(used for variant description)
(last modified December 14, 2018)
This file was created to facilitate the description of sequence variants on transcript NM_198129.1 in the LAMA3 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_007853.2, covering LAMA3 transcript NM_198129.1.
(upstream sequence)
. . g.5026
gcaggtccgggaggcgcaggcggaga c.-61
. . . . . . g.5086
gcggcggtgcccccgagcccctctgcggacggctcaggcgggaggaccccgcgcggctgg c.-1
. . . . . . g.5146
ATGGCGGCGGCCGCGCGGCCTCGGGGTCGGGCACTGGGGCCAGTACTGCCGCCGACGCCG c.60
M A A A A R P R G R A L G P V L P P T P p.20
. . . . . . g.5206
CTGCTCCTGCTGGTACTGCGGGTGCTGCCAGCCTGCGGGGCGACCGCTCGGGATCCCGGG c.120
L L L L V L R V L P A C G A T A R D P G p.40
. . . . . . g.5266
GCCGCGGCCGGGCTCAGCCTTCACCCGACTTACTTCAACCTGGCCGAGGCGGCGAGGATT c.180
A A A G L S L H P T Y F N L A E A A R I p.60
. . . . . . g.5326
TGGGCCACCGCCACCTGCGGGGAGAGGGGACCCGGCGAGGGGAGGCCCCAGCCCGAGCTC c.240
W A T A T C G E R G P G E G R P Q P E L p.80
. . . . . | 02 . g.29328
TACTGCAAGTTGGTCGGGGGCCCCACCGCCCCAGGCAGCGGCCACACCATCCAG | GGCCAG c.300
Y C K L V G G P T A P G S G H T I Q | G Q p.100
. . . . . . g.29388
TTCTGTGACTATTGCAATTCTGAAGACCCCAGGAAAGCACATCCTGTCACCAATGCCATC c.360
F C D Y C N S E D P R K A H P V T N A I p.120
. . . . . . g.29448
GATGGATCTGAACGTTGGTGGCAAAGCCCTCCCCTGTCCTCAGGCACACAGTACAACAGA c.420
D G S E R W W Q S P P L S S G T Q Y N R p.140
. . | 03. . . . g.63378
GTCAACCTCACCTTGGATCTGGGGCAG | CTCTTCCATGTGGCCTATATTTTAATCAAATTT c.480
V N L T L D L G Q | L F H V A Y I L I K F p.160
. . . . . . g.63438
GCAAATTCTCCTCGCCCTGATCTTTGGGTCTTGGAAAGATCTGTAGACTTTGGAAGCACC c.540
A N S P R P D L W V L E R S V D F G S T p.180
. . | 04 . . . . g.64865
TACTCACCATGGCAATATTTTGCTC | ATTCTAAAGTAGACTGTTTAAAAGAATTTGGGCGG c.600
Y S P W Q Y F A H | S K V D C L K E F G R p.200
. . . . . . g.64925
GAGGCAAATATGGCTGTCACCCGGGATGATGATGTACTTTGTGTTACTGAATATTCCCGT c.660
E A N M A V T R D D D V L C V T E Y S R p.220
. . | 05 . . . . g.66356
ATTGTACCTTTGGAAAATGGTGAG | GTTGTGGTGTCCTTGATAAACGGTCGTCCAGGTGCA c.720
I V P L E N G E | V V V S L I N G R P G A p.240
. . . . . . g.66416
AAAAATTTTACTTTCTCTCACACCCTGAGGGAGTTTACCAAGGCAACAAACATCCGCTTG c.780
K N F T F S H T L R E F T K A T N I R L p.260
. . . . . . g.66476
CGTTTTCTTAGAACCAATACGCTTCTTGGACACCTCATCTCCAAAGCCCAGCGAGATCCA c.840
R F L R T N T L L G H L I S K A Q R D P p.280
. | 06 . . . . . g.69168
ACTGTCACTCGGCGG | TATTATTACAGCATAAAGGACATCAGCATTGGTGGGCAGTGTGTT c.900
T V T R R | Y Y Y S I K D I S I G G Q C V p.300
. . . . | 07. . g.73811
TGCAATGGCCATGCTGAAGTGTGCAATATAAACAATCCTGAAAAACT | GTTTCGGTGTGAA c.960
C N G H A E V C N I N N P E K L | F R C E p.320
. . . . . . g.73871
TGCCAGCACCACACCTGTGGGGAGACGTGTGATCGCTGCTGCACAGGGTACAATCAGAGG c.1020
C Q H H T C G E T C D R C C T G Y N Q R p.340
. . . . | 08 . . g.78824
CGCTGGCGGCCCGCCGCTTGGGAGCAGAGCCACGAGTGTGAAG | CATGCAACTGCCACGGC c.1080
R W R P A A W E Q S H E C E A | C N C H G p.360
. . . . . . g.78884
CATGCCAGCAACTGTTACTATGATCCAGATGTTGAGCGGCAGCAGGCAAGCTTGAATACC c.1140
H A S N C Y Y D P D V E R Q Q A S L N T p.380
. . . . | 09 . . g.88917
CAGGGCATCTATGCTGGTGGAGGGGTCTGCATTAACTGTCAG | CACAACACAGCTGGAGTA c.1200
Q G I Y A G G G V C I N C Q | H N T A G V p.400
. . . . . . g.88977
AACTGTGAACAGTGTGCTAAGGGCTATTACCGCCCTTATGGGGTTCCAGTGGATGCCCCT c.1260
N C E Q C A K G Y Y R P Y G V P V D A P p.420
. | 10 . . . . . g.91241
GATGGCTGCATCC | CCTGCAGCTGTGACCCTGAGCATGCGGATGGCTGTGAACAGGGTTCA c.1320
D G C I P | C S C D P E H A D G C E Q G S p.440
. . . . . . g.91301
GGCCGCTGTCACTGCAAGCCAAATTTCCACGGAGACAACTGTGAGAAGTGTGCAATTGGA c.1380
G R C H C K P N F H G D N C E K C A I G p.460
. . | 11 . . . . g.92994
TACTACAATTTCCCATTTTGCTTGA | GAATTCCCATTTTTCCTGTTTCTACACCAAGTTCA c.1440
Y Y N F P F C L R | I P I F P V S T P S S p.480
. . | 12 . . . g.99457
GAAGATCCAGTAGCTGGAGATATAAAAG | GGTGTGACTGTAATCTGGAAGGTGTTCTCCCT c.1500
E D P V A G D I K G | C D C N L E G V L P p.500
. . . . . . g.99517
GAAATATGTGATGCCCACGGACGGTGCCTGTGCCGCCCTGGGGTTGAGGGCCCTCGATGT c.1560
E I C D A H G R C L C R P G V E G P R C p.520
. . . . | 13 . . g.125785
GATACCTGCCGCTCTGGTTTCTACTCATTCCCTATTTGCCAAG | CCTGCTGGTGTTCAGCC c.1620
D T C R S G F Y S F P I C Q A | C W C S A p.540
. . . . . . g.125845
CTTGGATCCTACCAGATGCCCTGCAGCTCAGTGACTGGACAGTGTGAATGTCGGCCAGGA c.1680
L G S Y Q M P C S S V T G Q C E C R P G p.560
. . . . . . g.125905
GTTACAGGACAGCGGTGTGACAGGTGTCTCTCAGGAGCTTATGATTTCCCCCACTGCCAA c.1740
V T G Q R C D R C L S G A Y D F P H C Q p.580
| 14 . . . . | 15 . g.129817
G | GTTCCAGCAGTGCTTGTGACCCAGCTGGTACCATCAACTCCAATTTG | GGGTATTGCCAA c.1800
G | S S S A C D P A G T I N S N L | G Y C Q p.600
. . . . . . g.129877
TGCAAGCTTCATGTTGAAGGTCCTACTTGTAGCCGCTGCAAACTGTTATATTGGAATCTG c.1860
C K L H V E G P T C S R C K L L Y W N L p.620
. . | 16 . . . g.130622
GACAAAGAAAACCCCAGTGGATGTTCAG | AATGCAAGTGCCATAAGGCGGGAACAGTGAGT c.1920
D K E N P S G C S E | C K C H K A G T V S p.640
. . | 17 . . . . g.130909
GGAACTGGAGAGTGTAGGCAG | GGAGATGGTGACTGTCACTGCAAGTCCCATGTGGGTGGC c.1980
G T G E C R Q | G D G D C H C K S H V G G p.660
. . . . . . g.130969
GATTCCTGCGACACCTGTGAAGATGGATATTTTGCTTTGGAAAAGAGCAATTACTTTGGG c.2040
D S C D T C E D G Y F A L E K S N Y F G p.680
| 18. . . . . . g.131843
TGTCAAG | GGTGTCAGTGTGACATTGGTGGGGCATTGTCCTCCATGTGCAGTGGGCCCTCG c.2100
C Q G | C Q C D I G G A L S S M C S G P S p.700
. . . . | 19. . g.135256
GGAGTGTGCCAGTGCCGAGAGCATGTCGTGGGAAAGGTGTGCCAGCG | GCCTGAAAACAAC c.2160
G V C Q C R E H V V G K V C Q R | P E N N p.720
. . . . . . g.135316
TACTATTTCCCAGATTTGCATCATATGAAGTATGAGATTGAAGACGGCAGCACACCTAAT c.2220
Y Y F P D L H H M K Y E I E D G S T P N p.740
. . . . . . g.135376
GGGAGAGACCTTCGATTTGGATTTGATCCGCTGGCATTTCCTGAGTTTAGCTGGAGAGGA c.2280
G R D L R F G F D P L A F P E F S W R G p.760
. . | 20 . . . . g.137690
TATGCCCAAATGACCTCAGTACAG | AATGATGTAAGAATAACATTGAATGTAGGGAAGTCA c.2340
Y A Q M T S V Q | N D V R I T L N V G K S p.780
. . . . . . g.137750
AGTGGCTCCTTGTTTCGTGTTATTCTGAGATACGTTAACCCTGGAACTGAAGCAGTATCT c.2400
S G S L F R V I L R Y V N P G T E A V S p.800
. . | 21 . . . g.139857
GGCCATATAACTATTTATCCATCCTGGG | GTGCTGCTCAAAGCAAAGAGATCATCTTCCTG c.2460
G H I T I Y P S W G | A A Q S K E I I F L p.820
. . . . . . g.139917
CCGAGTAAGGAGCCAGCCTTTGTCACTGTCCCTGGAAATGGTTTTGCAGACCCATTTTCA c.2520
P S K E P A F V T V P G N G F A D P F S p.840
. . . . . | 22 . g.142113
ATCACACCAGGAATATGGGTTGCTTGTATTAAGGCAGAAGGAGTCCTTCTG | GATTACCTG c.2580
I T P G I W V A C I K A E G V L L | D Y L p.860
. . . . . . g.142173
GTGCTGCTCCCCAGGGACTACTATGAAGCCTCTGTACTGCAGCTGCCAGTCACAGAACCA c.2640
V L L P R D Y Y E A S V L Q L P V T E P p.880
. . | 23 . . . g.142747
TGTGCCTACGCAGGACCTCCCCAAGAAAA | TTGCTTACTCTACCAGCATTTGCCAGTGACC c.2700
C A Y A G P P Q E N | C L L Y Q H L P V T p.900
. . . . . . g.142807
AGATTCCCCTGTACCCTGGCTTGTGAGGCCAGACACTTCCTGCTTGATGGGGAGCCAAGA c.2760
R F P C T L A C E A R H F L L D G E P R p.920
. . . . . . g.142867
CCCGTGGCAGTGAGGCAGCCCACACCTGCACACCCTGTCATGGTGGACCTCAGCGGGAGA c.2820
P V A V R Q P T P A H P V M V D L S G R p.940
| 24 . . . . . . g.149287
GAG | GTGGAATTGCATCTGCGGCTGCGCATCCCACAGGTTGGCCACTACGTGGTTGTGGTC c.2880
E | V E L H L R L R I P Q V G H Y V V V V p.960
. . . . . . g.149347
GAGTATTCCACGGAGGCAGCTCAGCTGTTTGTGGTTGATGTGAATGTGAAGAGCTCCGGG c.2940
E Y S T E A A Q L F V V D V N V K S S G p.980
. . . . | 25 . . g.152399
TCTGTTCTGGCAGGCCAGGTGAACATTTACAGCTGCAACTACAG | TGTTCTCTGCCGGAGT c.3000
S V L A G Q V N I Y S C N Y S | V L C R S p.1000
. . . . . . g.152459
GCTGTGATTGATCACATGAGCCGCATCGCCATGTATGAGCTATTGGCAGATGCAGACATT c.3060
A V I D H M S R I A M Y E L L A D A D I p.1020
. . . | 26 . . . g.154210
CAGCTCAAGGGACACATGGCCCGATTCCTTCTG | CATCAAGTTTGTATCATACCTATTGAA c.3120
Q L K G H M A R F L L | H Q V C I I P I E p.1040
. . . . . . g.154270
GAATTCTCAGCTGAGTATGTGAGACCACAAGTCCACTGCATTGCCAGTTATGGGCGATTT c.3180
E F S A E Y V R P Q V H C I A S Y G R F p.1060
. | 27 . . . . . g.155236
GTCAATCAAAG | TGCCACCTGTGTCTCCTTGGCCCATGAAACTCCTCCAACAGCATTAATT c.3240
V N Q S | A T C V S L A H E T P P T A L I p.1080
. . . . . . g.155296
TTGGATGTTCTAAGTGGCAGGCCTTTCCCTCACCTGCCCCAGCAGTCGTCACCTTCTGTT c.3300
L D V L S G R P F P H L P Q Q S S P S V p.1100
. . . | 28 . . . g.157821
GATGTTCTTCCTGGGGTCACCTTGAAGGCACCGCAG | AATCAAGTGACCCTGAGAGGACGT c.3360
D V L P G V T L K A P Q | N Q V T L R G R p.1120
. . . . . . g.157881
GTACCACACCTGGGCCGATACGTCTTTGTCATCCATTTTTACCAAGCAGCGCACCCGACG c.3420
V P H L G R Y V F V I H F Y Q A A H P T p.1140
. . . . | 29 . . g.158030
TTTCCCGCGCAGGTGTCGGTGGATGGCGGGTGGCCACGGGCAG | GCTCCTTCCATGCCTCT c.3480
F P A Q V S V D G G W P R A G | S F H A S p.1160
. . . . . . g.158090
TTTTGCCCCCATGTGCTTGGCTGCCGGGATCAAGTGATTGCCGAAGGCCAGATTGAGTTT c.3540
F C P H V L G C R D Q V I A E G Q I E F p.1180
. . . . . . g.158150
GACATCTCAGAGCCTGAAGTGGCCGCAACTGTGAAGGTTCCAGAAGGAAAGTCCTTGGTT c.3600
D I S E P E V A A T V K V P E G K S L V p.1200
| 30 . . . . . . g.160468
TTG | GTCCGTGTTCTAGTGGTGCCTGCAGAAAACTATGACTACCAAATACTTCACAAAAAA c.3660
L | V R V L V V P A E N Y D Y Q I L H K K p.1220
. . . . . | 31 g.161700
TCCATGGACAAGTCACTCGAGTTTATCACCAATTGTGGAAAAAACAGCTTTTACCTTGA | C c.3720
S M D K S L E F I T N C G K N S F Y L D | p.1240
. . . . . . g.161760
CCCCAGACAGCCTCCAGATTCTGTAAGAATTCCGCCAGGTCCCTGGTGGCCTTTTACCAC c.3780
P Q T A S R F C K N S A R S L V A F Y H p.1260
. . . . . . g.161820
AAGGGCGCCCTGCCTTGTGAGTGCCACCCCACTGGGGCCACCGGCCCTCACTGCAGCCCT c.3840
K G A L P C E C H P T G A T G P H C S P p.1280
. . . . . . g.161880
GAGGGTGGGCAGTGCCCATGCCAGCCCAACGTCATCGGGCGGCAGTGCACCCGCTGTGCA c.3900
E G G Q C P C Q P N V I G R Q C T R C A p.1300
. . . | 32 . . . g.162895
ACAGGCCACTACGGATTCCCACGCTGCAAGC | CGTGCAGCTGTGGTCGGCGCCTTTGTGAA c.3960
T G H Y G F P R C K P | C S C G R R L C E p.1320
. . . . . . g.162955
GAGATGACGGGGCAGTGCCGCTGCCCTCCCCGCACGGTCAGGCCCCAGTGTGAGGTGTGT c.4020
E M T G Q C R C P P R T V R P Q C E V C p.1340
. . . . . . g.163015
GAGACACACTCATTCAGCTTCCACCCCATGGCCGGCTGCGAAGGCTGCAACTGTTCCAGG c.4080
E T H S F S F H P M A G C E G C N C S R p.1360
. . . . . | 33 . g.173250
AGGGGCACCATCGAGGCTGCCATGCCGGAGTGTGACCGGGACAGCGGGCAGTGCAG | ATGC c.4140
R G T I E A A M P E C D R D S G Q C R | C p.1380
. . . . . . g.173310
AAGCCCAGAATCACAGGGCGGCAGTGTGACCGATGTGCTTCCGGGTTTTACCGCTTTCCT c.4200
K P R I T G R Q C D R C A S G F Y R F P p.1400
. . . . . . g.173370
GAGTGTGTTCCCTGCAATTGCAACAGAGATGGGACTGAGCCAGGAGTGTGTGACCCAGGG c.4260
E C V P C N C N R D G T E P G V C D P G p.1420
. . | 34 . . . . g.174130
ACCGGGGCTTGCCTCTGCAAG | GAAAATGTAGAAGGCACAGAGTGTAATGTGTGTCGAGAA c.4320
T G A C L C K | E N V E G T E C N V C R E p.1440
. . . . . . g.174190
GGCTCATTCCATTTGGACCCAGCCAATCTCAAGGGTTGTACCAGCTGTTTCTGTTTTGGA c.4380
G S F H L D P A N L K G C T S C F C F G p.1460
. . . . | 35 . . g.177066
GTAAATAATCAATGTCACAGCTCACATAAGCGAAGGACTAAG | TTTGTGGATATGCTGGGC c.4440
V N N Q C H S S H K R R T K | F V D M L G p.1480
. . . . . . g.177126
TGGCACCTGGAGACAGCAGACAGAGTGGACATCCCTGTCTCTTTCAACCCAGGCAGCAAC c.4500
W H L E T A D R V D I P V S F N P G S N p.1500
. . . . . . g.177186
AGTATGGTGGCGGATCTCCAGGAGCTGCCCGCAACCATCCACAGCGCGTCCTGGGTCGCA c.4560
S M V A D L Q E L P A T I H S A S W V A p.1520
. . | 36 . . . . g.180223
CCCACCTCCTACCTGGGGGACAAG | GTTTCTTCATATGGTGGTTACCTCACTTACCAAGCC c.4620
P T S Y L G D K | V S S Y G G Y L T Y Q A p.1540
. . . . . . g.180283
AAGTCCTTTGGCTTGCCTGGCGACATGGTTCTTCTGGAAAAGAAGCCGGATGTACAGCTC c.4680
K S F G L P G D M V L L E K K P D V Q L p.1560
| 37 . . . . . . g.183293
ACT | GGTCAGCACATGTCCATCATCTATGAGGAGACAAACACCCCACGGCCAGACCGGCTG c.4740
T | G Q H M S I I Y E E T N T P R P D R L p.1580
. . | 38. . . . g.186866
CATCATGGACGAGTGCACGTGGTCGAG | GGAAACTTCAGACATGCCAGCAGCCGTGCCCCA c.4800
H H G R V H V V E | G N F R H A S S R A P p.1600
. . . . . . g.186926
GTGTCTAGGGAGGAGCTGATGACAGTGCTGTCTAGACTGGCAGATGTGCGCATCCAAGGC c.4860
V S R E E L M T V L S R L A D V R I Q G p.1620
. . . . . . g.186986
CTCTACTTCACAGAGACTCAAAGGCTCACCCTGAGCGAGGTGGGGCTAGAGGAAGCCTCT c.4920
L Y F T E T Q R L T L S E V G L E E A S p.1640
. . . . . . g.187046
GACACAGGAAGTGGGCGCATAGCACTTGCTGTGGAAATCTGTGCCTGCCCCCCTGCCTAC c.4980
D T G S G R I A L A V E I C A C P P A Y p.1660
. | 39 . . . . g.191738
GCTGGTGACTCTTGTCAG | GGTTGTAGCCCTGGATACTATCGGGATCATAAAGGCTTGTAT c.5040
A G D S C Q | G C S P G Y Y R D H K G L Y p.1680
. . . . . . g.191798
ACCGGACGGTGTGTTCCCTGCAATTGCAACGGACATTCAAATCAATGCCAGGATGGCTCA c.5100
T G R C V P C N C N G H S N Q C Q D G S p.1700
. | 40 . . . . . g.197386
GGCATATGTGTT | AACTGTCAGCACAACACCGCGGGAGAGCACTGTGAACGCTGCCAGGAG c.5160
G I C V | N C Q H N T A G E H C E R C Q E p.1720
. . . . . . g.197446
GGCTACTATGGCAACGCCGTCCACGGATCCTGCAGGGCCTGCCCATGTCCTCACACTAAC c.5220
G Y Y G N A V H G S C R A C P C P H T N p.1740
| 41 . . . . . . g.200233
AG | CTTTGCCACTGGCTGTGTGGTGAATGGGGGAGACGTGCGGTGCTCCTGCAAAGCTGGG c.5280
S | F A T G C V V N G G D V R C S C K A G p.1760
. . | 42 . . . . g.205450
TACACAGGAACACAGTGTGAAAG | GTGTGCACCGGGATATTTCGGGAATCCCCAGAAATTC c.5340
Y T G T Q C E R | C A P G Y F G N P Q K F p.1780
. . . . . . g.205510
GGAGGTAGCTGCCAACCATGCAGTTGTAACAGCAATGGCCAGCTGGGCAGCTGTCATCCC c.5400
G G S C Q P C S C N S N G Q L G S C H P p.1800
. | 43 . . . . . g.209750
CTGACTGGAG | ACTGCATAAACCAAGAACCCAAAGATAGCAGCCCTGCAGAAGAATGTGAT c.5460
L T G D | C I N Q E P K D S S P A E E C D p.1820
| 44 . . . . . . g.210368
G | ATTGCGACAGCTGTGTGATGACCCTCCTGAACGACCTGGCCACCATGGGCGAGCAGCTC c.5520
D | C D S C V M T L L N D L A T M G E Q L p.1840
. . . . . . g.210428
CGCCTGGTCAAGTCTCAGCTGCAGGGCCTGAGTGCCAGCGCAGGGCTTCTGGAGCAGATG c.5580
R L V K S Q L Q G L S A S A G L L E Q M p.1860
. . . | 45 . . . g.214167
AGGCACATGGAGACCCAGGCCAAGGACCTGAGG | AATCAGTTGCTCAACTACCGTTCTGCC c.5640
R H M E T Q A K D L R | N Q L L N Y R S A p.1880
. . . . . . g.214227
ATTTCAAATCATGGATCAAAAATAGAAGGCCTGGAAAGAGAACTGACTGATTTGAATCAA c.5700
I S N H G S K I E G L E R E L T D L N Q p.1900
. . | 46 . . . . g.214392
GAATTTGAGACTTTGCAAGAAAAG | GCTCAAGTAAATTCCAGAAAAGCACAAACATTAAAC c.5760
E F E T L Q E K | A Q V N S R K A Q T L N p.1920
. . . . . . g.214452
AACAATGTTAATCGGGCAACACAAAGCGCAAAAGAACTGGATGTGAAGATTAAAAATGTC c.5820
N N V N R A T Q S A K E L D V K I K N V p.1940
. | 47 . . . . . g.214734
ATCCGGAATGTGCACA | TTCTTTTAAAGCAGATCTCTGGGACAGATGGAGAGGGAAACAAC c.5880
I R N V H I | L L K Q I S G T D G E G N N p.1960
. . . . . . g.214794
GTGCCTTCAGGTGACTTTTCCAGAGAGTGGGCTGAAGCCCAGCGCATGATGAGGGAACTG c.5940
V P S G D F S R E W A E A Q R M M R E L p.1980
. . . . . . g.214854
CGGAACAGGAACTTTGGAAAGCACCTCAGAGAAGCAGAAGCTGATAAAAGGGAGTCGCAG c.6000
R N R N F G K H L R E A E A D K R E S Q p.2000
| 48 . . . . . . g.216585
CTCT | TGCTGAACCGGATAAGGACCTGGCAGAAAACCCACCAGGGGGAGAACAATGGGCTT c.6060
L L | L N R I R T W Q K T H Q G E N N G L p.2020
. . . . . . g.216645
GCTAACAGTATCCGGGATTCTTTAAATGAATACGAAGCCAAACTCAGTGACCTTCGTGCT c.6120
A N S I R D S L N E Y E A K L S D L R A p.2040
. . . . . . g.216705
CGGCTGCAGGAGGCAGCTGCCCAAGCCAAGCAGGCAAATGGCTTGAACCAAGAAAACGAG c.6180
R L Q E A A A Q A K Q A N G L N Q E N E p.2060
. . | 49 . . . . g.218450
AGAGCTTTGGGAGCCATTCAG | AGACAAGTGAAAGAAATAAATTCCCTGCAGAGTGATTTC c.6240
R A L G A I Q | R Q V K E I N S L Q S D F p.2080
. . . . . . g.218510
ACCAAGTATCTAACCACTGCAGACTCATCTTTGTTGCAAACCAACATTGCGCTGCAGCTG c.6300
T K Y L T T A D S S L L Q T N I A L Q L p.2100
. | 50 . . . . g.219377
ATGGAGAAAAGCCAGAAG | GAATATGAAAAATTAGCTGCCAGTTTAAATGAAGCAAGACAA c.6360
M E K S Q K | E Y E K L A A S L N E A R Q p.2120
. . . . . . g.219437
GAACTAAGTGACAAAGTAAGAGAACTTTCCAGATCTGCTGGCAAAACATCCCTTGTGGAG c.6420
E L S D K V R E L S R S A G K T S L V E p.2140
. . . . . | 51 . g.219962
GAGGCAGAAAAGCACGCGCGGTCCTTACAAGAGCTGGCAAAGCAGCTGGAAGA | GATCAAG c.6480
E A E K H A R S L Q E L A K Q L E E | I K p.2160
. . . . . . g.220022
AGAAACGCCAGCGGGGATGAGCTGGTGCGCTGTGCTGTGGATGCCGCCACCGCCTACGAG c.6540
R N A S G D E L V R C A V D A A T A Y E p.2180
. . . . . . g.220082
AACATCCTCAATGCCATCAAAGCGGCCGAGGACGCAGCCAACAGGGCTGCCAGTGCATCT c.6600
N I L N A I K A A E D A A N R A A S A S p.2200
. | 52 . . . . . g.220969
GAATCTGCCCTCCAG | ACAGTGATAAAGGAAGATCTGCCAAGAAAAGCTAAAACCCTGAGT c.6660
E S A L Q | T V I K E D L P R K A K T L S p.2220
. . . . . | 53 g.222954
TCCAACAGTGATAAACTGTTAAATGAAGCCAAGATGACACAAAAGAAGCTAAAGCAAG | AA c.6720
S N S D K L L N E A K M T Q K K L K Q E | p.2240
. . . . . . g.223014
GTCAGTCCAGCTCTCAACAACCTACAGCAAACCCTGAATATTGTGACAGTTCAGAAAGAA c.6780
V S P A L N N L Q Q T L N I V T V Q K E p.2260
. . . . . | 54 . g.223163
GTGATAGACACCAATCTCACAACTCTCCGAGATGGTCTTCATGGGATACAGAGAG | GTGAT c.6840
V I D T N L T T L R D G L H G I Q R G | D p.2280
. . . . . . g.223223
ATTGATGCTATGATCAGTAGTGCAAAGAGCATGGTCAGAAAGGCCAACGACATCACAGAT c.6900
I D A M I S S A K S M V R K A N D I T D p.2300
. . . . . . g.223283
GAGGTTCTGGATGGGCTCAACCCCATCCAGACAGATGTGGAAAGAATTAAGGACACCTAT c.6960
E V L D G L N P I Q T D V E R I K D T Y p.2320
. . . . . | 55 . g.224560
GGGAGGACACAGAACGAAGACTTCAAAAAGGCTCTGACTGATGCAGATAACTCGG | TGAAT c.7020
G R T Q N E D F K K A L T D A D N S V | N p.2340
. . . . . . g.224620
AAGTTAACCAACAAACTACCTGATCTTTGGCGCAAGATTGAAAGTATCAACCAACAGCTG c.7080
K L T N K L P D L W R K I E S I N Q Q L p.2360
. . . . . . g.224680
TTGCCCTTGGGAAACATCTCTGACAACATGGACAGAATACGAGAACTAATTCAGCAGGCC c.7140
L P L G N I S D N M D R I R E L I Q Q A p.2380
. | 56 . . . . g.228155
AGAGATGCTGCCAGTAAG | GTTGCTGTCCCCATGAGGTTCAATGGTAAATCTGGAGTCGAA c.7200
R D A A S K | V A V P M R F N G K S G V E p.2400
. . . . . . g.228215
GTCCGACTGCCAAATGACCTGGAAGATTTGAAAGGATATACATCTCTGTCCTTGTTTCTC c.7260
V R L P N D L E D L K G Y T S L S L F L p.2420
. . . . . . g.228275
CAAAGGCCCAACTCAAGAGAAAATGGGGGTACTGAGAATATGTTTGTGATGTACCTTGGA c.7320
Q R P N S R E N G G T E N M F V M Y L G p.2440
| 57 . . . . . g.229863
AATAAAGAT | GCCTCCCGGGACTACATCGGCATGGCAGTTGTGGATGGCCAGCTCACCTGT c.7380
N K D | A S R D Y I G M A V V D G Q L T C p.2460
. . . . . . g.229923
GTCTACAACCTGGGGGACCGTGAGGCTGAACTCCAAGTGGACCAGATCTTGACCAAGAGT c.7440
V Y N L G D R E A E L Q V D Q I L T K S p.2480
. . . . | 58 . . g.230119
GAGACTAAGGAGGCAGTTATGGATCGGGTGAAATTTCAGAG | AATTTATCAGTTTGCAAGG c.7500
E T K E A V M D R V K F Q R | I Y Q F A R p.2500
. . . . . . g.230179
CTTAATTACACCAAAGGAGCCACATCCAGTAAACCAGAAACACCCGGAGTCTATGACATG c.7560
L N Y T K G A T S S K P E T P G V Y D M p.2520
. . . . . . g.230239
GATGGTAGAAATAGCAATACACTCCTTAATTTGGATCCTGAAAATGTTGTATTTTATGTT c.7620
D G R N S N T L L N L D P E N V V F Y V p.2540
. . | 59 . . . . g.230727
GGAGGTTACCCACCTGATTTTAAA | CTTCCCAGTCGACTAAGTTTCCCTCCATACAAAGGT c.7680
G G Y P P D F K | L P S R L S F P P Y K G p.2560
. . . . . . g.230787
TGTATTGAATTAGATGACCTCAATGAAAATGTTCTGAGCTTGTACAACTTCAAAAAAACA c.7740
C I E L D D L N E N V L S L Y N F K K T p.2580
. . . | 60 . . g.231975
TTCAATCTCAACACAACTGAAGTGGAGCCTTGTAGAAG | GAGGAAGGAAGAGTCAGACAAA c.7800
F N L N T T E V E P C R R | R K E E S D K p.2600
. . . . . . g.232035
AATTATTTTGAAGGTACGGGCTATGCTCGAGTTCCAACTCAACCACATGCTCCCATCCCA c.7860
N Y F E G T G Y A R V P T Q P H A P I P p.2620
. . . . . . g.232095
ACCTTTGGACAGACAATTCAGACCACCGTGGATAGAGGCTTGCTGTTCTTTGCAGAAAAC c.7920
T F G Q T I Q T T V D R G L L F F A E N p.2640
| 61 . . . . . . g.236394
GGG | GATCGCTTCATATCTCTAAATATAGAAGATGGCAAGCTCATGGTGAGATACAAACTG c.7980
G | D R F I S L N I E D G K L M V R Y K L p.2660
. . . . . . g.236454
AATTCAGAGCTACCAAAAGAGAGAGGAGTTGGAGACGCCATAAACAACGGCAGAGACCAT c.8040
N S E L P K E R G V G D A I N N G R D H p.2680
| 62 . . . . . . g.236911
TCG | ATTCAGATCAAAATTGGAAAACTCCAAAAGCGTATGTGGATAAATGTGGACGTTCAA c.8100
S | I Q I K I G K L Q K R M W I N V D V Q p.2700
. . . . . . g.236971
AACACTATAATTGATGGTGAAGTATTTGATTTCAGCACATATTATCTGGGAGGAATTCCA c.8160
N T I I D G E V F D F S T Y Y L G G I P p.2720
. | 63. . . . . g.243568
ATTGCAATCAGGGAAAG | ATTTAACATTTCTACGCCTGCTTTCCGAGGCTGCATGAAAAAT c.8220
I A I R E R | F N I S T P A F R G C M K N p.2740
. . . . . . g.243628
TTGAAGAAAACCAGTGGTGTCGTTAGATTGAATGATACTGTGGGAGTAACCAAAAAGTGC c.8280
L K K T S G V V R L N D T V G V T K K C p.2760
. | 64 . . . . . g.244072
TCGGAAGACTGGAAG | CTTGTGCGATCTGCCTCATTCTCCAGAGGAGGACAATTGAGTTTC c.8340
S E D W K | L V R S A S F S R G G Q L S F p.2780
. . . . . . g.244132
ACTGATTTGGGCTTACCACCTACTGACCACCTCCAGGCCTCATTTGGATTTCAGACCTTT c.8400
T D L G L P P T D H L Q A S F G F Q T F p.2800
. . . | 65 . . . g.246488
CAACCCAGTGGCATATTATTAGATCATCAGACATGG | ACAAGGAACCTGCAGGTCACTCTG c.8460
Q P S G I L L D H Q T W | T R N L Q V T L p.2820
. . . . . . g.246548
GAAGATGGTTACATTGAATTGAGCACCAGCGATAGCGGCAGCCCAATTTTTAAATCTCCA c.8520
E D G Y I E L S T S D S G S P I F K S P p.2840
. . . . . | 66 . g.247566
CAGACGTATATGGATGGTTTACTGCATTATGTATCTGTAATAAGCGACAACTCTGG | ACTA c.8580
Q T Y M D G L L H Y V S V I S D N S G | L p.2860
. . . . . . g.247626
CGGCTTCTCATCGATGACCAGCTTCTGAGAAATAGCAAAAGGCTAAAACACATTTCAAGT c.8640
R L L I D D Q L L R N S K R L K H I S S p.2880
. . . . . . g.247686
TCCCGGCAGTCTCTGCGTCTGGGCGGGAGCAATTTTGAGGGTTGTATTAGCAATGTTTTT c.8700
S R Q S L R L G G S N F E G C I S N V F p.2900
| 67 . . . . . g.249236
GTCCAGAG | GTTATCACTGAGTCCTGAAGTCCTAGATTTGACCAGTAACTCTCTCAAGAGA c.8760
V Q R | L S L S P E V L D L T S N S L K R p.2920
. . . . . . g.249296
GATGTGTCCCTGGGAGGCTGCAGTTTAAACAAACCACCTTTTCTAATGTTGCTTAAAGGT c.8820
D V S L G G C S L N K P P F L M L L K G p.2940
. . . . | 68 . . g.254643
TCTACCAGGTTTAACAAGACCAAGACTTTTCGTATCAACCAG | CTGTTGCAGGACACACCA c.8880
S T R F N K T K T F R I N Q | L L Q D T P p.2960
. . . . . . g.254703
GTGGCCTCCCCAAGGAGCGTGAAGGTGTGGCAAGATGCTTGCTCACCACTTCCCAAGACC c.8940
V A S P R S V K V W Q D A C S P L P K T p.2980
. . . . . . g.254763
CAGGCCAATCATGGAGCCCTCCAGTTTGGGGACATTCCCACCAGCCACTTGCTATTCAAG c.9000
Q A N H G A L Q F G D I P T S H L L F K p.3000
. . | 69 . . . . g.259224
CTTCCTCAGGAGCTGCTGAAACCCAG | GTCACAGTTTGCTGTGGACATGCAGACAACATCC c.9060
L P Q E L L K P R | S Q F A V D M Q T T S p.3020
. . . . . . g.259284
TCCAGAGGACTGGTGTTTCACACGGGCACTAAGAACTCCTTTATGGCTCTTTATCTTTCA c.9120
S R G L V F H T G T K N S F M A L Y L S p.3040
. . . . . . g.259344
AAAGGACGTCTGGTCTTTGCACTGGGGACAGATGGGAAAAAATTGAGGATCAAAAGCAAG c.9180
K G R L V F A L G T D G K K L R I K S K p.3060
. . . | 70 . . . g.261576
GAGAAATGCAATGATGGGAAATGGCACACG | GTGGTGTTTGGCCATGATGGGGAAAAGGGG c.9240
E K C N D G K W H T | V V F G H D G E K G p.3080
. . . . . . g.261636
CGCTTGGTTGTGGATGGACTGAGGGCCCGGGAGGGAAGTTTGCCTGGAAACTCCACCATC c.9300
R L V V D G L R A R E G S L P G N S T I p.3100
. . . . . | 71 . g.265176
AGCATCAGAGCGCCAGTTTACCTGGGATCACCTCCATCAGGGAAACCAAAG | AGCCTCCCC c.9360
S I R A P V Y L G S P P S G K P K | S L P p.3120
. . . . . . g.265236
ACAAACAGCTTTGTGGGATGCCTGAAGAACTTTCAGCTGGATTCAAAACCCTTGTATACC c.9420
T N S F V G C L K N F Q L D S K P L Y T p.3140
. . . . . . g.265296
CCTTCTTCAAGCTTCGGGGTGTCTTCCTGCTTGGGTGGTCCTTTGGAGAAAGGCATTTAT c.9480
P S S S F G V S S C L G G P L E K G I Y p.3160
. . . | 72 . . . g.265460
TTCTCTGAAGAAGGAGGTCATGTCGTCTTGG | CTCACTCTGTATTGTTGGGGCCAGAATTT c.9540
F S E E G G H V V L A | H S V L L G P E F p.3180
. . . . . . g.265520
AAGCTTGTTTTCAGCATCCGCCCAAGAAGTCTCACTGGGATCCTAATACACATCGGAAGT c.9600
K L V F S I R P R S L T G I L I H I G S p.3200
. . . . | 73 . . g.267104
CAGCCCGGGAAGCACTTATGTGTTTACCTGGAGGCAGGAAAG | GTCACGGCCTCTATGGAC c.9660
Q P G K H L C V Y L E A G K | V T A S M D p.3220
. . . . . . g.267164
AGTGGGGCAGGTGGGACCTCAACGTCGGTCACACCAAAGCAGTCTCTGTGTGATGGACAG c.9720
S G A G G T S T S V T P K Q S L C D G Q p.3240
. | 74 . . . . . g.268436
TGGCACTCGGTGGCAG | TCACCATAAAACAACACATCCTGCACCTGGAACTGGACACAGAC c.9780
W H S V A V | T I K Q H I L H L E L D T D p.3260
. . . . . . g.268496
AGTAGCTACACAGCTGGACAGATCCCCTTCCCACCTGCCAGCACTCAAGAGCCACTACAC c.9840
S S Y T A G Q I P F P P A S T Q E P L H p.3280
. | 75 . . . . . g.269949
CTTGGAGGTGCTCCAG | CCAATTTGACGACACTGAGGATCCCTGTGTGGAAATCATTCTTT c.9900
L G G A P A | N L T T L R I P V W K S F F p.3300
. . . . . . g.270009
GGCTGTCTGAGGAATATTCATGTCAATCACATCCCTGTCCCTGTCACTGAAGCCTTGGAA c.9960
G C L R N I H V N H I P V P V T E A L E p.3320
. . . . g.270051
GTCCAGGGGCCTGTCAGTCTGAATGGTTGTCCTGACCAGTAA c.10002
V Q G P V S L N G C P D Q X p.3333
. . . . . . g.270111
cccaagcctatttcacagcaaggaaattcaccttcaaaagcactgattacccaatgcacc c.*60
. . . . . . g.270171
tccctccccagctcgagatcattcttcactcaggacacaaaccagacaggtttaatagcg c.*120
. . . . . . g.270231
aatctaattttgaattctgaccatggatacccatcactttggcattcagtgctacatgtg c.*180
. . . . . . g.270291
tattttatataaaaatcccatttcttgaagataaaaaaattgttattcaaattgttatgc c.*240
. . . . . . g.270351
acagaatgtttttggtaatattaatttccactaaaaaattaaatgtcttttaagaaacat c.*300
. . . . . . g.270411
tcttttccacttgttaaaaaaattaaatatattttaaagcactttaagaatatgaaactt c.*360
. . . . . g.270469
tcatatatgttaaaggattataatttatggaattaaaaaatgcagtgtagtccttaaa c.*418
(downstream sequence)
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