LIM homeobox 2 (LHX2) - 5573 nt intron 03 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.8976
gtgagtgcgcggcgcacgaagcgcccccatagggttgggggaaagtgtgcggcctcgacg  c.727+60

         .         .         .         .         .         .  g.9036
gccgggagctggattgaatctctgtgtgctgggcaaatagcgagccttaagcaccggacg  c.727+120

         .         .         .         .         .         .  g.9096
gcctcgcagaagggacattagccccctgggcttccagactgtgcgtcctcggctggagcg  c.727+180

         .         .         .         .         .         .  g.9156
ggaggagagggtgcagtggtcccttgctgctccgggtgcagggccttgtctctgataaat  c.727+240

         .         .         .         .         .         .  g.9216
tgtttttttggagatggctttttggtttgggcctttgccccactttgctaggcaggaagt  c.727+300

         .         .         .         .         .         .  g.9276
ggcagggatggagaaagcaaggcggcgctgacgccaaacaggttttgggttggcgcggct  c.727+360

         .         .         .         .         .         .  g.9336
gagggccgggaactggggcagcgaaggaacgaggcagggcggcgagggtcccaagagaaa  c.727+420

         .         .         .         .         .         .  g.9396
gggctggctgtggcccggggcgccgagctcggcctggagtgcggcctgacctcgtgaaat  c.727+480

         .         .         .         .         .         .  g.9456
gtcccaagggcggcaggcttggggaactcgggcttggggaactcaggaaagcaaaggctg  c.727+540

         .         .         .         .         .         .  g.9516
cggttccttttgctcggcccgatcctcctttaaagacaggtctcagttttcccggacttt  c.727+600

         .         .         .         .         .         .  g.9576
ttcctccgagtttcctggcgcctgctggggtgagggccgtgaccctcggaagcgagcccc  c.727+660

         .         .         .         .         .         .  g.9636
ccgggcggggacgagaccggagcaggcctggcctcgcgccggggtggggtggggtggggt  c.727+720

         .         .         .         .         .         .  g.9696
gaggtggggggcttggttcggatttccggcatctttgaaccccaggccattcccggagaa  c.727+780

         .         .         .         .         .         .  g.9756
gctctgccccctcccgcgcccctccctgctcaggacagctgcagaggttctgagttccgg  c.727+840

         .         .         .         .         .         .  g.9816
caaatgagccgtcaacatctgcccgaagtctgcaaggcccggaaaggtttatgactctcc  c.727+900

         .         .         .         .         .         .  g.9876
gggcttccgaactagagtttatgtgcaattattttctttctttcgtttgcaacagaatta  c.727+960

         .         .         .         .         .         .  g.9936
gatttggagattttgtgttcttcttccttttccctttagtctaatgcacaagcagaaaaa  c.727+1020

         .         .         .         .         .         .  g.9996
agcaaaaacaaaaacaaacccaagactgtgcagagggtgctacggcgggaagaagtcagt  c.727+1080

         .         .         .         .         .         .  g.10056
tattttcatcttaaagaatctgagttgaatagagagggaaatgaggggcgggtgttcgct  c.727+1140

         .         .         .         .         .         .  g.10116
ccaacgaaatcgcttggaggatcatggggcgtgtgtccctgtgtgcggaactgggaggaa  c.727+1200

         .         .         .         .         .         .  g.10176
aacgcagcccccagtttggtaaatggtgaagcagcggtaggccggtcggtggcgcggatt  c.727+1260

         .         .         .         .         .         .  g.10236
taagatttgctgaaggcactaccacagatgtagctctctggaacttccatccctcctctc  c.727+1320

         .         .         .         .         .         .  g.10296
ctaccaccccccaaaaaaagacaaaaccgagttcagaccggctcccccaacaccaagccg  c.727+1380

         .         .         .         .         .         .  g.10356
cttctatttatcaagtgggtcaacttccactcggaagcacctcgcggggctcggctccag  c.727+1440

         .         .         .         .         .         .  g.10416
ggcacctggtggctggggagctgtattgttttcctgggcacggaggttcggcgccggttt  c.727+1500

         .         .         .         .         .         .  g.10476
taggattgtgcaaaaagagagtagaaggtacagagatttatttctgctttttgctgttca  c.727+1560

         .         .         .         .         .         .  g.10536
gccgccgtttgccccagcgaggtgggctggaggctgaatttcaagccttgtttaacctct  c.727+1620

         .         .         .         .         .         .  g.10596
acaagagacaccctccattcagccatctcactttctctctggcctccctctctctttttt  c.727+1680

         .         .         .         .         .         .  g.10656
tcctttccgttctctccgtcctttctctctatctctgtctctgtgtgtgtcgtgtttgtt  c.727+1740

         .         .         .         .         .         .  g.10716
cccgtgccctcctctccgaccttggccggggctcctagtcctgagagaaacggcgttcgg  c.727+1800

         .         .         .         .         .         .  g.10776
tgcgccggcggtggctatgcggctggctctttcggggctcccgggactaggttggggaaa  c.727+1860

         .         .         .         .         .         .  g.10836
gagggcatctccccggcctctcggggcccagcccagtcttcctagatctggcgtccgccc  c.727+1920

         .         .         .         .         .         .  g.10896
ttccctcccctcccgcactggcaggagagaaatggccgcagtgtgggccgcggggcagct  c.727+1980

         .         .         .         .         .         .  g.10956
aggactggaaagcggggaccctggagggtgcgatcgcggacggggtgtgcgggcgcgggt  c.727+2040

         .         .         .         .         .         .  g.11016
cgtgtgcgtgtgcgtgcagggttccgaccacggggacacgagcttgtttgtggcagtgtc  c.727+2100

         .         .         .         .         .         .  g.11076
ccacatcctgtggcccagccacgacgaccccttgcaaagcctcttgctctggggacagtc  c.727+2160

         .         .         .         .         .         .  g.11136
cctccgaggcgcggcggcaccttactgaagggcggcgagctgggggccgagtggggaggg  c.727+2220

         .         .         .         .         .         .  g.11196
ggcgccgtcggggcgccgggcgctgggcttacagcagagccgcgggccgcggggtcggaa  c.727+2280

         .         .         .         .         .         .  g.11256
agtccttccggggcggggccgcagcggcctcttcccgcagcccctcgggcccgggccccg  c.727+2340

         .         .         .         .         .         .  g.11316
gtggaacggaaacctccccctaccccgggaggggctgccagcgggctgggggtgcgaaaa  c.727+2400

         .         .         .         .         .         .  g.11376
cggcggcaggagcgggcgaggggcccgggccgcgcactttgcgcctgggtttgcgcgccg  c.727+2460

         .         .         .         .         .         .  g.11436
cggccgcgggagtcccgcgcggaccggccggacgcccggcctcccccagccccagctttt  c.727+2520

         .         .         .         .         .         .  g.11496
tgtgtgtgtgtgcctggcggcgtaattactgatttgattccaatccattatttagacaat  c.727+2580

         .         .         .         .         .         .  g.11556
tgaacctacaatctcgtctttagtaaaatgaggcgaagtcagatttgattacaggttcag  c.727+2640

         .         .         .         .         .         .  g.11616
tcccagcgacaagagctcgaaacccgatgggttaataacagatcacgagtaaattattca  c.727+2700

         .         .         .         .         .         .  g.11676
tgattttacgagctctttagctccattgaatcggcctaattgagaggaaaaaaaaaaaaa  c.727+2760

         .         .         g.11703
aggagagagaaagcccgggtcctcccc  c.727+2787

--------------------- middle of intron ---------------------
                      g.11704           .         .           g.11729
                      c.728-2786  ctcccctcggcccctcgctcctcccc  c.728-2761

.         .         .         .         .         .           g.11789
ggatccgatcctggggaatctcgacccgcccccgggcactgggggcgggagtgagggggt  c.728-2701

.         .         .         .         .         .           g.11849
tcggggcgccggccaaacctgggccccacggctgcctcccccgccgccgccccctgccct  c.728-2641

.         .         .         .         .         .           g.11909
tgcctctggccggcctcggcctcgctacttagggccggctcctttccctttttctccact  c.728-2581

.         .         .         .         .         .           g.11969
ccccttctttccccttttctctactcccccgccaataacggcttcggaaaaggcctcccc  c.728-2521

.         .         .         .         .         .           g.12029
cgcagggaccgggtctcccggagccccgggattcagctcggccaccggaccctcgccaca  c.728-2461

.         .         .         .         .         .           g.12089
agctgcgcctgtttccgggactcgctttcccctccgctctccctatttcttgctgtcttt  c.728-2401

.         .         .         .         .         .           g.12149
gtagctgtctctctgtggttctcctggctccttcgctttcttttcctctgtctgtcctct  c.728-2341

.         .         .         .         .         .           g.12209
ctttttcctggctctgtccatcttccgtccctaccccctctctctttctctccctccatt  c.728-2281

.         .         .         .         .         .           g.12269
ctgcctttctgtgtttgtctttttctctcctttctctgccctttctgtccccctcccccg  c.728-2221

.         .         .         .         .         .           g.12329
cactactaccccacctaggcggcactcagggcaggtcccttgggcccatgggggcgccgg  c.728-2161

.         .         .         .         .         .           g.12389
ggtccccacggagctcattaacagcagccaggcccaggcgggggctcggtggagggatgg  c.728-2101

.         .         .         .         .         .           g.12449
gcccaaagataccccgtagggaggctgccccacccccagtggagctggggactgggggaa  c.728-2041

.         .         .         .         .         .           g.12509
agaaaagggttgctcacctcagcgggttccaagcagttctggtggatcaggttcagaggc  c.728-1981

.         .         .         .         .         .           g.12569
atcctctgatcccctttaaattgccggacccgcgctcttcactctgggcgtgctctctgt  c.728-1921

.         .         .         .         .         .           g.12629
gggaatgcagccccgggggtgaggggacctgagtgccggtggaaagaggcccctaggagg  c.728-1861

.         .         .         .         .         .           g.12689
tgtagcccctagctaacagctccaaaggcaggggcaagacttgtatcttgcaaattctct  c.728-1801

.         .         .         .         .         .           g.12749
ctgcaaggggctcttccccatctgggcaggggaagggggaggtcaccagcagagtaaaag  c.728-1741

.         .         .         .         .         .           g.12809
tcctttggaggtagtgtggccaggcaaaatgcagcatccccagttaaattggaattttgg  c.728-1681

.         .         .         .         .         .           g.12869
gtacgtaacaaatacatttttagtgtaagtgtccccggcaatatttgcattttggaaaaa  c.728-1621

.         .         .         .         .         .           g.12929
taacgaataaatttgaaatttgtagtataagtgtcccgtgtaatatttgaattttagata  c.728-1561

.         .         .         .         .         .           g.12989
aatgacaattttttagcatagctgtgtcacctgtagtatttgaatttcaggtaaacaaca  c.728-1501

.         .         .         .         .         .           g.13049
aatacatttttagtataggtatgtcccatgcaatatttaggacatgcttatactaaaaaa  c.728-1441

.         .         .         .         .         .           g.13109
ttacttattatttttctgaaatttatatttaactgggcaacctgtattttcatttgctaa  c.728-1381

.         .         .         .         .         .           g.13169
atctagagctctgttacgggtatgtgatgagggcacaagataccttctcagttctcactt  c.728-1321

.         .         .         .         .         .           g.13229
taggcggaccgaatgtacaccccttatgaggcttaccccaaggcaagaccttaagtgtgg  c.728-1261

.         .         .         .         .         .           g.13289
catggctcgggaggtgccatgaggaggcgaccttgggaggggtcctgcaggtccccatca  c.728-1201

.         .         .         .         .         .           g.13349
gcttccaggtggctgagcaattttctgaggcccaggttttcacccatattccccaccccc  c.728-1141

.         .         .         .         .         .           g.13409
aatgccagccaggcattggcagcgtggcccccatgaggctccttgtggttagggacaggc  c.728-1081

.         .         .         .         .         .           g.13469
tccctcctcccttcgtggtgtagtggaagaaaacaaggagtactccagtgctaaatctag  c.728-1021

.         .         .         .         .         .           g.13529
gctcaacagatcaagatcaatctagctggttaccggtggtgtggcagtgtgcaagtggct  c.728-961

.         .         .         .         .         .           g.13589
tcatttcccttagcgttagtttccacatctctaaaatgggaatagtcatagccacctctc  c.728-901

.         .         .         .         .         .           g.13649
tgagaggtaatgatgtacagtgacatttgtaaagccaaacacacaccataggtgtctact  c.728-841

.         .         .         .         .         .           g.13709
acatgtttatttctgcctcggacttccttccccgtccactctgccgctctctgtggactg  c.728-781

.         .         .         .         .         .           g.13769
ccgcagatctctgaacttccccgagcctaatttgctccacttgttcacggagaaacaatc  c.728-721

.         .         .         .         .         .           g.13829
atcttacagggtagcgatgaggattaaactgcaaaatgcagtttccaacctttggcccag  c.728-661

.         .         .         .         .         .           g.13889
tgcccaaggcccaggggtccctcagtacttttgggtgtggcaaaatgaacatgaatctct  c.728-601

.         .         .         .         .         .           g.13949
gtttcagcagtttctaggtgccggtcccagacacggtagggggagacggcagaaagcact  c.728-541

.         .         .         .         .         .           g.14009
cctccttagagtgccttggaaaacaggaggagggcaggcccagagaccctgtcctgctgt  c.728-481

.         .         .         .         .         .           g.14069
gtccaaagtcaagtgacttcccttgctgagcctcagtttcaacatctgtaaaaacgggaa  c.728-421

.         .         .         .         .         .           g.14129
aaataatacctggtgctcctaggattgttttaagtacctaaagaaaatgtgcctggaaag  c.728-361

.         .         .         .         .         .           g.14189
ccctttaacacatcacctggagttcaatcggccatcaacaagtcgtagctgttgttgctg  c.728-301

.         .         .         .         .         .           g.14249
ctgctgctgctgctgctactattgttcttattgtaacataatggctcagaatgatttttg  c.728-241

.         .         .         .         .         .           g.14309
gattctcccagagccgggattcagtgctgcagttcttagcagtgtgatcctgggtggatc  c.728-181

.         .         .         .         .         .           g.14369
gctgtctctgagcctcagtgtttccatctataaaatggggatgatgtccccctttcattg  c.728-121

.         .         .         .         .         .           g.14429
tggcgcagacatgcagcagggttaaggattgaaatgtttggcagtgggtggggcgagtgt  c.728-61

.         .         .         .         .         .           g.14489
ggatttggcatggggggcgggtcaggaagttcacccaccggctctgtgtctcctccctag  c.728-1


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