(used for variant description)
(last modified December 24, 2014)
This file was created to facilitate the description of sequence variants on transcript NM_005559.3 in the LAMA1 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000018.9, covering LAMA1 transcript NM_005559.3.
(upstream sequence)
. . . g.5034
cggggccagggcagcgcggactcgcgtcccgtgg c.-61
. . . . . . g.5094
agcgttccaggcgggcgcgcggctttctccccagacccaccgagtggcggcggaggcgag c.-1
. . . . . . g.5154
ATGCGCGGGGGCGTGCTCCTGGTCTTGCTGCTGTGTGTCGCCGCGCAGTGCCGGCAGAGA c.60
M R G G V L L V L L L C V A A Q C R Q R p.20
| 02 . . . . . . g.42416
G | GCCTGTTTCCTGCCATTCTCAATCTTGCCAGCAATGCTCACATCAGCACCAATGCCACC c.120
G | L F P A I L N L A S N A H I S T N A T p.40
. . . . . . g.42476
TGTGGCGAGAAGGGGCCGGAGATGTTCTGCAAACTTGTGGAGCATGTGCCAGGTCGGCCC c.180
C G E K G P E M F C K L V E H V P G R P p.60
. . . . . | 03 . g.42735
GTCCGAAACCCACAGTGCCGGATCTGTGATGGCAACAGCGCAAACCCCAGAG | AACGCCAT c.240
V R N P Q C R I C D G N S A N P R E | R H p.80
. . . . . . g.42795
CCAATATCACATGCCATAGATGGCACCAATAACTGGTGGCAAAGTCCCAGCATTCAGAAT c.300
P I S H A I D G T N N W W Q S P S I Q N p.100
. . . . | 04 . . g.71893
GGGAGAGAATATCACTGGGTCACAATCACTCTGGACTTAAGACAG | GTCTTTCAAGTTGCA c.360
G R E Y H W V T I T L D L R Q | V F Q V A p.120
. . . . . . g.71953
TATGTCATCATTAAAGCTGCCAATGCCCCTCGACCTGGAAACTGGATTTTGGAGCGTTCT c.420
Y V I I K A A N A P R P G N W I L E R S p.140
. . . . . . g.72013
CTGGATGGCACCACGTTCAGCCCCTGGCAGTATTATGCAGTCAGCGACTCAGAGTGTTTG c.480
L D G T T F S P W Q Y Y A V S D S E C L p.160
. . . . . . g.72073
TCTCGTTACAATATAACTCCAAGACGAGGGCCACCCACCTACAGGGCTGATGATGAAGTG c.540
S R Y N I T P R R G P P T Y R A D D E V p.180
. . . . | 05 . g.73569
ATCTGCACCTCCTATTATTCCAGATTGGTGCCACTTGAGCATGGAGAG | ATTCATACATCA c.600
I C T S Y Y S R L V P L E H G E | I H T S p.200
. . . . . . g.73629
CTCATCAATGGCAGACCAAGCGCTGACGATCTTTCACCCAAGTTGTTGGAATTCACTTCT c.660
L I N G R P S A D D L S P K L L E F T S p.220
. . . . . . g.73689
GCACGATATATTCGCCTTCGCTTGCAACGCATTAGAACGCTCAATGCAGATCTCATGACC c.720
A R Y I R L R L Q R I R T L N A D L M T p.240
. . . . | 06 . g.76459
CTTAGCCACCGGGAACCTAAAGAACTGGATCCTATTGTTACCAGACGC | TATTATTATTCA c.780
L S H R E P K E L D P I V T R R | Y Y Y S p.260
. . . . . . g.76519
ATAAAGGACATTTCTGTTGGAGGCATGTGTATCTGCTATGGCCATGCTAGTAGCTGCCCA c.840
I K D I S V G G M C I C Y G H A S S C P p.280
. | 07 . . . . g.78017
TGGGATGAAACTACAAAG | AAACTGCAGTGTCAATGTGAGCATAATACTTGCGGGGAGAGC c.900
W D E T T K | K L Q C Q C E H N T C G E S p.300
. . . . . . g.78077
TGTAACAGGTGCTGTCCTGGGTACCATCAGCAGCCCTGGAGGCCGGGAACCGTGTCCTCC c.960
C N R C C P G Y H Q Q P W R P G T V S S p.320
. | 08 . . . . . g.79453
GGCAATACATGTGAAG | CATGTAATTGTCACAATAAAGCCAAAGACTGTTACTATGATGAA c.1020
G N T C E A | C N C H N K A K D C Y Y D E p.340
. . . . . . g.79513
AGTGTTGCAAAGCAGAAGAAAAGTTTGAATACTGCTGGACAGTTCAGAGGAGGAGGGGTT c.1080
S V A K Q K K S L N T A G Q F R G G G V p.360
. . . . . . g.79573
TGCATAAATTGCTTGCAGAACACCATGGGAATCAACTGTGAAACCTGTATTGATGGATAT c.1140
C I N C L Q N T M G I N C E T C I D G Y p.380
. | 09 . . . . . g.80609
TATAGACCACACAAA | GTGTCTCCTTATGAGGATGAGCCTTGCCGCCCCTGTAATTGTGAC c.1200
Y R P H K | V S P Y E D E P C R P C N C D p.400
. . . . . . g.80669
CCTGTGGGGTCCCTCAGTTCTGTCTGTATTAAGGATGACCTCCATTCTGACTTACACAAT c.1260
P V G S L S S V C I K D D L H S D L H N p.420
| 10 . . . . . . g.82637
G | GGAAGCAGCCAGGTCAGTGCCCATGTAAGGAAGGTTATACAGGAGAAAAATGTGATCGC c.1320
G | K Q P G Q C P C K E G Y T G E K C D R p.440
. . . . . . g.82697
TGCCAACTTGGCTATAAGGATTACCCGACCTGTGTCTCCTGTGGGTGCAACCCAGTGGGC c.1380
C Q L G Y K D Y P T C V S C G C N P V G p.460
. . . . | 11 . . g.83882
AGTGCCAGTGATGAGCCCTGCACAGGGCCCTGTGTTTGTAAG | GAAAACGTTGAGGGGAAG c.1440
S A S D E P C T G P C V C K | E N V E G K p.480
. . . . . . g.83942
GCCTGTGATCGCTGCAAGCCAGGATTCTATAACTTGAAGGAAAAAAACCCCCGGGGCTGC c.1500
A C D R C K P G F Y N L K E K N P R G C p.500
. . . . . . g.84002
TCCGAGTGCTTCTGCTTTGGCGTTTCTGATGTCTGCAGCAGCCTCTCTTGGCCTGTTGGT c.1560
S E C F C F G V S D V C S S L S W P V G p.520
| 12 . . . . . . g.85120
CAG | GTAAACAGTATGTCCGGGTGGCTGGTCACCGACTTGATCAGTCCCAGGAAGATCCCG c.1620
Q | V N S M S G W L V T D L I S P R K I P p.540
. . . . . . g.85180
TCTCAGCAAGATGCACTAGGCGGGCGCCATCAGGTCAGCATCAACAACACCGCGGTCATG c.1680
S Q Q D A L G G R H Q V S I N N T A V M p.560
. . . . . | 13. g.86729
CAGAGACTGGCTCCCAAGTACTACTGGGCAGCCCCCGAGGCCTACCTTGGAAATAAG | CTG c.1740
Q R L A P K Y Y W A A P E A Y L G N K | L p.580
. . . . . . g.86789
ACTGCGTTTGGCGGATTCCTGAAATACACGGTGTCCTACGATATTCCGGTAGAGACGGTA c.1800
T A F G G F L K Y T V S Y D I P V E T V p.600
. . . | 14 . . g.88145
GACAGTAACCTCATGTCGCATGCTGACGTCATCATTAAG | GGAAACGGACTCACTTTAAGC c.1860
D S N L M S H A D V I I K | G N G L T L S p.620
. . . . . . g.88205
ACACAGGCTGAGGGTCTGTCATTGCAGCCTTATGAAGAGTACCTAAACGTGGTTAGACTT c.1920
T Q A E G L S L Q P Y E E Y L N V V R L p.640
. . . . . . g.88265
GTGCCTGAAAACTTCCAAGATTTTCACAGCAAAAGGCAGATTGATCGTGACCAGCTGATG c.1980
V P E N F Q D F H S K R Q I D R D Q L M p.660
. . . . . . g.88325
ACTGTCCTTGCCAATGTGACACATCTTTTGATCAGAGCCAACTACAATTCTGCAAAAATG c.2040
T V L A N V T H L L I R A N Y N S A K M p.680
. | 15 . . . . . g.89768
GCTCTTTACAG | GTTGGAGTCCGTCTCTCTGGACATAGCCAGCTCTAATGCCATCGACCTG c.2100
A L Y R | L E S V S L D I A S S N A I D L p.700
. . . . . . g.89828
GTGGTGGCCGCTGATGTGGAGCACTGTGAATGTCCGCAAGGCTACACAGGGACCTCCTGT c.2160
V V A A D V E H C E C P Q G Y T G T S C p.720
| 16 . . . . . . g.90695
GAG | TCGTGCCTCTCTGGCTATTACCGCGTGGATGGAATACTCTTTGGAGGAATTTGTCAA c.2220
E | S C L S G Y Y R V D G I L F G G I C Q p.740
. . . . . | 17 . g.96714
CCCTGTGAATGCCACGGCCATGCAGCTGAGTGTAATGTTCACGGCGTTTGCATT | GCGTGT c.2280
P C E C H G H A A E C N V H G V C I | A C p.760
. . . . . . g.96774
GCGCACAACACCACCGGCGTCCACTGTGAGCAGTGCTTGCCCGGCTTCTACGGGGAGCCT c.2340
A H N T T G V H C E Q C L P G F Y G E P p.780
. . . . . . g.96834
TCCCGAGGGACACCTGGGGACTGCCAGCCCTGCGCCTGCCCTCTCACCATAGCCTCCAAC c.2400
S R G T P G D C Q P C A C P L T I A S N p.800
| 18 . . . . . . g.98406
AA | TTTCAGCCCCACCTGCCACCTCAATGATGGAGATGAAGTGGTCTGTGACTGGTGTGCC c.2460
N | F S P T C H L N D G D E V V C D W C A p.820
. . | 19 . . . g.99470
CCGGGCTACTCAGGAGCTTGGTGTGAGAG | ATGTGCAGATGGTTACTATGGAAACCCAACA c.2520
P G Y S G A W C E R | C A D G Y Y G N P T p.840
. . . . . . g.99530
GTGCCTGGCGAATCTTGTGTTCCCTGTGACTGCAGCGGCAACGTGGACCCCTCGGAGGCT c.2580
V P G E S C V P C D C S G N V D P S E A p.860
. . . . . . g.99590
GGTCACTGTGACTCAGTCACCGGGGAGTGCCTGAAGTGCCTGGGGAACACAGATGGCGCC c.2640
G H C D S V T G E C L K C L G N T D G A p.880
. . . . . . g.99650
CACTGTGAAAGGTGTGCTGACGGGTTCTATGGGGACGCTGTGACAGCCAAGAACTGCCGC c.2700
H C E R C A D G F Y G D A V T A K N C R p.900
| 20 . . . . . . g.105489
G | CCTGTGAATGCCATGTGAAAGGCTCCCATTCTGCCGTGTGCCATCTTGAGACCGGGCTC c.2760
A | C E C H V K G S H S A V C H L E T G L p.920
. . . . | 21 . g.106155
TGTGACTGCAAACCAAACGTGACTGGACAGCAGTGTGACCAGTGCTTG | CATGGCTATTAT c.2820
C D C K P N V T G Q Q C D Q C L | H G Y Y p.940
. . . . . . g.106215
GGGCTGGACTCAGGCCATGGCTGCCGGCCCTGCAACTGCAGCGTGGCAGGCTCCGTGTCA c.2880
G L D S G H G C R P C N C S V A G S V S p.960
. . . . . . g.106275
GATGGCTGCACGGATGAAGGCCAGTGTCACTGTGTCCCAGGTGTGGCAGGGAAAAGGTGT c.2940
D G C T D E G Q C H C V P G V A G K R C p.980
. . . . | 22 . g.106967
GACAGGTGTGCCCATGGCTTCTACGCCTACCAGGATGGTAGCTGTACAC | CCTGTGACTGC c.3000
D R C A H G F Y A Y Q D G S C T P | C D C p.1000
. . . . . . g.107027
CCACACACTCAGAATACCTGCGACCCAGAAACTGGAGAGTGTGTCTGCCCCCCTCACACA c.3060
P H T Q N T C D P E T G E C V C P P H T p.1020
. . . . . . g.107087
CAGGGTGTGAAGTGTGAAGAATGTGAGGATGGGCACTGGGGCTACGATGCGGAGGTGGGG c.3120
Q G V K C E E C E D G H W G Y D A E V G p.1040
| 23 . . . . . . g.108817
TGCCAG | GCCTGCAATTGCAGTCTCGTGGGGTCGACTCATCATCGGTGCGATGTGGTCACC c.3180
C Q | A C N C S L V G S T H H R C D V V T p.1060
. . . . . . g.108877
GGCCATTGCCAGTGCAAGTCAAAATTTGGTGGCCGGGCCTGCGATCAGTGTTCCTTGGGT c.3240
G H C Q C K S K F G G R A C D Q C S L G p.1080
. . . . . . g.108937
TACAGAGACTTTCCCGACTGTGTTCCCTGTGACTGTGACCTGAGGGGGACGTCGGGGGAC c.3300
Y R D F P D C V P C D C D L R G T S G D p.1100
. . . . . . g.108997
GCCTGCAACCTGGAGCAGGGTCTCTGCGGCTGTGTGGAGGAAACCGGGGCCTGCCCTTGC c.3360
A C N L E Q G L C G C V E E T G A C P C p.1120
| 24 . . . . . . g.110733
AAG | GAAAATGTCTTTGGTCCTCAGTGCAACGAATGTCGAGAGGGCACCTTCGCTCTCCGC c.3420
K | E N V F G P Q C N E C R E G T F A L R p.1140
. . . . . . g.110793
GCAGACAACCCCCTGGGCTGCAGCCCGTGCTTCTGCTCCGGGCTGTCCCACCTCTGCTCA c.3480
A D N P L G C S P C F C S G L S H L C S p.1160
. . | 25. . . . g.111368
GAGCTGGAGGACTACGTGAGGACCCCA | GTAACGCTGGGCTCCGATCAGCCTCTTCTGCGT c.3540
E L E D Y V R T P | V T L G S D Q P L L R p.1180
. . . . . . g.111428
GTGGTTTCTCAGAGTAACTTGAGGGGCACGACCGAGGGGGTTTACTACCAGGCCCCCGAC c.3600
V V S Q S N L R G T T E G V Y Y Q A P D p.1200
. . . . . . g.111488
TTCCTGCTGGATGCCGCCACCGTCCGGCAGCACATCCGTGCAGAGCCGTTTTACTGGCGG c.3660
F L L D A A T V R Q H I R A E P F Y W R p.1220
. . | 26. . . . g.112462
CTGCCGCAGCAGTTCCAAGGAGACCAG | CTCATGGCCTATGGTGGCAAACTGAAGTACAGC c.3720
L P Q Q F Q G D Q | L M A Y G G K L K Y S p.1240
. . . . . . g.112522
GTGGCCTTCTATTCTTTGGATGGCGTCGGCACCTCCAATTTTGAGCCTCAAGTTCTCATC c.3780
V A F Y S L D G V G T S N F E P Q V L I p.1260
. . . . . . g.112582
AAAGGTGGTCGGATCAGAAAGCAAGTCATTTACATGGATGCACCAGCCCCAGAGAATGGA c.3840
K G G R I R K Q V I Y M D A P A P E N G p.1280
. . . | 27 . . . g.113475
GTGAGACAGGAACAAGAAGTAGCAATGAGAGAG | AATTTTTGGAAATATTTTAACTCTGTT c.3900
V R Q E Q E V A M R E | N F W K Y F N S V p.1300
. . . . . . g.113535
TCTGAAAAACCTGTCACGCGAGAGGATTTTATGTCTGTCCTCAGCGATATTGAGTACATC c.3960
S E K P V T R E D F M S V L S D I E Y I p.1320
. . . . | 28 . . g.114225
CTCATCAAGGCATCGTATGGTCAAGGATTACAGCAGAGCAG | AATCTCAGACATTTCAATG c.4020
L I K A S Y G Q G L Q Q S R | I S D I S M p.1340
. . . . . . g.114285
GAGGTTGGCAGAAAGGCTGAAAAGCTGCACCCAGAAGAAGAGGTTGCATCTCTTTTAGAG c.4080
E V G R K A E K L H P E E E V A S L L E p.1360
. . . . | 29 . . g.115556
AATTGTGTCTGTCCTCCTGGCACTGTGGGATTCTCATGTCAG | GACTGCGCCCCTGGGTAC c.4140
N C V C P P G T V G F S C Q | D C A P G Y p.1380
. . . . . . g.115616
CACAGAGGGAAGCTCCCAGCAGGGAGTGACAGGGGACCACGCCCTCTGGTTGCTCCTTGT c.4200
H R G K L P A G S D R G P R P L V A P C p.1400
. . . . . . g.115676
GTTCCCTGCAGTTGCAACAACCACAGTGACACCTGTGACCCCAACACCGGGAAGTGTCTG c.4260
V P C S C N N H S D T C D P N T G K C L p.1420
| 30 . . . . . . g.120489
| AACTGTGGCGATAACACAGCAGGTGACCATTGTGATGTGTGTACTTCTGGCTACTACGGG c.4320
| N C G D N T A G D H C D V C T S G Y Y G p.1440
. . . . . . g.120549
AAGGTGACTGGCTCAGCAAGTGACTGTGCTCTGTGTGCCTGTCCTCACAGCCCTCCTGCC c.4380
K V T G S A S D C A L C A C P H S P P A p.1460
| 31 . . . . . . g.122875
AG | TTTTAGTCCCACTTGTGTCTTGGAAGGGGACCACGATTTCCGTTGTGACGCCTGTCTC c.4440
S | F S P T C V L E G D H D F R C D A C L p.1480
. . | 32 . . . g.123207
CTGGGCTATGAAGGAAAACACTGTGAAAG | GTGCTCCTCAAGCTATTATGGGAACCCTCAA c.4500
L G Y E G K H C E R | C S S S Y Y G N P Q p.1500
. . . . . . g.123267
ACACCAGGTGGCAGTTGCCAGAAGTGTGACTGCAACCCGCACGGCTCTGTCCACGGTGAC c.4560
T P G G S C Q K C D C N P H G S V H G D p.1520
. . . . . . g.123327
TGTGACCGCACATCTGGGCAGTGCGTTTGCAGGCTGGGGGCCTCGGGGCTCCGGTGCGAT c.4620
C D R T S G Q C V C R L G A S G L R C D p.1540
. . . . | 33 . . g.124947
GAGTGTGAACCGAGGCACATTCTGATGGAAACAGATTGTGTTT | CCTGTGATGATGAGTGT c.4680
E C E P R H I L M E T D C V S | C D D E C p.1560
. . . . . . g.125007
GTAGGTGTGCTGCTGAATGACTTGGATGAGATTGGTGATGCCGTTCTTTCTCTGAACCTC c.4740
V G V L L N D L D E I G D A V L S L N L p.1580
. . . . . . g.125067
ACTGGCATTATCCCTGTCCCATATGGAATTTTGTCAAACCTGGAAAATACAACTAAATAT c.4800
T G I I P V P Y G I L S N L E N T T K Y p.1600
| 34 . . . . . . g.127422
CTCCAG | GAATCTTTATTAAAAGAAAATATGCAAAAGGACCTGGGAAAAATTAAGCTTGAA c.4860
L Q | E S L L K E N M Q K D L G K I K L E p.1620
. . . | 35 . . . g.129086
GGTGTTGCAGAAGAAACGGACAACCTGCAAAAGAAG | CTCACTAGGATGTTAGCGAGTACC c.4920
G V A E E T D N L Q K K | L T R M L A S T p.1640
. . . . . . g.129146
CAAAAGGTGAATAGGGCAACTGAGAGAATCTTCAAGGAGAGTCAAGACCTGGCCATAGCC c.4980
Q K V N R A T E R I F K E S Q D L A I A p.1660
. . | 36 . . . g.130126
ATTGAGAGGCTGCAGATGAGCATCACAG | AAATTATGGAAAAGACAACTTTAAATCAGACT c.5040
I E R L Q M S I T E | I M E K T T L N Q T p.1680
. . . . . . g.130186
TTGGATGAAGATTTCCTACTACCCAATTCTACTCTTCAGAACATGCAACAGAATGGTACA c.5100
L D E D F L L P N S T L Q N M Q Q N G T p.1700
. . . . . . g.130246
TCTTTGCTAGAAATCATGCAGATAAGAGACTTCACACAGTTGCACCAAAATGCCACCCTT c.5160
S L L E I M Q I R D F T Q L H Q N A T L p.1720
| 37 . . . . . g.136519
GAACTCAA | GGCTGCTGAAGATTTATTGTCACAAATTCAGGAAAATTACCAGAAGCCGCTG c.5220
E L K | A A E D L L S Q I Q E N Y Q K P L p.1740
. . . . . . g.136579
GAAGAATTGGAGGTATTGAAAGAAGCAGCAAGCCACGTCCTTTCAAAGCACAACAATGAA c.5280
E E L E V L K E A A S H V L S K H N N E p.1760
. . . . . . g.136639
CTAAAGGCGGCTGAGGCGCTCGTGAGGGAAGCTGAGGCAAAGATGCAGGAAAGCAACCAC c.5340
L K A A E A L V R E A E A K M Q E S N H p.1780
. . . | 38 . . g.137192
CTGCTGCTCATGGTCAATGCTAATCTGAGAGAATTCAGT | GATAAAAAGCTGCATGTTCAA c.5400
L L L M V N A N L R E F S | D K K L H V Q p.1800
. . . . . . g.137252
GAAGAACAAAATCTGACCTCAGAGCTCATTGTCCAAGGAAGAGGATTGATAGATGCTGCT c.5460
E E Q N L T S E L I V Q G R G L I D A A p.1820
. . . | 39 . . . g.137438
GCTGCACAAACAGATGCTGTACAAGATGCTCTAGAG | CACTTAGAGGATCACCAGGATAAG c.5520
A A Q T D A V Q D A L E | H L E D H Q D K p.1840
. . . . . . g.137498
CTACTTTTATGGTCTGCCAAAATCAGGCACCACATAGATGACCTGGTCATGCACATGTCC c.5580
L L L W S A K I R H H I D D L V M H M S p.1860
. . . . . . g.137558
CAAAGGAACGCAGTCGACCTGGTCTACAGAGCTGAGGACCATGCCGCTGAGTTCCAGAGA c.5640
Q R N A V D L V Y R A E D H A A E F Q R p.1880
. . | 40 . . . . g.139620
CTAGCAGATGTTCTGTACAG | TGGCCTTGAAAACATCAGAAATGTGTCCCTGAATGCCACC c.5700
L A D V L Y S | G L E N I R N V S L N A T p.1900
. . . . . . g.139680
AGTGCAGCCTATGTCCATTACAACATCCAGAGCCTGATTGAAGAATCGGAGGAACTGGCC c.5760
S A A Y V H Y N I Q S L I E E S E E L A p.1920
. . . | 41 . . . g.140248
AGAGATGCTCACAGGACTGTGACTGAGACGAGCCTG | CTCTCAGAATCCCTTGTTTCTAAC c.5820
R D A H R T V T E T S L | L S E S L V S N p.1940
. . . . . . g.140308
GGGAAAGCGGCCGTGCAGCGCAGCTCCAGATTTCTAAAAGAAGGCAACAACCTCAGCAGG c.5880
G K A A V Q R S S R F L K E G N N L S R p.1960
. | 42 . . . . . g.142227
AAGCTTCCAG | GTATTGCATTGGAACTGAGTGAATTGAGAAATAAGACAAACAGATTTCAA c.5940
K L P G | I A L E L S E L R N K T N R F Q p.1980
. . . . . . g.142287
GAGAATGCTGTTGAAATTACCAGGCAAACCAATGAATCACTCTTGATACTTAGAGCAATT c.6000
E N A V E I T R Q T N E S L L I L R A I p.2000
| 43. . . . . . g.144489
CCTAAAG | GTATAAGAGACAAGGGAGCCAAAACCAAAGAGCTGGCCACGTCTGCAAGCCAG c.6060
P K G | I R D K G A K T K E L A T S A S Q p.2020
. . . . . . g.144549
AGCGCGGTGAGCACGCTGAGGGACGTGGCGGGGCTGAGCCAGGAGCTGCTGAACACATCT c.6120
S A V S T L R D V A G L S Q E L L N T S p.2040
. . . . . . g.144609
GCCAGCCTGTCCAGGGTCAACACCACATTACGAGAGACACACCAGCTTCTGCAGGACTCC c.6180
A S L S R V N T T L R E T H Q L L Q D S p.2060
. | 44 . . . . . g.144983
ACCATGGCCA | CTCTGTTGGCTGGAAGAAAAGTCAAAGACGTGGAAATTCAAGCCAACCTT c.6240
T M A T | L L A G R K V K D V E I Q A N L p.2080
. . . . . . g.145043
TTGTTTGATCGGTTGAAGCCTTTGAAGATGTTAGAGGAGAATCTGAGCAGAAACCTATCA c.6300
L F D R L K P L K M L E E N L S R N L S p.2100
. . . . | 45 . . g.146749
GAAATTAAACTGTTGATCAGCCAGGCCCGCAAACAAGCAGCTTCT | ATTAAAGTCGCCGTG c.6360
E I K L L I S Q A R K Q A A S | I K V A V p.2120
. . . . . . g.146809
TCTGCAGACAGAGATTGCATCCGGGCCTACCAGCCTCAGATTTCCTCTACCAACTACAAT c.6420
S A D R D C I R A Y Q P Q I S S T N Y N p.2140
. . . . . . g.146869
ACCTTAACACTAAATGTTAAGACACAGGAACCCGATAATCTTCTCTTCTACCTCGGTAGC c.6480
T L T L N V K T Q E P D N L L F Y L G S p.2160
| 46 . . . . . g.147829
AGCACCGCT | TCTGATTTCCTTGCAGTGGAGATGCGGCGAGGGAGAGTGGCCTTCCTGTGG c.6540
S T A | S D F L A V E M R R G R V A F L W p.2180
. . . . . . g.147889
GACCTGGGCTCCGGGTCCACACGCTTGGAGTTTCCAGACTTTCCCATTGATGACAACAGA c.6600
D L G S G S T R L E F P D F P I D D N R p.2200
. . | 47 . . . . g.149644
TGGCACAGTATCCATGTAGCCAG | ATTTGGAAACATTGGTTCACTGAGTGTAAAGGAAATG c.6660
W H S I H V A R | F G N I G S L S V K E M p.2220
. . . . . . g.149704
AGCTCAAATCAAAAGTCACCAACAAAAACAAGTAAATCCCCTGGGACAGCTAATGTTCTG c.6720
S S N Q K S P T K T S K S P G T A N V L p.2240
. . . . . | 48 . g.150839
GATGTAAACAATTCAACACTCATGTTTGTTGGAGGTCTTGGAGGACAAATCAAG | AAATCT c.6780
D V N N S T L M F V G G L G G Q I K | K S p.2260
. . . . . . g.150899
CCTGCTGTGAAGGTTACTCATTTTAAAGGCTGCTTGGGGGAGGCCTTCCTGAATGGAAAA c.6840
P A V K V T H F K G C L G E A F L N G K p.2280
. . . . . | 49 g.156518
TCCATAGGCCTATGGAACTATATTGAAAGGGAAGGCAAGTGCCGTGGGTGCTTCGGAAG | C c.6900
S I G L W N Y I E R E G K C R G C F G S | p.2300
. . . . . . g.156578
TCCCAGAATGAAGACCCTTCCTTCCATTTTGACGGGAGTGGGTACTCTGTCGTGGAGAAG c.6960
S Q N E D P S F H F D G S G Y S V V E K p.2320
. . . . . . g.156638
TCACTTCCGGCTACCGTGACCCAGATAATCATGCTTTTTAATACCTTTTCACCTAATGGA c.7020
S L P A T V T Q I I M L F N T F S P N G p.2340
. . . | 50 . . . g.157412
CTTCTTCTCTACCTGGGTTCATACGGCACA | AAAGACTTTTTATCCATCGAGCTGTTTCGT c.7080
L L L Y L G S Y G T | K D F L S I E L F R p.2360
. . . . . . g.157472
GGCAGAGTGAAGGTTATGACTGACCTGGGTTCAGGACCCATTACCCTTTTGACAGACAGA c.7140
G R V K V M T D L G S G P I T L L T D R p.2380
. . . . . | 51 . g.158016
CGTTATAACAATGGAACCTGGTACAAAATTGCCTTCCAGCGAAACCGGAAGCAAG | GAGTG c.7200
R Y N N G T W Y K I A F Q R N R K Q G | V p.2400
. . . . . . g.158076
CTAGCAGTTATCGATGCCTATAACACCAGTAATAAAGAAACCAAGCAGGGCGAGACTCCG c.7260
L A V I D A Y N T S N K E T K Q G E T P p.2420
. . . . . . g.158136
GGAGCATCTTCTGACCTCAACCGCCTAGACAAGGACCCGATTTATGTGGGTGGATTACCA c.7320
G A S S D L N R L D K D P I Y V G G L P p.2440
. | 52. . . . . g.160798
AGGTCAAGAGTTGTAAG | GAGAGGTGTCACCACCAAAAGCTTTGTGGGCTGCATCAAGAAC c.7380
R S R V V R | R G V T T K S F V G C I K N p.2460
. . . . . . g.160858
CTGGAAATATCCAGATCAACCTTTGACTTACTCAGAAATTCCTATGGAGTGAGAAAAGGC c.7440
L E I S R S T F D L L R N S Y G V R K G p.2480
. | 53 . . . . . g.161103
TGTTTACTGGAG | CCCATCCGGAGTGTTAGCTTCCTGAAAGGCGGCTACATTGAATTGCCA c.7500
C L L E | P I R S V S F L K G G Y I E L P p.2500
. . . . . . g.161163
CCCAAATCTTTGTCACCAGAATCAGAATGGCTGGTAACATTTGCCACCACGAACAGCAGT c.7560
P K S L S P E S E W L V T F A T T N S S p.2520
. . . . . . g.161223
GGCATCATCCTGGCTGCCCTCGGCGGGGATGTGGAGAAGCGGGGTGATCGTGAGGAAGCA c.7620
G I I L A A L G G D V E K R G D R E E A p.2540
| 54 . . . . . . g.163376
CACGTG | CCCTTCTTTTCCGTCATGCTGATCGGAGGCAACATTGAGGTACATGTCAATCCT c.7680
H V | P F F S V M L I G G N I E V H V N P p.2560
. . . . . . g.163436
GGGGATGGGACAGGCCTGAGAAAAGCTCTCCTGCACGCTCCCACGGGTACCTGCAGTGAT c.7740
G D G T G L R K A L L H A P T G T C S D p.2580
. . . | 55 . . g.164174
GGACAAGCGCATTCCATCTCCTTGGTCAGGAATCGGAG | AATTATCACTGTCCAATTGGAT c.7800
G Q A H S I S L V R N R R | I I T V Q L D p.2600
. . . . . . g.164234
GAGAACAATCCTGTGGAAATGAAGTTGGGCACATTAGTAGAAAGCAGGACGATAAATGTG c.7860
E N N P V E M K L G T L V E S R T I N V p.2620
. . . . . . g.164294
TCCAATCTGTACGTCGGGGGAATTCCAGAGGGAGAGGGGACGTCACTGCTCACAATGAGA c.7920
S N L Y V G G I P E G E G T S L L T M R p.2640
. . . . | 56 . . g.166065
AGATCGTTCCATGGCTGTATCAAAAACCTGATCTTCAATTTGGA | ACTTTTGGATTTCAAC c.7980
R S F H G C I K N L I F N L E | L L D F N p.2660
. . . . . . g.166125
AGTGCAGTTGGCCATGAGCAAGTCGACCTGGACACCTGCTGGCTGTCAGAAAGGCCTAAG c.8040
S A V G H E Q V D L D T C W L S E R P K p.2680
. . . . . | 57 . g.167355
CTGGCTCCCGATGCAGAGGACAGCAAGCTCTTGCCAGAGCCCCGGGCTTTTCCA | GAACAG c.8100
L A P D A E D S K L L P E P R A F P | E Q p.2700
. . . . . . g.167415
TGTGTGGTGGATGCAGCTCTGGAGTACGTTCCCGGCGCTCACCAGTTTGGTCTCACACAA c.8160
C V V D A A L E Y V P G A H Q F G L T Q p.2720
. . . . | 58. . g.171856
AACAGCCATTTCATCTTGCCTTTTAATCAGTCGGCTGTCAGAAAGAA | GCTCTCGGTTGAG c.8220
N S H F I L P F N Q S A V R K K | L S V E p.2740
. . . . . . g.171916
CTAAGCATCCGCACGTTCGCCTCCAGCGGCCTGATTTACTACATGGCTCATCAGAACCAA c.8280
L S I R T F A S S G L I Y Y M A H Q N Q p.2760
. . . . . . g.171976
GCAGACTACGCTGTGCTCCAGCTGCACGGGGGCCGCCTCCACTTCATGTTTGACCTTGGC c.8340
A D Y A V L Q L H G G R L H F M F D L G p.2780
. . . . . | 59. g.173558
AAAGGCAGAACAAAGGTCTCTCACCCTGCACTGCTCAGTGATGGCAAGTGGCACACG | GTC c.8400
K G R T K V S H P A L L S D G K W H T | V p.2800
. . . . . . g.173618
AAGACAGACTATGTTAAAAGAAAAGGCTTCATAACTGTCGACGGCCGAGAGTCTCCCATG c.8460
K T D Y V K R K G F I T V D G R E S P M p.2820
. . . . . . g.173678
GTGACTGTGGTGGGAGATGGAACCATGCTGGATGTGGAGGGTTTGTTCTACCTAGGAGGC c.8520
V T V V G D G T M L D V E G L F Y L G G p.2840
. . . | 60 . . . g.174282
CTGCCCTCCCAGTACCAGGCCAGGAAAATTGGAAAT | ATCACCCACAGCATCCCTGCCTGC c.8580
L P S Q Y Q A R K I G N | I T H S I P A C p.2860
. . . . . . g.174342
ATTGGGGATGTGACGGTTAACAGCAAACAGCTGGACAAGGACAGCCCGGTGTCTGCCTTC c.8640
I G D V T V N S K Q L D K D S P V S A F p.2880
. . . . . . g.174402
ACGGTGAACAGGTGCTACGCAGTGGCCCAGGAAGGAACATACTTTGACGGAAGCGGATAT c.8700
T V N R C Y A V A Q E G T Y F D G S G Y p.2900
. | 61 . . . . . g.175568
GCAGCTCTTG | TCAAAGAGGGCTACAAAGTCCAGTCAGATGTGAACATCACACTGGAGTTT c.8760
A A L V | K E G Y K V Q S D V N I T L E F p.2920
. . . . . . g.175628
CGAACCTCCTCGCAGAATGGCGTCCTCCTGGGGATCAGCACTGCCAAAGTGGATGCCATT c.8820
R T S S Q N G V L L G I S T A K V D A I p.2940
. . | 62 . . . . g.179448
GGACTAGAGCTTGTGGACGGCAAG | GTCTTGTTCCATGTCAACAATGGTGCTGGCAGGATA c.8880
G L E L V D G K | V L F H V N N G A G R I p.2960
. . . . . . g.179508
ACAGCTGCATATGAGCCCAAAACCGCCACTGTGCTCTGTGATGGAAAATGGCACACTCTT c.8940
T A A Y E P K T A T V L C D G K W H T L p.2980
. . . . . . g.179568
CAAGCTAACAAAAGCAAACACCGTATCACTCTGATTGTTGACGGGAACGCAGTTGGCGCT c.9000
Q A N K S K H R I T L I V D G N A V G A p.3000
. . . . . . g.179628
GAAAGTCCACACACCCAGTCTACCTCAGTGGACACCAACAATCCCATTTATGTTGGTGGC c.9060
E S P H T Q S T S V D T N N P I Y V G G p.3020
| 63. . . . . . g.180628
TATCCTG | CTGGTGTGAAGCAAAAATGCCTGCGCAGCCAGACCTCGTTCCGCGGGTGTTTG c.9120
Y P A | G V K Q K C L R S Q T S F R G C L p.3040
. . . . . . g.180688
AGGAAGCTAGCTCTGATTAAGAGCCCGCAGGTGCAGTCCTTTGACTTCAGCAGAGCGTTC c.9180
R K L A L I K S P Q V Q S F D F S R A F p.3060
. . . . g.180736
GAACTGCACGGAGTTTTCCTTCATTCCTGTCCTGGGACCGAGTCCTGA c.9228
E L H G V F L H S C P G T E S X p.3075
. . . . . . g.180796
acttcaagcagaatcctcagttggaatcattgctaatattttgaggagaagtgtatgtgt c.*60
. . . . . . g.180856
gaattaagaatctcttcagttcatatttcatttccaactcaggttaagtgtttctgggga c.*120
. . . . . . g.180916
gagatgttgtgtttacgttacactaaaaccacatgtgcaacaaatacctccattaaatgg c.*180
. . . . . . g.180976
tctaaaatgtaaattgaattccctggctctctttttaaacgtatttttaaaaaaatcttt c.*240
. . . . . . g.181036
atacacattgaatgttctgttgattacttgatagtattttatgtttttcattttgagctt c.*300
. . . g.181071
tttaaaaaagtatcaatacagatgataacagatca c.*335
(downstream sequence)
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