matrilin 3 (MATN3) - 6098 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5346
gtacaggcgggcggcgggagggacgcgtgagcatcgaacgaggagaagcccagggcatcc  c.223+60

         .         .         .         .         .         .  g.5406
accaagcgcgcttcatcccggcctcaggccgaccgtggtgcgggggaaagaggcccctcc  c.223+120

         .         .         .         .         .         .  g.5466
cggatgaatcctgtgggggaaactgaggtccagagaaggggagggagatgcccaatatca  c.223+180

         .         .         .         .         .         .  g.5526
ctcatgtgtccaggctagagatgtgggtctcctgaagctctcactcccctgtgattcggc  c.223+240

         .         .         .         .         .         .  g.5586
caggagcacagggcagctggggagcgcaggggctgctgcccagcggctgctgctaagctc  c.223+300

         .         .         .         .         .         .  g.5646
cgtcccagtcctgacctctccattcagtgagcaaacccttcctgagactctgctgttagt  c.223+360

         .         .         .         .         .         .  g.5706
tctcttggaatctctccatctccatccaatatcagggcgtgatctttcctcccctcccac  c.223+420

         .         .         .         .         .         .  g.5766
agtcctcaggctgcctcagactggaaggtaagggatgcgggtgtgagaccaggaggagat  c.223+480

         .         .         .         .         .         .  g.5826
ccgaggagccgtaggataccccaggatcaagacactctgggtctttggcgaacaattcta  c.223+540

         .         .         .         .         .         .  g.5886
tttctctttttggtcagcaattgattcctgaagcagagcaaagctcatagtgcagcgaag  c.223+600

         .         .         .         .         .         .  g.5946
cgggcaggtcgtctgacacagcccctgacagcacatgaagggaaactgaggcatatcaag  c.223+660

         .         .         .         .         .         .  g.6006
ttgaagggactctgtgaatcagtatcagaggccacaataaaattcagggctccgaaatcc  c.223+720

         .         .         .         .         .         .  g.6066
caagcaaggtctctttccactgccccagcctaccaacctcttaatatggtttacataaga  c.223+780

         .         .         .         .         .         .  g.6126
ttgtatcttcatttccaaaaagcgcagcttcagtcttgctaaaaagagtctgtgccaggc  c.223+840

         .         .         .         .         .         .  g.6186
catttctgggtatgcagtctcatttggccagccacgctgcatgcctcaggctgatttcaa  c.223+900

         .         .         .         .         .         .  g.6246
ttgtctatccccttctgcatctttctggataagctgagaaggagctcaagggactctttc  c.223+960

         .         .         .         .         .         .  g.6306
ctgactcaaatactcagtccccgtatttgaagtggcagatttgaaatggcaaaagcattg  c.223+1020

         .         .         .         .         .         .  g.6366
ctgctaaggcaggaggtaccggggtccacagggctagattcagctggtggctggttgctc  c.223+1080

         .         .         .         .         .         .  g.6426
caggccgggaattgagggaaagcctttcttctggaagttaatcttactctagtcctgacc  c.223+1140

         .         .         .         .         .         .  g.6486
tgcctccctctgggatgggactggaagaggaaggagagattcagcaccaggtggccatgt  c.223+1200

         .         .         .         .         .         .  g.6546
ccccctaagctttactggtctttcattacctagagtccgaacctgatcatgaatgataac  c.223+1260

         .         .         .         .         .         .  g.6606
ccattaataaatgcgagattccaccctgttccaaattatctccttttagcaaccagaaat  c.223+1320

         .         .         .         .         .         .  g.6666
tgctaagcttcgctatggatttttatttctagcaggactgtaaggactcagtggtattat  c.223+1380

         .         .         .         .         .         .  g.6726
gagtatgggaacattttaggagattcagattctttctttgttcttgggaatcaaattgct  c.223+1440

         .         .         .         .         .         .  g.6786
gctatttagtaaatgggagtgagattcaaaaacaactaatgattgatgcggagtaccagt  c.223+1500

         .         .         .         .         .         .  g.6846
caggaaggaaccagatgttcacagaattttctgccaccatggtcaagcctcaggtattag  c.223+1560

         .         .         .         .         .         .  g.6906
ttttctatggccactgtaacaaattactgtgaatttagtgccttaagacaacacacattt  c.223+1620

         .         .         .         .         .         .  g.6966
attacctgagagttctgtgggtcagaagtctgaccctggtctcactgggctaagatgaag  c.223+1680

         .         .         .         .         .         .  g.7026
gtgtcggcagggctgtgttccttttgggaggctctaggggagactgcatttcccttccct  c.223+1740

         .         .         .         .         .         .  g.7086
ttccaccgcatgaaggctgctgagttccttggcttatggcctttttcttccattttcaga  c.223+1800

         .         .         .         .         .         .  g.7146
gccagctaaagcaggttgaggccttctcccattgagttactcacatttctttcatctgcc  c.223+1860

         .         .         .         .         .         .  g.7206
tccctcttctactttataattacattgactcactgaataatccaggataacctcttgtgt  c.223+1920

         .         .         .         .         .         .  g.7266
agagctctttgacttaatcacacctgcaaagtctctgctctttgccacgtaaaagtaaca  c.223+1980

         .         .         .         .         .         .  g.7326
tgtctctggaattaggacgtggacgtctttggcgggggacattattctgcataccacacc  c.223+2040

         .         .         .         .         .         .  g.7386
ccgaatagaggattcggtgtgaataaccaagtggagaaggaaagaatcatgcacgtttag  c.223+2100

         .         .         .         .         .         .  g.7446
ttataagaacatagccatgatatttataaggacaccatttgggtgctggtgaaagcactg  c.223+2160

         .         .         .         .         .         .  g.7506
tcaattacagagttcatatcttcatgttacccccaccttttctttttctaattatacaaa  c.223+2220

         .         .         .         .         .         .  g.7566
aatactttgacccatctccaggaaagattttcaacataattcttcttcctagctctagat  c.223+2280

         .         .         .         .         .         .  g.7626
ctatgggactttccaggaatgaagtaaaattctggaggtttttttttttttttttttttt  c.223+2340

         .         .         .         .         .         .  g.7686
tagtatttgaagagatttattctgagacaaacatgagtgaccatggtctgtgacacagcc  c.223+2400

         .         .         .         .         .         .  g.7746
ctcaagaggtcctgagtacatgtgctcaagatggtcagggtgcagcttgtttttatacaa  c.223+2460

         .         .         .         .         .         .  g.7806
tttaaggaggtatgagacatcaatcaaatacatttaagaaatacattggtttggtcctaa  c.223+2520

         .         .         .         .         .         .  g.7866
aaggtgggacaactcaaagccggtggtggtgaggggcttccaggctataggtaagtttaa  c.223+2580

         .         .         .         .         .         .  g.7926
atattttctggttgataattggttgcatttgcctaaagacctgggatccatagaaaggaa  c.223+2640

         .         .         .         .         .         .  g.7986
atgttcaggttaagataaaagactgtaaagaccaatgttcttttgaagtcttatagtggc  c.223+2700

         .         .         .         .         .         .  g.8046
tacccttagagacaatagatgacaaatgtttcctattcagatctttttaaaaaattatta  c.223+2760

         .         .         .         .         .         .  g.8106
ttattttactttaagttctgggatacatgtgcagaatgtgcaggtttgttacatagggat  c.223+2820

         .         .         .         .         .         .  g.8166
acatgtgcgctggtggtttgctgcacccatcaacccatcatctaggttttaagccccaca  c.223+2880

         .         .         .         .         .         .  g.8226
tagattaggtatttgtcctaatgctctccctcctcttgccccccaccccctgacaggcgc  c.223+2940

         .         .         .         .         .         .  g.8286
tggtgtgtgatgttcccctccctatgtccatgagttctcattgttcaactcccacttatg  c.223+3000

         .         .         .         .           g.8335
agtgagaacatgtggtgtctggttttctgttcctgtgtcagtttgctga  c.223+3049

--------------------- middle of intron ---------------------
          g.8336               .         .         .         .           g.8384
          c.224-3049  gaatgacggcttccagcttcatccatgtccctgcaaaggacatggactc  c.224-3001

.         .         .         .         .         .           g.8444
attcttttttatggctgctggagttgttttttttttttttaaagaaagaaagaattttga  c.224-2941

.         .         .         .         .         .           g.8504
ttccttttttttttttttggcttttagagactgggtctcattctatcatccaggctggag  c.224-2881

.         .         .         .         .         .           g.8564
tgcagtggtgtgattgtggctcactgcagccttgactctctagctttaagcgatcctcct  c.224-2821

.         .         .         .         .         .           g.8624
gcctcagccccctaagcagctgggactacaggtgcctgccaccatgcctggctaattttt  c.224-2761

.         .         .         .         .         .           g.8684
aaactttttatagagatgaggtctccctatgttgcccaggctggtctagaactccggagc  c.224-2701

.         .         .         .         .         .           g.8744
tcaagtgatccttctccctcagcctctcgaagtgttgggattacaggcgtgagccactgc  c.224-2641

.         .         .         .         .         .           g.8804
gcctgggtttaattccttttgacttaactaaatgcatgacatacagcatatttcagggcg  c.224-2581

.         .         .         .         .         .           g.8864
gtgacttaaagtcaacaagcaggatgtttactgaatacatgagagaatgttgatttttgt  c.224-2521

.         .         .         .         .         .           g.8924
ggaggaaaatgttgcctcagagagaggtaactgggattcagtagcaagctcccagggact  c.224-2461

.         .         .         .         .         .           g.8984
gggagtcaggaaacctggagtccaatccatgctctaccactttctagttctcacacctcc  c.224-2401

.         .         .         .         .         .           g.9044
ttgaacctcaggtttctcacctgtaaaatgaatataaaaaccacctctgcacctccagcc  c.224-2341

.         .         .         .         .         .           g.9104
tcacaggttgatgtgttggtaccttgcgattcctaaagtgttactgaaaggaagattttc  c.224-2281

.         .         .         .         .         .           g.9164
tttttgttaattaaatacctccaagcagcaggctaaaaacaagaagataattttctgctt  c.224-2221

.         .         .         .         .         .           g.9224
ttaaaagaaaactagacagagacataaggtaggctgttccaggtaaggctttaatttttt  c.224-2161

.         .         .         .         .         .           g.9284
tctataaactgcttagtctaggcattaattttgaatcacctttttttcctactaagtatt  c.224-2101

.         .         .         .         .         .           g.9344
accttcctagagtagcatcaacttctgcctccttattaggaaaggaaagagccttgagtg  c.224-2041

.         .         .         .         .         .           g.9404
acacttcatgccccaggacctcatttccatttagggctgcatgcgtgtgttgggtgagaa  c.224-1981

.         .         .         .         .         .           g.9464
gggggaatgacttgaaaaagaagtttagggctgggcacagtggctcacacctataatccc  c.224-1921

.         .         .         .         .         .           g.9524
agcactctgggaggccaaggtgggaggatcacctgaggttgggagtttgagcccagcctg  c.224-1861

.         .         .         .         .         .           g.9584
gccaacatagtgaaaccccgtctctatgaaaaatacaaaaattagctgggtgtggtggcg  c.224-1801

.         .         .         .         .         .           g.9644
cacacctgtagtcccagctactcaggaggctgaggcaggagaactgcttgaacccaggag  c.224-1741

.         .         .         .         .         .           g.9704
gtggtggttgcagtgagccaagattgcaccaccgcactccagcctgggtgacagaatgag  c.224-1681

.         .         .         .         .         .           g.9764
actccgtctcaaaaaaaagaaaaagaagtttaataattggctttttttcttgtctcatcc  c.224-1621

.         .         .         .         .         .           g.9824
tgacttgtggatttgatttttgtatcgaggagagagggtgtgcaaacaggggttggggga  c.224-1561

.         .         .         .         .         .           g.9884
aacaggaaagaacaggaaagaatagatgaacactaaaatgtactgtgatactaaactgtt  c.224-1501

.         .         .         .         .         .           g.9944
aggtacttttgtgtagaaaagagataaattctttgaaggtgggaaatctggctatctggt  c.224-1441

.         .         .         .         .         .           g.10004
ttatatgcttttgtagctccagggcttcatacatgtaggccctcaaaaaatgtttttggt  c.224-1381

.         .         .         .         .         .           g.10064
gaatgaataagtcaaaagagagatgaccaagagagttagttggggcagtagggtagatac  c.224-1321

.         .         .         .         .         .           g.10124
cagatcacaatccctgcttcttacgagacatgctcatgaagctggaagctcactaaacag  c.224-1261

.         .         .         .         .         .           g.10184
atacaagattaagttggcatccctcattctactttttttttgagatgatgtcttgctctt  c.224-1201

.         .         .         .         .         .           g.10244
attgcccaggctggagtgcaatggcaggatctcagctcactgcaacctccacctcccggg  c.224-1141

.         .         .         .         .         .           g.10304
tttaagcgattctcctgcctcagcctcccgagtagctgggattacaggcacatgccacta  c.224-1081

.         .         .         .         .         .           g.10364
cgacccgctaatttttgtatttttagtagagacagggtttcaccaagttggccaggctgg  c.224-1021

.         .         .         .         .         .           g.10424
tctcaaactcctgacctcaggtgatcctcccgcctcggcctcccacagtgttgggattac  c.224-961

.         .         .         .         .         .           g.10484
caggcgtgagccaccgcgcccgggcccctctttctacttacttttttttttgttttgttt  c.224-901

.         .         .         .         .         .           g.10544
tttgagacggagtctcgctctgttgcccaggctggagtgcagtggcgtaatctcagctca  c.224-841

.         .         .         .         .         .           g.10604
ctgcaagctctgtctcccaggttcacgccattctcctgcctcagtctcccgagtagctgg  c.224-781

.         .         .         .         .         .           g.10664
gaatacaggcacccactaccacgcccggctaattttttgtatttttagtagagacggggt  c.224-721

.         .         .         .         .         .           g.10724
ttcaccgtgatggtcttgatctcctgacctcttgatttgcccgccttggcctcccaaagt  c.224-661

.         .         .         .         .         .           g.10784
gctgggattacaggcatgagccaccacgcctggctctactttaaattagttcagggctcc  c.224-601

.         .         .         .         .         .           g.10844
agtgagcccccaaattcactaaacaggaaagatggccagatggagggagaattcagggat  c.224-541

.         .         .         .         .         .           g.10904
actctggagcagttttcagccccttggaagtggagtaaaagaggggggccaccagaagag  c.224-481

.         .         .         .         .         .           g.10964
cccctgagtgccttgcctcagactaccattgcctgaggcttgggcacagtggttggcagt  c.224-421

.         .         .         .         .         .           g.11024
gaggctgtccctgagggcccaaggccttttacatggttcagggacacattgtccaattgc  c.224-361

.         .         .         .         .         .           g.11084
tccagatagccaaggtacttaagaaatgtgtagaatctattaattcccaggaatcatgag  c.224-301

.         .         .         .         .         .           g.11144
ggcccttgggagcaaaagcttaagcagagggatgaggttctaagtgaaatttcaggattc  c.224-241

.         .         .         .         .         .           g.11204
agccagcctgcaggtgaggtatttggggaaacttcacacctccaggtgaattctcactag  c.224-181

.         .         .         .         .         .           g.11264
ggaattctgaagtccttggtgctttcaacaccccgatggtcttggggaaggtcgcaggca  c.224-121

.         .         .         .         .         .           g.11324
gtggtgatgttggggtcaggagatgctgccttgcctggcctcctggaatcccagagttct  c.224-61

.         .         .         .         .         .           g.11384
ctggaagtgaggattactgcatttctaattgtggtctgatcattgcttggtcttttgcag  c.224-1


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