(used for variant description)
(last modified April 26, 2021)
This file was created to facilitate the description of sequence variants on transcript NM_016025.3 in the METTL9 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000016.9, covering METTL9 transcript NM_016025.3.
(upstream sequence)
. g.5019
ggaagggaagggggaggtg c.-181
. . . . . . g.5079
ccgaggctgcgcgccggctgctcctccccacccccagcctttgccctgaagggggctgga c.-121
. . . . . . g.5139
tgggcaaggcggccgcgatggctcgagctcgggcggtggcggcggtggccggaggcggcg c.-61
. . . . . . g.5199
gtgcctcctcctcctcgccccggcgccggcggtgatccgagcgagcggccgcggcccccg c.-1
. . . . . . g.5259
ATGAGACTGCTGGCGGGCTGGCTGTGCCTGAGCCTGGCGTCCGTGTGGCTGGCGCGGAGG c.60
M R L L A G W L C L S L A S V W L A R R p.20
. . . . . . g.5319
ATGTGGACGCTGCGGAGCCCGCTCACCCGCTCCCTGTACGTGAACATGACTAGCGGCCCG c.120
M W T L R S P L T R S L Y V N M T S G P p.40
. . . . | 02 . . g.18125
GGTGGGCCGGCGGCGGCCGCGGGCGGCAGGAAGGAGAACCACCAG | TGGTATGTGTGCAAC c.180
G G P A A A A G G R K E N H Q | W Y V C N p.60
. . . . . . g.18185
AGAGAGAAATTATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGA c.240
R E K L C E S L Q A V F V Q S Y L D Q G p.80
. . . . . . g.18245
ACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTATCCAATTATAT c.300
T Q I F L N N S I E K S G W L F I Q L Y p.100
. . . . . | 03 . g.23334
CATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGG | GTTG c.360
H S F V S S V F S L F M S R T S I N G | L p.120
. . . . . . g.23394
CTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGATCAGTTTCAGAGACTGCTTAAAATT c.420
L G R G S M F V F S P D Q F Q R L L K I p.140
. . . . . . g.23454
AATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGGAGAAGTCACA c.480
N P D W K T H R L L D L G A G D G E V T p.160
. . . . . . g.23514
AAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATA c.540
K I M S P H F E E I Y A T E L S E T M I p.180
. . | 04 . . . . g.30430
TGGCAGCTTCAGAAAAAGAAATACAG | AGTCCTTGGTATAAATGAATGGCAGAATACGGGG c.600
W Q L Q K K K Y R | V L G I N E W Q N T G p.200
. . . . . . g.30490
TTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCAGCCCCTGACT c.660
F Q Y D V I S C L N L L D R C D Q P L T p.220
. . . . . . g.30550
TTGTTAAAAGATATCAGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTT c.720
L L K D I R S V L E P T R G R V I L A L p.240
. . . | 05 . . . g.60721
GTCCTCCCCTTTCATCCCTATGTGGAAAACG | TAGGTGGCAAGTGGGAGAAACCATCAGAA c.780
V L P F H P Y V E N V | G G K W E K P S E p.260
. . . . . . g.60781
ATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGAATAGTCTGCCTGAAGTTTTC c.840
I L E I K G Q N W E E Q V N S L P E V F p.280
. . . . . . g.60841
AGAAAAGCTGGTTTTGTTATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGAC c.900
R K A G F V I E A F T R L P Y L C E G D p.300
. . . . . g.60898
ATGTATAATGACTACTACGTTCTGGATGACGCTGTCTTTGTTCTCAAACCAGTATAA c.957
M Y N D Y Y V L D D A V F V L K P V X p.318
. . . . . . g.60958
acacgtggaggtcgaagtcttcagagtccgcaccctccgggatgtgcccttggaagaggg c.*60
. . . . . . g.61018
tctgtgttcacaattacgtgaagggaggacccttggggaccgccattctaaatatcatgt c.*120
. . . . . . g.61078
aggaatttaaaaagccaaaatactaattatttctttgtagtgtgtaaaggaatgttttta c.*180
. . . . . . g.61138
aaagacaaaaacccaactctttgtggatttttatcaactctttactcagagccactctcc c.*240
. . . . . . g.61198
aatgcaggtcacactccaattatgatggaagatattttttatacttaattgcagtaggga c.*300
. . . . . . g.61258
ctcattcccagacaaagcaatagtcacgacttcatggaaccaatcaatggattgtttttt c.*360
. . . . . . g.61318
gaagactggcaataaagctgtccattcaattccaaatactggttttaaggtatagccact c.*420
. . . . . . g.61378
gatattctttcatgtttagaaattctttctgttattattcaagaaaatgtttttaatcat c.*480
. . . . . . g.61438
gctaataaacttttttggagatgactttggcatcatgtttgaattcatataaagctcccc c.*540
. . . . . . g.61498
tagcattttttattggtttggcttcaggagtacccaaatagtagcattatgagaatgacg c.*600
. . . . . . g.61558
cagacaatttgaataggggggaaggaaggcttcagacttgggggaaggggagattattgc c.*660
. . . . . . g.61618
aaattgcagtgaacactgagtcagtaaaaaaaaaaaacagaaacaaaaacccagcctcat c.*720
. . . . . . g.61678
tcagatacagaacttcagggacccctccccccacccccccagttaatgctgctgtgaaaa c.*780
. . . . . . g.61738
atgcaaaataacctggttctgactttgtgatcactcatgtcccatacactgaactttgtt c.*840
. . . . . . g.61798
tttttctggacaatctcaggttctcagaattgaaacattcagttttgtctactgacaaaa c.*900
. . . . . . g.61858
tgcaactaaaaatgttttaattcaacttcttactctacacttatatacctctctcccaga c.*960
. . . . . . g.61918
gcttggctcttccctgaaatccttaaaggagtttattatttgccaagaatatggtttgat c.*1020
. . . . . . g.61978
gaagaccgtgtcagactcatgcattctggaatccgtgagtgcctccaaccataaacccag c.*1080
. . . . . . g.62038
aaatgctgccatagaggaacccattagcaagatcaataaccatcgtggatattccaaaga c.*1140
. . . . . . g.62098
gcagagcatttaacccagaatctgaaatctcagtaataacagaaatgtcaatatgagatt c.*1200
. . . . . . g.62158
gtggttattaacaatatgttatcctcactactttatttcttttttcatccaggtgtttca c.*1260
. . . . . . g.62218
ttaagtattctcatttatatgctcatagaagtcatcagatcaacacattcactccaacac c.*1320
. . . . . . g.62278
ctgggtataaaggcgaattaaaacctgaagaattactttattattcattaagaactgcat c.*1380
. . . . . . g.62338
tcccacatcctcacaccaatatcttccactgttactgtgcagtcataataagagttgggt c.*1440
. . . . . . g.62398
tatgtgatttatgcaaaattgttattggtgtgttctaatgatttttttccaggaattcaa c.*1500
. . . . . . g.62458
gtaagtgaagtacaaatacttagcaccatagattgtaaaaatagaaagaggaaatgagaa c.*1560
. . . . . . g.62518
aacttaatgtcgttcttgtacagttgagttttgcttctttataaactgtctgttaaaatc c.*1620
. . . . . . g.62578
aggggttgctgttagactgtcaagcagaagtgatggatgttcaaggaggcaggttgcccc c.*1680
. . . . . . g.62638
aaagtgttttctaactttcaagtagagaactttatgctctaataagaaaaatacaactca c.*1740
. . . . . . g.62698
ttcttaaccacccccccaaaacagagaaaacacatacatttatgcattttaaagataaaa c.*1800
. . . . . . g.62758
agtagtttctcaaaaaaatctgaagttctctgaaaaccagcttattaaaagtgctgtttt c.*1860
. . . . . . g.62818
gtggtgaaaattgaaaccaaatccactcacatttcctatcgggtcttgaaattcttggtg c.*1920
. . . . . . g.62878
gtgtgtcaccattccactagatggcagtgttgcttactgagtgtcaatggcttttttccc c.*1980
. . . . . g.62937
cgtaaatggaatcatgtttttctcccccaaagtacaataaagctgccttgtctgcacca c.*2039
(downstream sequence)
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