(used for variant description)
(last modified April 7, 2023)
This file was created to facilitate the description of sequence variants on transcript NM_020932.2 in the MAGEE1 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000023.10, covering MAGEE1 transcript NM_020932.2.
(upstream sequence)
. . . g.5038
agagccagtctgcgcctgcgcggactgcggcagagggc c.-241
. . . . . . g.5098
ggggtgtgagaagcagagtacagtgagactagcattcactgctggccagtgcctgccttt c.-181
. . . . . . g.5158
ttcaccacctctaatttcagcttcagcagttgcttggaactttggttctggcagcagcag c.-121
. . . . . . g.5218
caacatcattaccgctagcggcagttttgtgccgaggcacctacacacctcccgtcctct c.-61
. . . . . . g.5278
ctgccagatcgcgggcctgtcggtgtctgctcctacacgccaacgccggtgggcaggacc c.-1
. . . . . . g.5338
ATGTCTCTGGTAAGCCAGAATTCGCGCCGCCGCCGCCGCCGCGTTGCAAAGGCTACTGCG c.60
M S L V S Q N S R R R R R R V A K A T A p.20
. . . . . . g.5398
CACAACAGCAGCTGGGGCGAAATGCAGGCCCCTAATGCCCCCGGTCTCCCCGCTGATGTG c.120
H N S S W G E M Q A P N A P G L P A D V p.40
. . . . . . g.5458
CCAGGCTCAGACGTCCCCCAGGGTCCCAGCGATTCCCAGATCCTCCAGGGCCTCTGCGCC c.180
P G S D V P Q G P S D S Q I L Q G L C A p.60
. . . . . . g.5518
TCTGAGGGCCCAAGCACCTCCGTTCTGCCCACCTCCGCTGAGGGCCCAAGCACCTTTGTG c.240
S E G P S T S V L P T S A E G P S T F V p.80
. . . . . . g.5578
CCGCCCACCATCTCTGAGGCCTCAAGCGCCTCCGGGCAGCCCACCATCTCTGAGGGACCT c.300
P P T I S E A S S A S G Q P T I S E G P p.100
. . . . . . g.5638
GGCACCTCCGTGCTGCCCACCCCCAGTGAGGGCCTAAGCACCTCCGGGCCTCCCACCATC c.360
G T S V L P T P S E G L S T S G P P T I p.120
. . . . . . g.5698
TCTAAGGGGCTGTGCACCTCTGTGACGCTTGCCGCCTCTGAGGGCCGGAACACCTCCAGG c.420
S K G L C T S V T L A A S E G R N T S R p.140
. . . . . . g.5758
CCGCCCACTTCCTCTGAGGAACCTAGCACCTCCGTGCCGCCCACCGCCTCTGAGGTACCG c.480
P P T S S E E P S T S V P P T A S E V P p.160
. . . . . . g.5818
AGCACCTCCCTGCCGCCCACCCCTGGTGAGGGAACGAGCACCTCCGTGCCGCCCACAGCC c.540
S T S L P P T P G E G T S T S V P P T A p.180
. . . . . . g.5878
TATGAGGGACCAAGCACCTCCGTGGTGCCCACCCCTGATGAGGGACCAAGCACCTCCGTG c.600
Y E G P S T S V V P T P D E G P S T S V p.200
. . . . . . g.5938
CTGCCTACACCTGGTGAGGGACCAGGCACCTCCGTGCCGCTCGCCGCCACTGAGGGCCTG c.660
L P T P G E G P G T S V P L A A T E G L p.220
. . . . . . g.5998
AGCACCTCCGTGCAGGCCACTCCTGATGAGGGACCGAGCACCTCCGTGCCGCCCACCGCC c.720
S T S V Q A T P D E G P S T S V P P T A p.240
. . . . . . g.6058
ACTGAGGGCCTAAGCACCCCCGTGCCACCCACCCGTGATGAGGGACCGAGCACCTCCGTG c.780
T E G L S T P V P P T R D E G P S T S V p.260
. . . . . . g.6118
CCGGCCACTCCTGGTGAGGGACCGAGCACCTCCGTGCTGCCCGCCGCCTCTGACGGACAA c.840
P A T P G E G P S T S V L P A A S D G Q p.280
. . . . . . g.6178
AGCATCTCCTTGGTGCCCACCCGCGGTAAGGGATCAAGCACCTCCGTGCCCCCCACCGCC c.900
S I S L V P T R G K G S S T S V P P T A p.300
. . . . . . g.6238
ACCGAGGGCCTGAGCACCTCCGTGCAGCCCACTGCTGGTGAGGGATCGAGCACCTCCGTG c.960
T E G L S T S V Q P T A G E G S S T S V p.320
. . . . . . g.6298
CCGCCCACCCCTGGTGGGGGACTGAGCACCTCCGTGCCGCCCACCGCCACTGAGGAGTTG c.1020
P P T P G G G L S T S V P P T A T E E L p.340
. . . . . . g.6358
AGCACCTCCGTGCCGCCCACTCCCGGTGAGGGACCAAGCACTTCCGTACTGCCAATCCCC c.1080
S T S V P P T P G E G P S T S V L P I P p.360
. . . . . . g.6418
GGTGAGGGACTGAGCACCTCTGTGCCGCCCACCGCCTCTGATGGATCGGACACCTCCGTG c.1140
G E G L S T S V P P T A S D G S D T S V p.380
. . . . . . g.6478
CCGCCCACTCCTGGTGAGGGCGCAAGCACCTTAGTGCAGCCCACCGCCCCTGACGGACCG c.1200
P P T P G E G A S T L V Q P T A P D G P p.400
. . . . . . g.6538
GGAAGCTCCGTGCTGCCTAACCCTGGTGAGGGCCCGAGCACATTGTTTAGCTCTAGTGCT c.1260
G S S V L P N P G E G P S T L F S S S A p.420
. . . . . . g.6598
TCTGTGGACCGGAACCCCTCCAAGTGTTCCCTTGTTTTGCCAAGCCCTAGGGTAACCAAG c.1320
S V D R N P S K C S L V L P S P R V T K p.440
. . . . . . g.6658
GCCTCCGTGGACTCAGATTCTGAGGGTCCTAAGGGTGCAGAAGGCCCTATAGAATTCGAG c.1380
A S V D S D S E G P K G A E G P I E F E p.460
. . . . . . g.6718
GTCCTGAGAGACTGTGAGAGCCCCAACTCCATTAGTATTATGGGCCTCAATACTTCCCGG c.1440
V L R D C E S P N S I S I M G L N T S R p.480
. . . . . . g.6778
GTTGCAATTACCCTGAAGCCCCAAGACCCTATGGAACAGAACGTAGCTGAGCTGTTGCAG c.1500
V A I T L K P Q D P M E Q N V A E L L Q p.500
. . . . . . g.6838
TTCCTGCTGGTGAAGGATCAGAGCAAGTACCCTATCCGGGAGTCTGAAATGCGGGAATAT c.1560
F L L V K D Q S K Y P I R E S E M R E Y p.520
. . . . . . g.6898
ATTGTTAAAGAATATCGCAACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCCACCTG c.1620
I V K E Y R N Q F P E I L R R A A A H L p.540
. . . . . . g.6958
GAGTGCATTTTTAGGTTTGAATTGAGAGAACTTGACCCTGAGGCACACACCTACATTCTG c.1680
E C I F R F E L R E L D P E A H T Y I L p.560
. . . . . . g.7018
TTAAACAAACTGGGACCTGTGCCCTTTGAAGGGTTAGAAGAGAGCCCAAATGGGCCAAAG c.1740
L N K L G P V P F E G L E E S P N G P K p.580
. . . . . . g.7078
ATGGGCCTCCTGATGATGATTCTAGGCCAAATATTCCTGAATGGCAACCAAGCCAAGGAG c.1800
M G L L M M I L G Q I F L N G N Q A K E p.600
. . . . . . g.7138
GCTGAGATTTGGGAAATGCTCTGGAGGATGGGGGTGCAGCGGGAAAGGAGGCTTTCCATT c.1860
A E I W E M L W R M G V Q R E R R L S I p.620
. . . . . . g.7198
TTTGGGAACCCAAAGAGACTTCTGTCTGTGGAGTTTGTATGGCAGCGTTACTTAGACTAC c.1920
F G N P K R L L S V E F V W Q R Y L D Y p.640
. . . . . . g.7258
AGGCCAGTAACTGACTGTAAACCAGTGGAGTATGAGTTTTTCTGGGGCCCAAGATCCCAC c.1980
R P V T D C K P V E Y E F F W G P R S H p.660
. . . . . . g.7318
CTAGAAACCACCAAGATGAAAATTCTGAAGTTCATGGCGAAAATATATAACAAAGATCCT c.2040
L E T T K M K I L K F M A K I Y N K D P p.680
. . . . . . g.7378
ATGGATTGGCCAGAGAAATACAACGAAGCTCTGGAAGAAGATGCTGCCAGAGCCTTTGCT c.2100
M D W P E K Y N E A L E E D A A R A F A p.700
. . . . . . g.7438
GAGGGTTGGCAGGCTCTCCCTCACTTTAGGAGGCCCTTTTTTGAGGAAGCTGCTGCAGAG c.2160
E G W Q A L P H F R R P F F E E A A A E p.720
. . . . . . g.7498
GTACCATCCCCTGATTCAGAGGTTTCCAGCTATTCCTCAAAATATGCCCCACATTCATGG c.2220
V P S P D S E V S S Y S S K Y A P H S W p.740
. . . . . . g.7558
CCTGAGTCAAGATTGGAGAGCAAGGCAAGGAAGCTGGTGCAGTTATTTCTGCTTATGGAT c.2280
P E S R L E S K A R K L V Q L F L L M D p.760
. . . . . . g.7618
TCAACTAAGCTGCCTATACCAAAGAAAGGAATTCTGTACTACATTGGCCGAGAGTGCAGC c.2340
S T K L P I P K K G I L Y Y I G R E C S p.780
. . . . . . g.7678
AAAGTGTTCCCTGACCTCCTGAATCGTGCTGCCCGCACCCTGAACCATGTCTATGGGACA c.2400
K V F P D L L N R A A R T L N H V Y G T p.800
. . . . . . g.7738
GAACTAGTGGTACTTGATCCCAGGAATCACTCCTATACTCTGTACAACCGAAGGGAGATG c.2460
E L V V L D P R N H S Y T L Y N R R E M p.820
. . . . . . g.7798
GAAGAAACTGAGGAGATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAG c.2520
E E T E E I V D S P N R P G N N F L M Q p.840
. . . . . . g.7858
GTCCTAAGCTTCATCTTTATTATGGGCAACCATGCCAGGGAGTCTGCAGTCTGGGCCTTT c.2580
V L S F I F I M G N H A R E S A V W A F p.860
. . . . . . g.7918
CTGCGGGGCTTAGGGGTTCAAGCTGGGAGAAAGCATGTGATTACCTGCAGATACTTGAGT c.2640
L R G L G V Q A G R K H V I T C R Y L S p.880
. . . . . . g.7978
CAGCGCTATATAGACAGTTTACGGGTTCCTGACAGTGATCCAGTGCAATATGAGTTTGTA c.2700
Q R Y I D S L R V P D S D P V Q Y E F V p.900
. . . . . . g.8038
TGGGGTCCTAGAGCCCGTTTGGAAACCTCTAAGATGAAAGCCTTGCGATATGTGGCCAGA c.2760
W G P R A R L E T S K M K A L R Y V A R p.920
. . . . . . g.8098
ATCCACAGAAAGGAACCACAGGACTGGCCACAGCAGTACAGGGAGGCAATGGAAGATGAG c.2820
I H R K E P Q D W P Q Q Y R E A M E D E p.940
. . . . . g.8152
GCCAATAGAGCTGATGTTGGGCACAGGCAAATCTTTGTTCACAACTTCAGGTAG c.2874
A N R A D V G H R Q I F V H N F R X p.957
. . . . . . g.8212
aggaatgcatggcagtcagaggggccttgcaaggaggggcctttgagcctcagttctcat c.*60
. . . . . . g.8272
gtattggggggtgggggtgggtacatattgtatttggtatttgtgttccagttatattta c.*120
. . . . . . g.8332
tgtcttttcatatttagttctggtgtggtgtctggaaatgtttcaactgttttaatatat c.*180
. . . . . . g.8392
tgtctgattgggtaaatgtgattgaccacttgctgtctctgttgtattttggtatgagtt c.*240
. . . . . . g.8452
ttgatagctctataaaatgttttggaaatctttccatcttgttgcattatctagaaaaga c.*300
. . . . . . g.8512
atatagcatatagctatagatataggcttttccttgaaagcttgaaaaaaattcgccagt c.*360
. . . . . . g.8572
aaaataatctagcttaaagtgataaactaacaaacaaatataacaacaactgaaaaggca c.*420
. . . . . . g.8632
ctctaaattgtggctggcttccctttctgtctgctattgtatgaagaatactgatgttta c.*480
. . . . . . g.8692
cctgtatttgctttgctgtactaaaatgtaatgaaaaataaaagattaataaatgaaaca c.*540
g.8701
taatgctaa c.*549
(downstream sequence)
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