .         .         .  g.6706
gagtaactctcccggccccaagccaagagatcgttgtagctgatctctttgcttaactaa  c.387+360

         .         .         .         .         .         .  g.6766
ttaaacctggtgcgccgtggaaggcgactcggcgcagttctggcctgcgaacgccgtcca  c.387+420

         .         .         .         .         .         .  g.6826
aattggcaacctcccctttcccgtgaacggccgggagggcgggtgtgtccttcctggagg  c.387+480

         .         .         .         .         .         .  g.6886
gtgtgggggagtccgtttcccgctgctccccgggagattttagtgtgtgcgggggcgctc  c.387+540

         .         .         .         .         .         .  g.6946
tccaggttcggcttaagggccgggggcggccgccgcaggaggaggttcttggggccctca  c.387+600

         .         .         .         .         .         .  g.7006
caggagctgtagacctgggaacccccgcccgctgctggccccttcctgcccccgcccccg  c.387+660

         .         .         .         .         .         .  g.7066
agtggtgtagctcttgtggcctcacttccagcggttcccgggctctggaacagctgtgtt  c.387+720

         .         .         .         .         .         .  g.7126
tgcagacttccccgggaagggcgggtgcacggcccccgcaagccttcgggggccgtgcca  c.387+780

         .         .         .         .         .         .  g.7186
aggcttggaaggggtggtcttctggaggtagtgcctgagggtgtaagtgataggccctca  c.387+840

         .         .         .         .         .         .  g.7246
tccccccgccccattccgcccccaaaggagctcgaggcccgggcccagctggcagatcct  c.387+900

         .         .         .         .         .         .  g.7306
gcagcgaggcccttgcaacatcccaaaatgggtggaaggaagatgggtgcgattgcagaa  c.387+960

         .         .         .         .         .         .  g.7366
ggggaggaaagggaaatgttgggggtgtgccctctgcctggctcctgctgtccaggaggc  c.387+1020

         .         .         .         .         .         .  g.7426
atgactcattgccaagactggggcttggcctagcctgtgctgggagggtgggtggtgaga  c.387+1080

         .         .         .         .         .         .  g.7486
gggggagctcggtgccccagagcattgctttccaccacgtgctctaatggggtgcactct  c.387+1140

         .         .         .         .         .         .  g.7546
gctgcctcctgtccgccggcttaggttgtgattctgggaggagacagaggggagactatc  c.387+1200

         .         .         .         .         .         .  g.7606
tggctgtgtctgtgtatgaagcttggggtggctcttaaaatccacgattacaggagctgg  c.387+1260

         .         .         .         .         .         .  g.7666
cattataaagtgccctctgctgtgggtgagataagacagttatcaaaaactgccatgaaa  c.387+1320

         .         .         .         .         .         .  g.7726
aggggtttataaaaagaaaaattaaaaccaacgctgtctgtgaagctctcttgaggtcca  c.387+1380

         .         .         .         .         .         .  g.7786
agggctgtttctgttgtgggatttcatttttaccaagagtatttatcttgtttgttaatc  c.387+1440

         .         .         .         .         .         .  g.7846
ccctattagggagaactttaagctaaagagtctggctgcgtttaaatctggctggcccaa  c.387+1500

         .         .         .         .         .         .  g.7906
gctgactgtgaatactcaaactgcccttgaacgtgtgtttggagtttagggggaaggggc  c.387+1560

         .         .         .         .         .         .  g.7966
ctgcaggtggttccaccctcctgccggaggatctgtctggagcccctcgcttttcacaag  c.387+1620

         .         .         .         .         .         .  g.8026
accataaaaggaatcttattagtgatgtggaaaagcagcagcctggctgaggctcatttt  c.387+1680

         .         .         .         .         .         .  g.8086
ggagagtagggtcagagggatggctaacatgaaaacaaggaggcttgctccctcgctggc  c.387+1740

         .         .         .         .         .         .  g.8146
caaggaaaagtgacctagaaaagtgcgtctgtccgcttttgacacttggtcagagtcctc  c.387+1800

         .         .         .         .         .         .  g.8206
aatggaaaacgagcggaaatagtgtgggagggtaggagaggcgattgatttgcatttgct  c.387+1860

         .         .         .         .         .         .  g.8266
ggtgctcttctgtggtttcaggccccacgggtcaccaaccatgaaatagactctcggctt  c.387+1920

         .         .         .         .         .         .  g.8326
ttctcgaatgggggaagaccgatggggcaccactgaaaatgtggttcttttgaagttggg  c.387+1980

         .         .         .         .         .         .  g.8386
acaaacgcatgtatcactcataaacaagtctccaccctgatgccccagaaaggcctgctg  c.387+2040

         .         .         .         .         .         .  g.8446
tgaaacataagatttaattctcaagagaaattggagtttaggtgtatttgtttttctgta  c.387+2100

         .         .         .         .         .         .  g.8506
tgtggttggagaaacggcacagtccgtaactttcaagaatgattccaggctgagtagaaa  c.387+2160

         .         .         .         .         .         .  g.8566
cgtaactgaaacacttaagtagctgagcgagtatttaactagagggcacagcttcattta  c.387+2220

         .         .         .         .         .         .  g.8626
gtttggcaattaactatgtcttttaaaactgatttccttgaatgggaaataaatgaactt  c.387+2280

         .         .         .         .         .         .  g.8686
agtacagaattcaagagatagcaagaaaaggatatatggttaaaaacaaaacaaaactcc  c.387+2340

         .         .         .         .         .         .  g.8746
aaaccaccttgggctcccaacccctagcaggcacaattaccatttgcatgagtcctccca  c.387+2400

         .         .         .         .         .         .  g.8806
aatttgctgacgctgggtatcagcaaagggtgcaggggtaggtcagtgtagaaggtcatg  c.387+2460

         .         .         .         .         .         .  g.8866
tagttcatgctttttgtttggaattatgacccctatccaagcaactgttcatgttctaga  c.387+2520

         .         .         .         .         .         .  g.8926
gaggacgaggaggaaacgatttggtcagatatgaaatacagtccatgttctggtgtgcat  c.387+2580

         .         .         .         .         .         .  g.8986
gtgaaaggctttgtagaggtggcccttcctgtcatatatcatatctgagtatgtcccacg  c.387+2640

         .         .         .         .         .         .  g.9046
tggtgtcccctgccccggctctggtcttggggtagtttttcaccactggcttctaattct  c.387+2700

         .         .         .         .         .         .  g.9106
catactgttgctgctctaaggggcttaacttgcagcaactatctggattaatgattctca  c.387+2760

         .         .         .         .         .         .  g.9166
aattgggggaccaagtgataagaaccattattgtgggaagtaattgggcttaacaggaaa  c.387+2820

         .         .         .         .         .         .  g.9226
taatttaggaattaccacttataaatcactgaaacggttaatctgtacctcccaaaatta  c.387+2880

         .         .         .         .         .         .  g.9286
gtgctaaatcccagtagtgcctgcttattaaaaatacattagtgtaattaccactactca  c.387+2940

         .         .         .         .         .         .  g.9346
tctccaaaagctttttgggaacttcagaaccccagttagctgtattgctgcatcggtggc  c.387+3000

         .         .         .         .         .         .  g.9406
cccagagtgaaatgaatctagagaaacgttaggggaagaaattggggtatctggcttatt  c.387+3060

         .         .         .         .         .         .  g.9466
agcctcatatttaaattccattgatcctattaaaagacttgctgagatcaactttttttt  c.387+3120

         .         .         .         .         .         .  g.9526
tttttttttttttttttttttttttttttttttggaaaatccaatgaaacgtgattcttc  c.387+3180

         .         .         .         .         .         .  g.9586
tgtgtgagggatgccagctttggcccccttcatgcttcaggcctgaatgaccaattgcca  c.387+3240

         .         .         .         .         .         .  g.9646
cgatgctaatcacagaatgtaattgacaggcccttacttttatgccttttgctgtctttt  c.387+3300

         .         .         .         .         .         .  g.9706
ccagtccctgagcttctgtagatatggtgtgggcacatggagggcttaaggatggggttc  c.387+3360

         .         .         .         .         .         .  g.9766
tgatttgacctgcctcctttctgcagccaggatttgcatcctgcccgtgtagtcagcatg  c.387+3420

         .         .         .         .         .         .  g.9826
tatacaaagaaagagcatgtgtgtacgtatgtgctcagagcaagggactttctgcatgtg  c.387+3480

         .         .         .         .         .         .  g.9886
gagaaaacgccttttgccctaagaagtctacctcaaaccaaagggatgaagtgatgtatc  c.387+3540

         .         .         .         .         .         .  g.9946
tgtgttgcaacactgggcttgggggaaagtgaagctgtgcttgctttgaaagagctgtgc  c.387+3600

         .         .         .         .         .         .  g.10006
taagtatctgcagaatagctgctccaaaaatggaatctttattccaggtacttggtttct  c.387+3660

         .         .         .         .         .         .  g.10066
aatttttttttctcttgcaggtgtaaccttctgtgttttctttctccttgttgtcttgtt  c.387+3720

         .         .         .         .         .         .  g.10126
tcttagcaacttattcaaacctccagtacttataggaatttgcaacccaccagttccaca  c.387+3780

         .         .         .         .         .         .  g.10186
cccgtaattctacagggacttaagatgtttttagaaaacggtgaaactttggcgtggagg  c.387+3840

         .         .         .         .         .         .  g.10246
ctcttgggggagttcagtgggttaaaaggagagtcagcagcaacttacaggcatgcaacc  c.387+3900

         .         .         .         .         .         .  g.10306
tcccagaaaatcagcaatctaagtgctgctcaaaatcttcacaccaaatagtggtgcctt  c.387+3960

         .         .         .         .         .         .  g.10366
tggggaccttttagatagaagacgtggaaagtttagcatggagaaaaaagttacttaaaa  c.387+4020

         .         .         .         .         .         .  g.10426
aaaaaaaaacagtgtcaaggtaacaaggagccttcacagttcctgatctgaaaacaggaa  c.387+4080

         .         .         .         .         .         .  g.10486
tgtgaaccagaggccttggctggattcatatcacccactggccccattgtagaagggcca  c.387+4140

         .         .         .         .         .         .  g.10546
gaagttggtcccaatgtccggctttcaaggttagtgacaatgtaagaatgcatgatctct  c.387+4200

         .         .         .         .         .         .  g.10606
ggatgtgcatacaattagcgttgtaatccataaatgcaaatactcctgcaaattcttcca  c.387+4260

         .         .         .         .         .         .  g.10666
tggtaaacttctgtaaggcatgttgctcttccacctacccccatccttcaagcctaggat  c.387+4320

         .         .     g.10689
ctaggctgctgagagaagtgact  c.387+4343

--------------------- middle of intron ---------------------
                         g.10690        .         .           g.10712
                         c.388-4343  cttggcttcagcttttaaatata  c.388-4321

.         .         .         .         .         .           g.10772
tatatatctctcaaaacttaatcttttcttccaactgttggaagatacattgggatgaat  c.388-4261

.         .         .         .         .         .           g.10832
ggaaagtggtgattctaaaatggtggtggaaatggaggagggtcctgggttcagaaaaat  c.388-4201

.         .         .         .         .         .           g.10892
cccacctttactttggtgcatggcactgggtggctgtgttgtgacttctttgctgatttc  c.388-4141

.         .         .         .         .         .           g.10952
tgattaccgcatggaccacagcagccctgtgactgctgtttttttttttttttttttttt  c.388-4081

.         .         .         .         .         .           g.11012
ttatggtgccagtgacatctaccattggtgcagtgcgtgtgctgggaagaaattccgcaa  c.388-4021

.         .         .         .         .         .           g.11072
ggtggctcccagtagttaaaggagtacataaatagtcaaacatgcagagtcctctaccag  c.388-3961

.         .         .         .         .         .           g.11132
ctcaacccagtttttatgcacttttggtaaataaacagaaaggcttcttgttcaggcttg  c.388-3901

.         .         .         .         .         .           g.11192
ctctgtgtgaaccagaccgttgtgcttggctggcttcttggtattctatctattaacctc  c.388-3841

.         .         .         .         .         .           g.11252
gccacccttttgtaactggtgcatttaattatcagtgggatgcttttcaaacaggtaagg  c.388-3781

.         .         .         .         .         .           g.11312
gtaatgatgggaaagggggtggggatgtctcattgagagtcacaaatctggatatgagct  c.388-3721

.         .         .         .         .         .           g.11372
ttggggccccttggtgagcctttgagtgggctttgatgagaaaatcaccctttgtaacca  c.388-3661

.         .         .         .         .         .           g.11432
gatcggactctattgacatgtcaagccctacagacttgattgctttctgtgcctgaagtc  c.388-3601

.         .         .         .         .         .           g.11492
ttagcctagatgctataggatagttgtcctttcttatctcactttcccaaaacccactcg  c.388-3541

.         .         .         .         .         .           g.11552
cattgtgtgcatgagtacgtgtgcatgcgccacacatggactccctgcaaccttttctgc  c.388-3481

.         .         .         .         .         .           g.11612
ttaatatgttttgtgactggaatattttatactctggccacccagacacaggcaggacaa  c.388-3421

.         .         .         .         .         .           g.11672
tagagttggccgaattgactgaaatgaggattatggagaataatagggcctctccaaaaa  c.388-3361

.         .         .         .         .         .           g.11732
taatgctaacacaggacaagcgacaggaagcaacagttgagtcagcagagctcagggccc  c.388-3301

.         .         .         .         .         .           g.11792
ctgacgaaccctgggagccgactgactgtgcacaatggccgcgttggcacgtcgggcatt  c.388-3241

.         .         .         .         .         .           g.11852
cccaggatgtgcgtgccgccggcgggcctgcctgtcgcagcagcctggggttttggacgc  c.388-3181

.         .         .         .         .         .           g.11912
cgcacgcgtgccgtttggatggcggtttatttgtgtccgtcagcttggcaggaggggagg  c.388-3121

.         .         .         .         .         .           g.11972
cagccgcttctcagggcttggtttggctgtcactgttgccaggaaaaggaagctcccggc  c.388-3061

.         .         .         .         .         .           g.12032
tgccaacacaattacctttgtttcttacatccccccttcttaatgtggcaattaagtgct  c.388-3001

.         .         .         .         .         .           g.12092
taccgctctgcccagtgccaaggtaaccgccatggagtgggacagggcagagaacacaac  c.388-2941

.         .         .         .         .         .           g.12152
cttggcacagcagcctaagtgtggagggcgggaggaggtgcaggggccccagccttgctg  c.388-2881

.         .         .         .         .         .           g.12212
ggaacctggtggcccttggatgccttggggctttgatgccaggactctcctctaggtaga  c.388-2821

.         .         .         .         .         .           g.12272
attccacagaaatcttccaaaaagcaattccgaaggctgaccattcctctttgatgccac  c.388-2761

.         .         .         .         .         .           g.12332
accagaatgggaaccagctgccaggtttccagatttccttgggcttggagctgggaaggg  c.388-2701

.         .         .         .         .         .           g.12392
gctgaagtgactcactttgcaaatccagactaaagatctgtttgctacccctccttcctg  c.388-2641

.         .         .         .         .         .           g.12452
tgtggccttcacagtactgttctggaaaacataaggaaagatgaaagccaggtgactctt  c.388-2581

.         .         .         .         .         .           g.12512
cggcagagtcttagttctgtagtctgaaatcaagaaaaacccaggtatttgcttttgttg  c.388-2521

.         .         .         .         .         .           g.12572
ttgttgttttgctgtataaacttaagtttgaacacttgcctttccaagccctcctgggat  c.388-2461

.         .         .         .         .         .           g.12632
ggaggactccgcctctactgggggtcagagttgcagtggctgcttgtatgtgacttcggc  c.388-2401

.         .         .         .         .         .           g.12692
atagtggatttgctgctctgtggcctggtccctgctttgatgtggggtgcatgatctggg  c.388-2341

.         .         .         .         .         .           g.12752
atctcagtgcctgggtgtatgttcagggatgtacagaggtcaagtgtgggcctgggaaaa  c.388-2281

.         .         .         .         .         .           g.12812
attaaagttctctagcaactaataatcattgttaaattatcttgattgctgatctatagt  c.388-2221

.         .         .         .         .         .           g.12872
gtggggatggagtgggaggttgagtgcctcctaataggaaccttggagggaatccttttt  c.388-2161

.         .         .         .         .         .           g.12932
ctctgtagggctgggcaggaggaatcctcctgccccaggagaccctaatcccctccctga  c.388-2101

.         .         .         .         .         .           g.12992
aacagacaggaaaaaaagtccaggctttgttgccgtcactgtagctccctgccctcaccc  c.388-2041

.         .         .         .         .         .           g.13052
tgtctctgcctctgagaaagaagggcagttcatggaaaatcacagagccaggcacgtagg  c.388-1981

.         .         .         .         .         .           g.13112
gctgtgtgcaattcttttctctccaggtggggtgatgtcggtcagcaacttctgaggttt  c.388-1921

.         .         .         .         .         .           g.13172
tcccagttctggcgaggatgagcctggtagactgcttggtcgtccaagttcttgtgcaag  c.388-1861

.         .         .         .         .         .           g.13232
acctaaggatgctttcctctttgagtattaaactgagttagtactgccatgccagctcag  c.388-1801

.         .         .         .         .         .           g.13292
tcccggcaccttcccttgcagtggggtttgtgggtattatgtgtttagcgcttgtgcaag  c.388-1741

.         .         .         .         .         .           g.13352
tctgtcaaaactcctggtatcaatgcatttaatcagaggattaattacaacaatactgtt  c.388-1681

.         .         .         .         .         .           g.13412
gaagtggaggacgtgggcctcaacgtgaccagcaaatgaagggcttaattatacagaatc  c.388-1621

.         .         .         .         .         .           g.13472
agccacacatctggcctcattttgactgtgctcttacctcaaatcagtagagaaatataa  c.388-1561

.         .         .         .         .         .           g.13532
tttcttgctgctcttagggaagagtcctgtaatttgcaggaagtcctaagaaacttaaag  c.388-1501

.         .         .         .         .         .           g.13592
aggcagtaaataaggtataactttcgctaataaaatagtaacaacagcaatgaatttgga  c.388-1441

.         .         .         .         .         .           g.13652
cctgtggccactaacaggagagggctgggtatgtgccctggcttgcccggttttgcttgc  c.388-1381

.         .         .         .         .         .           g.13712
ttttctgagcattttcccacagttatcagtgaacgaaatggaatcctactctgctttgag  c.388-1321

.         .         .         .         .         .           g.13772
tatgaaacatatttcggctgaattccaaggcagggtctatcacaagatatttttatattc  c.388-1261

.         .         .         .         .         .           g.13832
agagatgacctgctgtgtcactctgagagcgctaagctggccttgagttatgaatgaaac  c.388-1201

.         .         .         .         .         .           g.13892
tcccttttaccctccctttttctctttttcctttatcttataggtgctttctcttctctt  c.388-1141

.         .         .         .         .         .           g.13952
ggcagcagtgtgcttctggtggcacagcacggtattatttaatctatacacgcttctatt  c.388-1081

.         .         .         .         .         .           g.14012
tcctatggcttggtttctgacacagcaaagcagggattcataacctagttcatgttcctt  c.388-1021

.         .         .         .         .         .           g.14072
gtctaccccacctgccttgagtacatttcttcagtgccaagatagcagaagcttcattta  c.388-961

.         .         .         .         .         .           g.14132
aacgctggtgttttgtgagactgaccttactgtaaattacgaaggaaaattttagaaaag  c.388-901

.         .         .         .         .         .           g.14192
gagggaatttgctaatagcttaggtttggctgggggtggggaggtggaattctgagataa  c.388-841

.         .         .         .         .         .           g.14252
gcttggaagataaaaggtgccttcagtttaacagctggcatcttgccagtatccagggaa  c.388-781

.         .         .         .         .         .           g.14312
tttgtttagttagtagactctgattattcttggaatgttagatcttattaacagataagt  c.388-721

.         .         .         .         .         .           g.14372
tcatcaataaatataacccatgggtgtgcggttgtttctccctttgtactttcttccctg  c.388-661

.         .         .         .         .         .           g.14432
ggatctgcccccaactccaccgcccaagtgaggttgacttctttgtcttgcagagtcact  c.388-601

.         .         .         .         .         .           g.14492
ttgcatctaccccctcctgtttcctagagttacccgatacttgtgggagccaggatggtc  c.388-541

.         .         .         .         .         .           g.14552
tcacatagacagagttttcaaaggggttctaaaaaggaaaagggggcctccctagagact  c.388-481

.         .         .         .         .         .           g.14612
gcctcaccagggcccaaagtgtaaccttagcaataccccctcggtacaaatacctggtta  c.388-421

.         .         .         .         .         .           g.14672
ggttagcttagaataaattctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg  c.388-361

.         .         .         .         .         .           g.14732
tttcctcatgcactagggtcagggtctggaaagttttgggaaactatatgctaaatactc  c.388-301

.         .         .         .         .         .           g.14792
tcatatcatatagtgaggtggcatttcctgatctcaactttgagctgcctgcatgcatgt  c.388-241

.         .         .         .         .         .           g.14852
tgactccagtgcgtccctgccaggtgaaaggagtcatttgtcaacctgggaagagtgctg  c.388-181

.         .         .         .         .         .           g.14912
acaaaggaaggggagttggtttggatttaaacatccaggaactcaatgcaacaaccaaca  c.388-121

.         .         .         .         .         .           g.14972
gaatttttattttggcattatggttttgtttggtggggtattctgggaggccaagaatgt  c.388-61

.         .         .         .         .         .           g.15032
acgagattttggaaagtcgaccctgtttctgaattgctaaattgtttgtttgtcttgcag  c.388-1


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