(used for variant description)
(last modified December 1, 2015)
This file was created to facilitate the description of sequence variants on transcript NM_198578.3 in the LRRK2 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_011709.1, covering LRRK2 transcript NM_198578.3.
(upstream sequence)
g.5001
g c.-121
. . . . . . g.5061
cgctggctgcgggcggtgagctgagctcgcccccggggagctgtggccggcgcccctgcc c.-61
. . . . . . g.5121
ggttccctgagcagcggacgttcatgctgggagggcggcgggttggaagcaggtgccacc c.-1
. . . . . . g.5181
ATGGCTAGTGGCAGCTGTCAGGGGTGCGAAGAGGACGAGGAAACTCTGAAGAAGTTGATA c.60
M A S G S C Q G C E E D E E T L K K L I p.20
. . . . . . g.5241
GTCAGGCTGAACAATGTCCAGGAAGGAAAACAGATAGAAACGCTGGTCCAAATCCTGGAG c.120
V R L N N V Q E G K Q I E T L V Q I L E p.40
. . . | 02 . . . g.5573
GATCTGCTGGTGTTCACGTACTCCGAGCACG | CCTCCAAGTTATTTCAAGGCAAAAATATC c.180
D L L V F T Y S E H A | S K L F Q G K N I p.60
. . . . . | 03. g.12266
CATGTGCCTCTGTTGATCGTCTTGGACTCCTATATGAGAGTCGCGAGTGTGCAGCAG | GTG c.240
H V P L L I V L D S Y M R V A S V Q Q | V p.80
. . . . . . g.12326
GGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATG c.300
G W S L L C K L I E V C P G T M Q S L M p.100
. . . . | 04. . g.15628
GGACCCCAGGATGTTGGAAATGATTGGGAAGTCCTTGGTGTTCACCA | ATTGATTCTTAAA c.360
G P Q D V G N D W E V L G V H Q | L I L K p.120
. . . . . . g.15688
ATGCTAACAGTTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAGAT c.420
M L T V H N A S V N L S V I G L K T L D p.140
. | 05 . . . . . g.18002
CTCCTCCTAACTTCAG | GTAAAATCACCTTGCTGATATTGGATGAAGAAAGTGATATTTTC c.480
L L L T S G | K I T L L I L D E E S D I F p.160
. . . . . . g.18062
ATGTTAATTTTTGATGCCATGCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGA c.540
M L I F D A M H S F P A N D E V Q K L G p.180
. . . | 06 . . . g.20501
TGCAAAGCTTTACATGTGCTGTTTGAGAGAG | TCTCAGAGGAGCAACTGACTGAATTTGTT c.600
C K A L H V L F E R V | S E E Q L T E F V p.200
. . . . . . g.20561
GAGAACAAAGATTATATGATATTGTTAAGTGCGTTAACAAATTTTAAAGATGAAGAGGAA c.660
E N K D Y M I L L S A L T N F K D E E E p.220
. . . . | 07 . . g.23553
ATTGTGCTTCATGTGCTGCATTGTTTACATTCCCTAGCGATTCCTT | GCAATAATGTGGAA c.720
I V L H V L H C L H S L A I P C | N N V E p.240
. . . . . . g.23613
GTCCTCATGAGTGGCAATGTCAGGTGTTATAATATTGTGGTGGAAGCTATGAAAGCATTC c.780
V L M S G N V R C Y N I V V E A M K A F p.260
. . . . . | 08 g.29817
CCTATGAGTGAAAGAATTCAAGAAGTGAGTTGCTGTTTGCTCCATAGGCTTACATTAG | GT c.840
P M S E R I Q E V S C C L L H R L T L G | p.280
. . . . . . g.29877
AATTTTTTCAATATCCTGGTATTAAACGAAGTCCATGAGTTTGTGGTGAAAGCTGTGCAG c.900
N F F N I L V L N E V H E F V V K A V Q p.300
. . . . . | 09 g.31223
CAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCA | CT c.960
Q Y P E N A A L Q I S A L S C L A L L T | p.320
. . . . . . g.31283
GAGACTATTTTCTTAAATCAAGATTTAGAGGAAAAGAATGAGAATCAAGAGAATGATGAT c.1020
E T I F L N Q D L E E K N E N Q E N D D p.340
. . . . . . g.31343
GAGGGGGAAGAAGATAAATTGTTTTGGCTGGAAGCCTGTTACAAAGCATTAACGTGGCAT c.1080
E G E E D K L F W L E A C Y K A L T W H p.360
. . | 10 . . . . g.31493
AGAAAGAACAAGCACGTGCAG | GAGGCCGCATGCTGGGCACTAAATAATCTCCTTATGTAC c.1140
R K N K H V Q | E A A C W A L N N L L M Y p.380
. . . . | 11 . . g.32918
CAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCA | TTTCCCAGCTCATAGGGAA c.1200
Q N S L H E K I G D E D G H | F P A H R E p.400
. . . . . . g.32978
GTGATGCTCTCCATGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGGCATCTGCGAAT c.1260
V M L S M L M H S S S K E V F Q A S A N p.420
. . | 12 . . . g.37269
GCATTGTCAACTCTCTTAGAACAAAATG | TTAATTTCAGAAAAATACTGTTATCAAAAGGA c.1320
A L S T L L E Q N V | N F R K I L L S K G p.440
. . . . . . g.37329
ATACACCTGAATGTTTTGGAGTTAATGCAGAAGCATATACATTCTCCTGAAGTGGCTGAA c.1380
I H L N V L E L M Q K H I H S P E V A E p.460
. . . | 13 . . g.39491
AGTGGCTGTAAAATGCTAAATCATCTTTTTGAAGGAAG | CAACACTTCCCTGGATATAATG c.1440
S G C K M L N H L F E G S | N T S L D I M p.480
. . . . . . g.39551
GCAGCAGTGGTCCCCAAAATACTAACAGTTATGAAACGTCATGAGACATCATTACCAGTG c.1500
A A V V P K I L T V M K R H E T S L P V p.500
. . . . | 14 . . g.43795
CAGCTGGAGGCGCTTCGAGCTATTTTACATTTTATAGTGCCTG | GCATGCCAGAAGAATCC c.1560
Q L E A L R A I L H F I V P G | M P E E S p.520
. . . . . . g.43855
AGGGAGGATACAGAATTTCATCATAAGCTAAATATGGTTAAAAAACAGTGTTTCAAGAAT c.1620
R E D T E F H H K L N M V K K Q C F K N p.540
. . . | 15 . . . g.54596
GATATTCACAAACTGGTCCTAGCAGCTTTGAACAGG | TTCATTGGAAATCCTGGGATTCAG c.1680
D I H K L V L A A L N R | F I G N P G I Q p.560
. . . . . . g.54656
AAATGTGGATTAAAAGTAATTTCTTCTATTGTACATTTTCCTGATGCATTAGAGATGTTA c.1740
K C G L K V I S S I V H F P D A L E M L p.580
. . . . . . g.54716
TCCCTGGAAGGTGCTATGGATTCAGTGCTTCACACACTGCAGATGTATCCAGATGACCAA c.1800
S L E G A M D S V L H T L Q M Y P D D Q p.600
| 16 . . . . . . g.54902
G | AAATTCAGTGTCTGGGTTTAAGTCTTATAGGATACTTGATTACAAAGAAGAATGTGTTC c.1860
E | I Q C L G L S L I G Y L I T K K N V F p.620
. . . . . . g.54962
ATAGGAACTGGACATCTGCTGGCAAAAATTCTGGTTTCCAGCTTATACCGATTTAAGGAT c.1920
I G T G H L L A K I L V S S L Y R F K D p.640
. . | 17 . . . . g.57916
GTTGCTGAAATACAGACTAAA | GGATTTCAGACAATCTTAGCAATCCTCAAATTGTCAGCA c.1980
V A E I Q T K | G F Q T I L A I L K L S A p.660
. . . . . . g.57976
TCTTTTTCTAAGCTGCTGGTGCATCATTCATTTGACTTAGTAATATTCCATCAAATGTCT c.2040
S F S K L L V H H S F D L V I F H Q M S p.680
. . . | 18 . . . g.58110
TCCAATATCATGGAACAAAAGGATCAACAG | TTTCTAAACCTCTGTTGCAAGTGTTTTGCA c.2100
S N I M E Q K D Q Q | F L N L C C K C F A p.700
. . . . . . g.58170
AAAGTAGCTATGGATGATTACTTAAAAAATGTGATGCTAGAGAGAGCGTGTGATCAGAAT c.2160
K V A M D D Y L K N V M L E R A C D Q N p.720
. . . . . . g.58230
AACAGCATCATGGTTGAATGCTTGCTTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAG c.2220
N S I M V E C L L L L G A D A N Q A K E p.740
. . | 19 . . . . g.63903
GGATCTTCTTTAATTTGTCAG | GTATGTGAGAAAGAGAGCAGTCCCAAATTGGTGGAACTC c.2280
G S S L I C Q | V C E K E S S P K L V E L p.760
. . . . . . g.63963
TTACTGAATAGTGGATCTCGTGAACAAGATGTACGAAAAGCGTTGACGATAAGCATTGGG c.2340
L L N S G S R E Q D V R K A L T I S I G p.780
. . . . . . g.64023
AAAGGTGACAGCCAGATCATCAGCTTGCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAAC c.2400
K G D S Q I I S L L L R R L A L D V A N p.800
. . . . . . g.64083
AATAGCATTTGCCTTGGAGGATTTTGTATAGGAAAAGTTGAACCTTCTTGGCTTGGTCCT c.2460
N S I C L G G F C I G K V E P S W L G P p.820
. . . . | 20 . . g.67360
TTATTTCCAGATAAGACTTCTAATTTAAGGAAACAAACAA | ATATAGCATCTACACTAGCA c.2520
L F P D K T S N L R K Q T N | I A S T L A p.840
. . . . . . g.67420
AGAATGGTGATCAGATATCAGATGAAAAGTGCTGTGGAAGAAGGAACAGCCTCAGGCAGC c.2580
R M V I R Y Q M K S A V E E G T A S G S p.860
. . . . . . g.67480
GATGGAAATTTTTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGAC c.2640
D G N F S E D V L S K F D E W T F I P D p.880
. . . . | 21 . g.73545
TCTTCTATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGATAGTGAAG | GAAGTGAAGGC c.2700
S S M D S V F A Q S D D L D S E G | S E G p.900
. . . . . . g.73605
TCATTTCTTGTGAAAAAGAAATCTAATTCAATTAGTGTAGGAGAATTTTACCGAGATGCC c.2760
S F L V K K K S N S I S V G E F Y R D A p.920
. . . . | 22 . g.74846
GTATTACAGCGTTGCTCACCAAATTTGCAAAGACATTCCAATTCCTTG | GGGCCCATTTTT c.2820
V L Q R C S P N L Q R H S N S L | G P I F p.940
. . . . . | 23 g.75418
GATCATGAAGATTTACTGAAGCGAAAAAGAAAAATATTATCTTCAGATGATTCACTCA | GG c.2880
D H E D L L K R K R K I L S S D D S L R | p.960
. . . . . . g.75478
TCATCAAAACTTCAATCCCATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTTCTGAG c.2940
S S K L Q S H M R H S D S I S S L A S E p.980
. . . . . . g.75538
AGAGAATATATTACATCACTAGACCTTTCAGCAAATGAACTAAGAGATATTGATGCCCTA c.3000
R E Y I T S L D L S A N E L R D I D A L p.1000
. . . . . . g.75598
AGCCAGAAATGCTGTATAAGTGTTCATTTGGAGCATCTTGAAAAGCTGGAGCTTCACCAG c.3060
S Q K C C I S V H L E H L E K L E L H Q p.1020
. . . | 24 . . . g.78256
AATGCACTCACGAGCTTTCCACAACAGCTATGTGAA | ACTCTGAAGAGTTTGACACATTTG c.3120
N A L T S F P Q Q L C E | T L K S L T H L p.1040
. . . . . . g.78316
GACTTGCACAGTAATAAATTTACATCATTTCCTTCTTATTTGTTGAAAATGAGTTGTATT c.3180
D L H S N K F T S F P S Y L L K M S C I p.1060
. . . . . . g.78376
GCTAATCTTGATGTCTCTCGAAATGACATTGGACCCTCAGTGGTTTTAGATCCTACAGTG c.3240
A N L D V S R N D I G P S V V L D P T V p.1080
. . . . . . g.78436
AAATGTCCAACTCTGAAACAGTTTAACCTGTCATATAACCAGCTGTCTTTTGTACCTGAG c.3300
K C P T L K Q F N L S Y N Q L S F V P E p.1100
. . . . | 25. . g.79111
AACCTCACTGATGTGGTAGAGAAACTGGAGCAGCTCATTTTAGAAGG | AAATAAAATATCA c.3360
N L T D V V E K L E Q L I L E G | N K I S p.1120
. . . . . . g.79171
GGGATATGCTCCCCCTTGAGACTGAAGGAACTGAAGATTTTAAACCTTAGTAAGAACCAC c.3420
G I C S P L R L K E L K I L N L S K N H p.1140
. . . . . . g.79231
ATTTCATCCCTATCAGAGAACTTTCTTGAGGCTTGTCCTAAAGTGGAGAGTTTCAGTGCC c.3480
I S S L S E N F L E A C P K V E S F S A p.1160
. | 26 . . . . . g.82822
AGAATGAATTTTCTTG | CTGCTATGCCTTTCTTGCCTCCTTCTATGACAATCCTAAAATTA c.3540
R M N F L A | A M P F L P P S M T I L K L p.1180
. . . . . | 27 . g.83947
TCTCAGAACAAATTTTCCTGTATTCCAGAAGCAATTTTAAATCTTCCACA | CTTGCGGTCT c.3600
S Q N K F S C I P E A I L N L P H | L R S p.1200
. . . . . . g.84007
TTAGATATGAGCAGCAATGATATTCAGTACCTACCAGGTCCCGCACACTGGAAATCTTTG c.3660
L D M S S N D I Q Y L P G P A H W K S L p.1220
. . . . . . g.84067
AACTTAAGGGAACTCTTATTTAGCCATAATCAGATCAGCATCTTGGACTTGAGTGAAAAA c.3720
N L R E L L F S H N Q I S I L D L S E K p.1240
. . . . . | 28. g.85777
GCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTCTCACAATAAACTGAAAGAG | ATT c.3780
A Y L W S R V E K L H L S H N K L K E | I p.1260
. . . . . . g.85837
CCTCCTGAGATTGGCTGTCTTGAAAATCTGACATCTCTGGATGTCAGTTACAACTTGGAA c.3840
P P E I G C L E N L T S L D V S Y N L E p.1280
. . . . . . g.85897
CTAAGATCCTTTCCCAATGAAATGGGGAAATTAAGCAAAATATGGGATCTTCCTTTGGAT c.3900
L R S F P N E M G K L S K I W D L P L D p.1300
. . . . . | 29 g.88457
GAACTGCATCTTAACTTTGATTTTAAACATATAGGATGTAAAGCCAAAGACATCATAAG | G c.3960
E L H L N F D F K H I G C K A K D I I R | p.1320
. . . . . . g.88517
TTTCTTCAACAGCGATTAAAAAAGGCTGTGCCTTATAACCGAATGAAACTTATGATTGTG c.4020
F L Q Q R L K K A V P Y N R M K L M I V p.1340
. . . . . . g.88577
GGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAATGAAAACCAAGAAATCA c.4080
G N T G S G K T T L L Q Q L M K T K K S p.1360
. . . . . . g.88637
GATCTTGGAATGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACTGGCCTATCCAAATA c.4140
D L G M Q S A T V G I D V K D W P I Q I p.1380
. . . . | 30 . g.89106
AGAGACAAAAGAAAGAGAGATCTCGTCCTAAATGTGTGGGATTTTGCAG | GTCGTGAGGAA c.4200
R D K R K R D L V L N V W D F A G | R E E p.1400
. . . . . . g.89166
TTCTATAGTACTCATCCCCATTTTATGACGCAGCGAGCATTGTACCTTGCTGTCTATGAC c.4260
F Y S T H P H F M T Q R A L Y L A V Y D p.1420
. . . . . | 31. g.90423
CTCAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAAG | GCT c.4320
L S K G Q A E V D A M K P W L F N I K | A p.1440
. . . . . . g.90483
CGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAG c.4380
R A S S S P V I L V G T H L D V S D E K p.1460
. . . . . . g.90543
CAACGCAAAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGAATAAGCGAGGGTTCCCT c.4440
Q R K A C M S K I T K E L L N K R G F P p.1480
. . . . . . g.90603
GCCATACGAGATTACCACTTTGTGAATGCCACCGAGGAATCTGATGCTTTGGCAAAACTT c.4500
A I R D Y H F V N A T E E S D A L A K L p.1500
. . . | 32 . . . g.93985
CGGAAAACCATCATAAACGAGAGCCTTAATTTCAAG | ATCCGAGATCAGCTTGTTGTTGGA c.4560
R K T I I N E S L N F K | I R D Q L V V G p.1520
. . . . . . g.94045
CAGCTGATTCCAGACTGCTATGTAGAACTTGAAAAAATCATTTTATCGGAGCGTAAAAAT c.4620
Q L I P D C Y V E L E K I I L S E R K N p.1540
. . . . . . g.94105
GTGCCAATTGAATTTCCCGTAATTGACCGGAAACGATTATTACAACTAGTGAGAGAAAAT c.4680
V P I E F P V I D R K R L L Q L V R E N p.1560
. . . . . | 33 g.95203
CAGCTGCAGTTAGATGAAAATGAGCTTCCTCACGCAGTTCACTTTCTAAATGAATCAG | GA c.4740
Q L Q L D E N E L P H A V H F L N E S G | p.1580
. . . . . . g.95263
GTCCTTCTTCATTTTCAAGACCCAGCACTGCAGTTAAGTGACTTGTACTTTGTGGAACCC c.4800
V L L H F Q D P A L Q L S D L Y F V E P p.1600
. . | 34. . . . g.100010
AAGTGGCTTTGTAAAATCATGGCACAG | ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAA c.4860
K W L C K I M A Q | I L T V K V E G C P K p.1620
. . . . . . g.100070
CACCCTAAGGGCATTATTTCGCGTAGAGATGTGGAAAAATTTCTTTCAAAAAAAAGGAAA c.4920
H P K G I I S R R D V E K F L S K K R K p.1640
. . . . . . g.100130
TTTCCAAAGAACTACATGTCACAGTATTTTAAGCTCCTAGAAAAATTCCAGATTGCTTTG c.4980
F P K N Y M S Q Y F K L L E K F Q I A L p.1660
. . . | 35 . . . g.101048
CCAATAGGAGAAGAATATTTGCTGGTTCCAAGCAG | TTTGTCTGACCACAGGCCTGTGATA c.5040
P I G E E Y L L V P S S | L S D H R P V I p.1680
. . . . . . g.101108
GAGCTTCCCCATTGTGAGAACTCTGAAATTATCATCCGACTATATGAAATGCCTTATTTT c.5100
E L P H C E N S E I I I R L Y E M P Y F p.1700
. . . . . . g.101168
CCAATGGGATTTTGGTCAAGATTAATCAATCGATTACTTGAGATTTCACCTTACATGCTT c.5160
P M G F W S R L I N R L L E I S P Y M L p.1720
. | 36 . . . . . g.102074
TCAGGGAGAG | AACGAGCACTTCGCCCAAACAGAATGTATTGGCGACAAGGCATTTACTTA c.5220
S G R E | R A L R P N R M Y W R Q G I Y L p.1740
. . . . . . g.102134
AATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAGTCTTAGACAATCATCCAGAG c.5280
N W S P E A Y C L V G S E V L D N H P E p.1760
. . . | 37. . . g.102331
AGTTTCTTAAAAATTACAGTTCCTTCTTGTAGAAAAG | GCTGTATTCTTTTGGGCCAAGTT c.5340
S F L K I T V P S C R K G | C I L L G Q V p.1780
. . . . . . g.102391
GTGGACCACATTGATTCTCTCATGGAAGAATGGTTTCCTGGGTTGCTGGAGATTGATATT c.5400
V D H I D S L M E E W F P G L L E I D I p.1800
. . . . . . g.102451
TGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTATATAGTTTTAATGATGGTGAA c.5460
C G E G E T L L K K W A L Y S F N D G E p.1820
. . . . | 38 . g.103160
GAACATCAAAAAATCTTACTTGATGACTTGATGAAGAAAGCAGAGGAAG | GAGATCTCTTA c.5520
E H Q K I L L D D L M K K A E E G | D L L p.1840
. . . . . . g.103220
GTAAATCCAGATCAACCAAGGCTCACCATTCCAATATCTCAGATTGCCCCTGACTTGATT c.5580
V N P D Q P R L T I P I S Q I A P D L I p.1860
. . . . . . g.103280
TTGGCTGACCTGCCTAGAAATATTATGTTGAATAATGATGAGTTGGAATTTGAACAAGCT c.5640
L A D L P R N I M L N N D E L E F E Q A p.1880
. | 39 . . . . . g.108393
CCAGAGTTTCTCCTAG | GTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGA c.5700
P E F L L G | D G S F G S V Y R A A Y E G p.1900
. . . . . | 40. g.114959
GAAGAAGTGGCTGTGAAGATTTTTAATAAACATACATCACTCAGGCTGTTAAGACAA | GAG c.5760
E E V A V K I F N K H T S L R L L R Q | E p.1920
. . . . . . g.115019
CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATT c.5820
L V V L C H L H H P S L I S L L A A G I p.1940
. . . . . . g.115079
CGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCTTCAG c.5880
R P R M L V M E L A S K G S L D R L L Q p.1960
. . . . . . g.115139
CAGGACAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGAT c.5940
Q D K A S L T R T L Q H R I A L H V A D p.1980
| 41 . . . . . g.120335
GGTTTGAG | ATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCACAATGTG c.6000
G L R | Y L H S A M I I Y R D L K P H N V p.2000
. . . . . . g.120395
CTGCTTTTCACACTGTATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATT c.6060
L L F T L Y P N A A I I A K I A D Y G I p.2020
. . . . | 42 . g.126753
GCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAG | GGTTTCGTGCA c.6120
A Q Y C C R M G I K T S E G T P G | F R A p.2040
. . . . . . g.126813
CCTGAAGTTGCCAGAGGAAATGTCATTTATAACCAACAGGCTGATGTTTATTCATTTGGT c.6180
P E V A R G N V I Y N Q Q A D V Y S F G p.2060
. . . . . . g.126873
TTACTACTCTATGACATTTTGACAACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCA c.6240
L L L Y D I L T T G G R I V E G L K F P p.2080
. . . . | 43 . . g.128418
AATGAGTTTGATGAATTAGAAATACAAGGAAAATTACCTG | ATCCAGTTAAAGAATATGGT c.6300
N E F D E L E I Q G K L P D | P V K E Y G p.2100
. . . . . . g.128478
TGTGCCCCATGGCCTATGGTTGAGAAATTAATTAAACAGTGTTTGAAAGAAAATCCTCAA c.6360
C A P W P M V E K L I K Q C L K E N P Q p.2120
. . | 44 . . . . g.131567
GAAAGGCCTACTTCTGCCCAG | GTCTTTGACATTTTGAATTCAGCTGAATTAGTCTGTCTG c.6420
E R P T S A Q | V F D I L N S A E L V C L p.2140
. . . . . . g.131627
ACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTACACATCAC c.6480
T R R I L L P K N V I V E C M V A T H H p.2160
. . . . . . g.131687
AACAGCAGGAATGCAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCA c.6540
N S R N A S I W L G C G H T D R G Q L S p.2180
. . . | 45 . . . g.134312
TTTCTTGACTTAAATACTGAAGGATACACTTCTGAG | GAAGTTGCTGATAGTAGAATATTG c.6600
F L D L N T E G Y T S E | E V A D S R I L p.2200
. . . . . . g.134372
TGCTTAGCCTTGGTGCATCTTCCTGTTGAAAAGGAAAGCTGGATTGTGTCTGGGACACAG c.6660
C L A L V H L P V E K E S W I V S G T Q p.2220
. . . . . . g.134432
TCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAGACATACCCTAGAAAAG c.6720
S G T L L V I N T E D G K K R H T L E K p.2240
. . . . . | 46 . g.136114
ATGACTGATTCTGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCAAAG | CAAACAAAAA c.6780
M T D S V T C L Y C N S F S K Q S | K Q K p.2260
. . . . . . g.136174
AATTTTCTTTTGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGACTGTT c.6840
N F L L V G T A D G K L A I F E D K T V p.2280
| 47 . . . . . . g.139306
AAG | CTTAAAGGAGCTGCTCCTTTGAAGATACTAAATATAGGAAATGTCAGTACTCCATTG c.6900
K | L K G A A P L K I L N I G N V S T P L p.2300
. . . . . . g.139366
ATGTGTTTGAGTGAATCCACAAATTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGC c.6960
M C L S E S T N S T E R N V M W G G C G p.2320
. . . . . . g.139426
ACAAAGATTTTCTCCTTTTCTAATGATTTCACCATTCAGAAACTCATTGAGACAAGAACA c.7020
T K I F S F S N D F T I Q K L I E T R T p.2340
| 48 . . . . . g.143443
AGCCAACT | GTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC c.7080
S Q L | F S Y A A F S D S N I I T V V V D p.2360
. . . . . . g.143503
ACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTGTGGGATAAGAAAACT c.7140
T A L Y I A K Q N S P V V E V W D K K T p.2380
. . . . | 49 . . g.144850
GAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAG | GGAGGTAATGGTAAAAGAA c.7200
E K L C G L I D C V H F L R | E V M V K E p.2400
. . . . . . g.144910
AACAAGGAATCAAAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAG c.7260
N K E S K H K M S Y S G R V K T L C L Q p.2420
. . . . . . g.144970
AAGAACACTGCTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCA c.7320
K N T A L W I G T G G G H I L L L D L S p.2440
. . . . . . g.145030
ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATGATGACA c.7380
T R R L I R V I Y N F C N S V R V M M T p.2460
. | 50 . . . . . g.147045
GCACAGCTAG | GAAGCCTTAAAAATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACT c.7440
A Q L G | S L K N V M L V L G Y N R K N T p.2480
. . | 51 . . . . g.147671
GAAGGTACACAAAAGCAGAAAG | AGATACAATCTTGCTTGACCGTTTGGGACATCAATCTT c.7500
E G T Q K Q K E | I Q S C L T V W D I N L p.2500
. . . . . . g.147731
CCACATGAAGTGCAAAATTTAGAAAAACACATTGAAGTGAGAAAAGAATTAGCTGAAAAA c.7560
P H E V Q N L E K H I E V R K E L A E K p.2520
. . g.147755
ATGAGACGAACATCTGTTGAGTAA c.7584
M R R T S V E X p.2527
. . . . . . g.147815
gagagaaataggaattgtctttggataggaaaattattctctcctcttgtaaatatttat c.*60
. . . . . . g.147875
tttaaaaatgttcacatggaaagggtactcacattttttgaaatagctcgtgtgtatgaa c.*120
. . . . . . g.147935
ggaatgttattatttttaatttaaatatatgtaaaaatacttaccagtaaatgtgtattt c.*180
. . . . . . g.147995
taaagaactatttaaaacacaatgttatatttcttataaataccagttactttcgttcat c.*240
. . . . . . g.148055
taattaatgaaaataaatctgtgaagtacctaatttaagtactcatactaaaatttataa c.*300
. . . . . . g.148115
ggccgataattttttgttttcttgtctgtaatggaggtaaactttattttaaattctgtg c.*360
. . . . . . g.148175
cttaagacaggactattgcttgtcgatttttctagaaatctgcacggtataatgaaaata c.*420
. . . . . . g.148235
ttaagacagtttcccatgtaatgtattccttcttagattgcatcgaaatgcactatcata c.*480
. . . . . . g.148295
tatgcttgtaaatattcaaatgaatttgcactaataaagtcctttgttggtatgtgaatt c.*540
. . . . . . g.148355
ctctttgttgctgttgcaaacagtgcatcttacacaacttcactcaattcaaaagaaaac c.*600
. . . . . . g.148415
tccattaaaagtactaatgaaaaaacatgacatactgtcaaagtcctcatatctaggaaa c.*660
. . . . . . g.148475
gacacagaaactctctttgtcacagaaactctctgtgtctttcctagacataatagagtt c.*720
. . . . . . g.148535
gtttttcaactctatgtttgaatgtggataccctgaattttgtataattagtgtaaatac c.*780
. . . . . . g.148595
agtgttcagtccttcaagtgatatttttatttttttattcataccactagctacttgttt c.*840
. . . . . . g.148655
tctaatctgcttcattctaatgcttatattcatcttttccctaaatttgtgatgctgcag c.*900
. . . . . . g.148715
atcctacatcattcagatagaaacctttttttttttcagaattatagaattccacagctc c.*960
. . . . . . g.148775
ctaccaagaccatgaggataaatatctaacacttttcagttgctgaaggagaaaggagct c.*1020
. . . . . . g.148835
ttagttatgatggataaaaatatctgccaccctaggcttccaaattatacttaaattgtt c.*1080
. . . . . . g.148895
tacatagcttaccacaataggagtatcagggccaaatacctatgtaataatttgaggtca c.*1140
. . . . . . g.148955
tttctgctttaggaaaagtactttcggtaaattctttggccctgaccagtattcattatt c.*1200
. . . . . . g.149015
tcagataattccctgtgataggacaactagtacatttaatattctcagaacttatggcat c.*1260
. . . . . . g.149075
tttactatgtgaaaactttaaatttatttatattaagggtaatcaaattcttaaagatga c.*1320
. . . . . . g.149135
aagattttctgtattttaaaggaagctatgctttaacttgttatgtaattaacaaaaaaa c.*1380
. . . . . . g.149195
tcatatataatagagctctttgttccagtgttatctctttcattgttactttgtatttgc c.*1440
. . . . . . g.149255
aattttttttaccaaagacaaattaaaaaaatgaataccatatttaaatggaataataaa c.*1500
. . g.149275
ggttttttaaaaactttaaa c.*1520
(downstream sequence)
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