Leber congenital amaurosis 5 (LCA5) - 6078 nt intron 02 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.17327
gtaattcttggatcagaagagactttaaacagaaaatgtttatgtagtatactcagagaa  c.-192+60

         .         .         .         .         .         .  g.17387
aaaaatatattacctcagtaatgcgagaacagaataattattttaaaaatcggaacaaca  c.-192+120

         .         .         .         .         .         .  g.17447
aagagttcttggaaatgaagatattggcataattttttaaatgatggtttagaagataaa  c.-192+180

         .         .         .         .         .         .  g.17507
ttgaaaaaaactctttgaaaatagaagaaaaaagtagccttattatttaactaggagaaa  c.-192+240

         .         .         .         .         .         .  g.17567
tttcaaaaagaaaatgaaaaaaaggttaattatctgaagaacaatataagaaaacctctg  c.-192+300

         .         .         .         .         .         .  g.17627
gtgcttaaagatacagatttccagattgaaaggaagagggggagaaagggtcccaacaca  c.-192+360

         .         .         .         .         .         .  g.17687
acaaaaaaggctcactggtatttatgttcttgtgaaatttcagtataacaagagggaaag  c.-192+420

         .         .         .         .         .         .  g.17747
ccctaaaagcacctagggagcgaaaaaaggaaaaagataacctataaaggaatgagaatc  c.-192+480

         .         .         .         .         .         .  g.17807
tgttttagtataactagagtgtaaattccctaagggaatttactttctgttcattaattg  c.-192+540

         .         .         .         .         .         .  g.17867
actttctgttcattactgctacatagagctcaagaaatatattttgaataaaagagtgac  c.-192+600

         .         .         .         .         .         .  g.17927
tgtaacatgtgtcacaaataatgctgatatattttgaataaaagaatgattataacatgt  c.-192+660

         .         .         .         .         .         .  g.17987
ctcacaaacaatgctgagggtttaagacagtgaagcagtgtcttcaaagttctgagagaa  c.-192+720

         .         .         .         .         .         .  g.18047
aataacctagaatttggaatgtatgaaaagtaacaagtgtgaggtaaaataacgacattc  c.-192+780

         .         .         .         .         .         .  g.18107
tcaggcatgcaaggacttagaacatttacttcctaaaccataaaccctttctgaagaaat  c.-192+840

         .         .         .         .         .         .  g.18167
tatttaaggatgtggaccagtaaaatgatgatggaaactaataaacatgacatggtctaa  c.-192+900

         .         .         .         .         .         .  g.18227
atgaaatagtgcactaactcaggaattcaataaaagtaattccagaatgacagcagtaca  c.-192+960

         .         .         .         .         .         .  g.18287
ataggtctagaatgtagttggtttaaattagaataggaaattcgaggaaaatgtctttag  c.-192+1020

         .         .         .         .         .         .  g.18347
gaggaagaatggaatggacttcaggctattggtagattaagaagctggtagatattagtg  c.-192+1080

         .         .         .         .         .         .  g.18407
atataagaaacgttttttccacttaataggaaaaaaaagacaattaggaattctaagaga  c.-192+1140

         .         .         .         .         .         .  g.18467
aaaaccatgcataaccaacatgtggttgcatgttgcaatcatataaaatgaagggtgagt  c.-192+1200

         .         .         .         .         .         .  g.18527
taaatactcatctttcatagtctaaaattgctaacttaagatatagcgtacatataaagg  c.-192+1260

         .         .         .         .         .         .  g.18587
tataagccattaaaatggttgtttcagggagcaggacttggataatgggacattggatat  c.-192+1320

         .         .         .         .         .         .  g.18647
ttcctttatttacttatttttatggaactatgtggaagtatttgagggggggcagggaga  c.-192+1380

         .         .         .         .         .         .  g.18707
gaacactgtgtgtattcttcccctttgccatagaaagttggtgggcccctcggatttaga  c.-192+1440

         .         .         .         .         .         .  g.18767
taggatagggagttcctaggaagctacttctgctacgcaaatgtaagcagaaataatttt  c.-192+1500

         .         .         .         .         .         .  g.18827
catctttaccatgtaaccaacttttaattatattattggaatttaaactgaaagttgttg  c.-192+1560

         .         .         .         .         .         .  g.18887
acaaagaacatcagttataatttactgagcatctcatatgtgtttgaattgctaatataa  c.-192+1620

         .         .         .         .         .         .  g.18947
ttgttgatatttaccaagttcttactgtgtaatagttattgaattatcccatttaatcct  c.-192+1680

         .         .         .         .         .         .  g.19007
cacaagaattctctaaagtagttactagtaatattaccattttacattttaaaaagttag  c.-192+1740

         .         .         .         .         .         .  g.19067
acttacattgagaggtaaacgctccagatttacatagctaatgagtgctagagccactta  c.-192+1800

         .         .         .         .         .         .  g.19127
cttgctgttatcattatcctttttttctagacaatttttttcatgtgtaaatattttttc  c.-192+1860

         .         .         .         .         .         .  g.19187
acttgattgcagagtgaaagattcaggctgatttatgtatatttttaatattagtacttg  c.-192+1920

         .         .         .         .         .         .  g.19247
ccataggaattgttgattttagatacagttgctaattttgatagagactgcgattgctag  c.-192+1980

         .         .         .         .         .         .  g.19307
gcacatcagaagtaaaatcaaagttgtgttttttgttgctttttaaaatatttcttctaa  c.-192+2040

         .         .         .         .         .         .  g.19367
agaaaatatcaaacaaatacagaattggaaatattagaataattaattcaaaagtcttct  c.-192+2100

         .         .         .         .         .         .  g.19427
atcagtttacataatcatcaactcacagtcaattttgtataatctttacccttacccatt  c.-192+2160

         .         .         .         .         .         .  g.19487
ttcctttgggttaattttgaagcgaaccccagacaattttatttataaatatttgaacat  c.-192+2220

         .         .         .         .         .         .  g.19547
atatctctaaaagataaagattctttaaaaaaaaaaaaagacagtatcaacatctcacct  c.-192+2280

         .         .         .         .         .         .  g.19607
aaaacaatataattccttaatattaaatatgtggtcagggctgggcgtggtggcgcatgc  c.-192+2340

         .         .         .         .         .         .  g.19667
ctgtagttctggctactcaggaggtgggaggattgcctgagcccaggagttcaaggttgc  c.-192+2400

         .         .         .         .         .         .  g.19727
agtaagccatgatcatgccactgcactccagtctaggcaacagagcaaaactctgtctct  c.-192+2460

         .         .         .         .         .         .  g.19787
aataacaataaatagtgtttaaattttcttgattataattttttaatacaatttattgta  c.-192+2520

         .         .         .         .         .         .  g.19847
atcaggagtgaaatactgtccatggattgcacttggtggttgtttcttgagactttctta  c.-192+2580

         .         .         .         .         .         .  g.19907
ttatataaataccctcttctctcctctctcttgttctgcttgcaatttcttcattaaaga  c.-192+2640

         .         .         .         .         .         .  g.19967
atctagtttttcctgtagagtttgctacagtctggattttttctgattgcttctttgtac  c.-192+2700

         .         .         .         .         .         .  g.20027
ctcgatctctctcctactttcagtgtcatttacatttacaggcttcagtagattcagatt  c.-192+2760

         .         .         .         .         .         .  g.20087
taatttttgtggggaggaggggagattacttcagaagtattattgtgtcctatcagagac  c.-192+2820

         .         .         .         .         .         .  g.20147
atggtgtctggctgttacttttctgtagcaatacagccatttatgatcattatatagctt  c.-192+2880

         .         .         .         .         .         .  g.20207
cattatttcattaggagttgtgaaatgtcactcgtctaattctgtcattttaatatttta  c.-192+2940

         .         .         .         .         .         .  g.20267
ttttttatttgttaactagaataattccataaagaaatacttccccccatctaatatttt  c.-192+3000

         .         .         .           g.20306
gttattttcagataatagctttttaagagtataggcaag  c.-192+3039

--------------------- middle of intron ---------------------
        g.20307               .         .         .           g.20345
        c.-191-3039  atgcatgtgtgattttttttatatataaattttttaatt  c.-191-3001

.         .         .         .         .         .           g.20405
aaatgagatggtttcctagaatcttccaaaggtgaataattaggtttttgtaaaatatat  c.-191-2941

.         .         .         .         .         .           g.20465
catatgaactcaaggatttaaacacttttgatatgtttaaatcgtttgctgatataattc  c.-191-2881

.         .         .         .         .         .           g.20525
gtattgataacaaatttgccttgtctttggcaagtagttccttgaagttggctcctgagt  c.-191-2821

.         .         .         .         .         .           g.20585
ccatttgactgacactccatcagtagtatctgatagcgtccttgctttctaggatgacca  c.-191-2761

.         .         .         .         .         .           g.20645
ggttgctatattcttagatttattttgtgtgtttcctccctcagaaatggaatcaggcat  c.-191-2701

.         .         .         .         .         .           g.20705
ttcacaaggaactttaggttctttcaatgggaagtggcatatagacactagatctgggtt  c.-191-2641

.         .         .         .         .         .           g.20765
ctaggaatgttcctagttttttccttgtttctgggatttttcagtggacaaagtgaagaa  c.-191-2581

.         .         .         .         .         .           g.20825
gttttttttaaataaataaaagccatcataaattcatactgacactcataattcaaattt  c.-191-2521

.         .         .         .         .         .           g.20885
tgaatgtcaaagttttaaaactcacattagtttatatttacttcttccatgttgaaaatt  c.-191-2461

.         .         .         .         .         .           g.20945
ctagtgcccagctgcaccaataataattactcatttgttttatttcacagtacatgtgta  c.-191-2401

.         .         .         .         .         .           g.21005
taagtctgagaataaaatatctgagtagcaaaatatgattattggaatggctttaaaaat  c.-191-2341

.         .         .         .         .         .           g.21065
tttttttggtcattatgtctcactaggaatataaagtcaagttattgtgttttaaagtca  c.-191-2281

.         .         .         .         .         .           g.21125
ttcgaactggttaatttgtgtggttttaccaccaaccatgtatgtagattgatttatcta  c.-191-2221

.         .         .         .         .         .           g.21185
attttattttgatttatgggaattgcttttcaaaaatctcatttctaaaaatcgtaattt  c.-191-2161

.         .         .         .         .         .           g.21245
ccaatgttaaatctacaaaaattatatacaaagaaacctagcttctatcccttttcctaa  c.-191-2101

.         .         .         .         .         .           g.21305
actctgcttccttccttcccctgtagcagtgttgtttagtaagctaactaccagcacatg  c.-191-2041

.         .         .         .         .         .           g.21365
tggcttcttaaattaaaattaattaaaattaaataaaattaaaaattagttcttcagtta  c.-191-1981

.         .         .         .         .         .           g.21425
caccagcaacatctcaagtgcttgatagccacatgtggccagccaccatcttgaacagca  c.-191-1921

.         .         .         .         .         .           g.21485
cagactatagaacatttccatcctggctgaaagttctgttggacagccctaccctagcga  c.-191-1861

.         .         .         .         .         .           g.21545
acccattttatttttcttaattatttgatttctccttctacttaaatatataaaaattat  c.-191-1801

.         .         .         .         .         .           g.21605
gtatgttacccttcttccttgataaatggtagcatactgcaggcttttttccatctttct  c.-191-1741

.         .         .         .         .         .           g.21665
tttctctgtatatcctagagattatgccagactatgagcaatacacagagatagtcttca  c.-191-1681

.         .         .         .         .         .           g.21725
ttcctttaatagcttcatagtattacatatacttcattgtgtggatgtttatagtttgta  c.-191-1621

.         .         .         .         .         .           g.21785
agaccagttcttattggtcattttattgttttagttttctacttacaatagtgctacaat  c.-191-1561

.         .         .         .         .         .           g.21845
aaatagtgctgccttgtgcatgtcctttcatatgttattactagaagaacgatactttta  c.-191-1501

.         .         .         .         .         .           g.21905
atactaatttcatcagagatgtttgtttcttctaaattggattataaaagtaatccaatt  c.-191-1441

.         .         .         .         .         .           g.21965
ttgttgtgttagaaaaccagaatatgttaatggagagataaaattatctaaaatccatgt  c.-191-1381

.         .         .         .         .         .           g.22025
tgtcaggcagggactattttggtgttcttgtattccttgcttggaaaatgttttcagttt  c.-191-1321

.         .         .         .         .         .           g.22085
ctgaattcagatagggataatagtattttcagtatttttttaatgaatgtgtgtagttga  c.-191-1261

.         .         .         .         .         .           g.22145
gatcatactgtatgcactaatttgaattttttctttatgataatagtataagcattttcc  c.-191-1201

.         .         .         .         .         .           g.22205
ttaaatacagactttttgtaaacattatcagtagcttcatgatattttgctgtatggatt  c.-191-1141

.         .         .         .         .         .           g.22265
tataaaatacttaattattcctcaatgattaggcatttaatttgcttccattaaaaaaaa  c.-191-1081

.         .         .         .         .         .           g.22325
agtactgtactacattaaatatttgcacataacttttctcctaattttagcattatttta  c.-191-1021

.         .         .         .         .         .           g.22385
ttggagtccagaaattattgtatcaaaggttaaagcataattaaagtgacaatacatttt  c.-191-961

.         .         .         .         .         .           g.22445
gccagtgtttttccaaaaaaactctagggatctttttctgatagcaactctgacagcatt  c.-191-901

.         .         .         .         .         .           g.22505
gagtgttattatttcgaaaaatctttaataatttatgttgcctttttggagtcttatata  c.-191-841

.         .         .         .         .         .           g.22565
ttttgcccatttaattgttttacctcatatttttctcaaaggatgatatatttatgtatt  c.-191-781

.         .         .         .         .         .           g.22625
gaagatgataacaattttttgtcatgtttgcaaatgtttctcatcaagtattttttcttt  c.-191-721

.         .         .         .         .         .           g.22685
tagtttttaaaaaatgtactttagttatacattttttgtgtggtcaatcttggatatttt  c.-191-661

.         .         .         .         .         .           g.22745
tattctttattcttttttttttttttttttgagatggagtctcattctgtcaccaggctg  c.-191-601

.         .         .         .         .         .           g.22805
gagttcagtggcgccatcttggctaactgcaacctcggcctcctgggttcgagcgattct  c.-191-541

.         .         .         .         .         .           g.22865
cctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgcccagctaatt  c.-191-481

.         .         .         .         .         .           g.22925
tttgtatttttagtggagatggggtttcaccttgttggtttcttgacctcatgatctgcc  c.-191-421

.         .         .         .         .         .           g.22985
cgcctcggcctcccaaagtgtatttattcttattagcaggtttgttctttactatcacca  c.-191-361

.         .         .         .         .         .           g.23045
ctacttccactcccactgcctccctgcctaaaaaagaaaaaactggtgatttgatcatta  c.-191-301

.         .         .         .         .         .           g.23105
ttgtccattaaaattcagcatttgcctctagtataactcttaaaattaaacagtcaactt  c.-191-241

.         .         .         .         .         .           g.23165
cagttaacatttattcagaagtagttgtatgtcaggtacttattatctatctaggctatg  c.-191-181

.         .         .         .         .         .           g.23225
acagtctgtattttctccaaatactgtaagtaacttatctgtgaaaatatagataaattg  c.-191-121

.         .         .         .         .         .           g.23285
tagcctcttttaaaaattgtaagctatatattattttgcttttagtgtctttcattgtaa  c.-191-61

.         .         .         .         .         .           g.23345
ttaactgtagaaactgtagagactgtatgataagtctcctttccccttccttaatttcag  c.-191-1


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