(used for variant description)
(last modified June 26, 2015)
This file was created to facilitate the description of sequence variants on transcript NM_133433.3 in the NIPBL gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_006987.1, covering NIPBL transcript NM_133433.3.
(upstream sequence)
. g.4895
tccggtcggcattttgttc c.-481
. . . . . . g.4955
tgagagggagagacggaacgagagagagacacacacagggctccttccccccgccctccc c.-421
. . . . . . g.5015
ccccctccctccgtcggtaccgactcacccgacaccaccaagccgcagggagggacgccc c.-361
. . . . . . g.5075
ccgccgacaggagaattggttcccgggcccgcggcgatgcccccccggtagctcgggccc c.-301
. . . . . . g.5135
gtggtcgggtgtttgtgagtgtttctatgtgggagaaggaggaggaggaggaagaagaag c.-241
. . . . . . g.5195
caacgatttgtcttctcggctggtctccccccggctctacatgttccccgcactgaggag c.-181
. . . . . . g.5255
acggaagaggagccgtagccaccccccctcccggcccggattatagtctctcgccacagc c.-121
. . . . . | 02 . g.81754
ggcctcggcctccccttggattcagacgccgattcgcccag | tgtttgggaaatgggaagt c.-61
. . . . . . g.81814
aatgacagctggcacctgaactaagtacttttataggcaacaccattccagaaattcagg c.-1
. . . . . . g.81874
ATGAATGGGGATATGCCCCATGTCCCCATTACTACTCTTGCGGGGATTGCTAGTCTCACA c.60
M N G D M P H V P I T T L A G I A S L T p.20
| 03 . . . . . . g.83645
GACC | TCCTGAACCAGCTGCCTCTTCCATCTCCTTTACCTGCTACAACTACAAAGAGCCTT c.120
D L | L N Q L P L P S P L P A T T T K S L p.40
. . . . . . g.83705
CTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGCCTTTTGGCTTGTAGGGATGACAAT c.180
L F N A R I A E E V N C L L A C R D D N p.60
. . . . . | 04 . g.86231
TTGGTTTCACAGCTTGTCCATAGCCTCAACCAGGTATCAACAGATCACAT | AGAGTTGAAA c.240
L V S Q L V H S L N Q V S T D H I | E L K p.80
. . . . . . g.86291
GATAACCTTGGCAGTGATGACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCCGTCCTG c.300
D N L G S D D P E G D I P V L L Q A V L p.100
. . . . . | 05 g.89603
GCAAGGAGTCCTAATGTTTTCAGGGAGAAAAGCATGCAGAACAGATATGTACAAAGTG | GA c.360
A R S P N V F R E K S M Q N R Y V Q S G | p.120
. . . . . . g.89663
ATGATGATGTCTCAGTATAAACTTTCTCAGAATTCCATGCACAGTAGTCCTGCATCTTCC c.420
M M M S Q Y K L S Q N S M H S S P A S S p.140
. . . | 06 . . g.90262
AATTATCAACAAACCACTATCTCACATAGCCCCTCCAG | CCGGTTTGTGCCACCACAGACA c.480
N Y Q Q T T I S H S P S S | R F V P P Q T p.160
. . . . . . g.90322
AGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCA c.540
S S G N R F M P Q Q N S P V P S P Y A P p.180
. . . . . . g.90382
CAAAGCCCTGCAGGATACATGCCATATTCCCATCCTTCAAGTTACACAACACATCCACAG c.600
Q S P A G Y M P Y S H P S S Y T T H P Q p.200
. | 07 . . . . . g.99043
ATGCAACAAG | CATCGGTATCAAGTCCCATTGTTGCAGGTGGTTTGAGAAACATACATGAT c.660
M Q Q A | S V S S P I V A G G L R N I H D p.220
. . . . . . g.99103
AATAAAGTTTCTGGTCCGTTGTCTGGCAATTCAGCTAATCATCATGCTGATAATCCTAGA c.720
N K V S G P L S G N S A N H H A D N P R p.240
. . . . . | 08 . g.100071
CATGGTTCAAGTGAGGACTACCTACACATGGTGCACAGGCTAAGTAGTGAC | GATGGAGAT c.780
H G S S E D Y L H M V H R L S S D | D G D p.260
. . . . . . g.100131
TCTTCAACAATGAGGAATGCTGCATCTTTTCCCTTGAGATCTCCACAGCCAGTATGCTCC c.840
S S T M R N A A S F P L R S P Q P V C S p.280
. . | 09 . . . g.103925
CCTGCTGGAAGTGAAGGAACTCCTAAAG | GCTCAAGACCACCTTTAATCCTACAATCTCAG c.900
P A G S E G T P K G | S R P P L I L Q S Q p.300
. . . . . . g.103985
TCTCTACCTTGTTCATCACCTCGAGATGTTCCACCAGATATCTTGCTAGATTCTCCAGAA c.960
S L P C S S P R D V P P D I L L D S P E p.320
. . . . . . g.104045
AGAAAACAAAAGAAGCAGAAGAAAATGAAATTAGGCAAGGATGAAAAAGAGCAGAGTGAG c.1020
R K Q K K Q K K M K L G K D E K E Q S E p.340
. . . . . . g.104105
AAAGCGGCAATGTATGATATAATTAGTTCTCCATCCAAGGACTCTACTAAACTTACATTA c.1080
K A A M Y D I I S S P S K D S T K L T L p.360
. . . . . . g.104165
AGACTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAAGAGGATATGATTTCTGGTGTG c.1140
R L S R V R S S D M D Q Q E D M I S G V p.380
. . . . . . g.104225
GAAAATAGCAATGTTTCAGAAAATGATATTCCTTTTAATGTGCAGTACCCAGGACAGACT c.1200
E N S N V S E N D I P F N V Q Y P G Q T p.400
. . . . . . g.104285
TCAAAAACACCCATTACTCCACAAGATATAAACCGCCCACTAAATGCTGCTCAATGTTTG c.1260
S K T P I T P Q D I N R P L N A A Q C L p.420
. . . . . . g.104345
TCGCAGCAAGAACAAACAGCATTCCTTCCAGCAAATCAAGTGCCTGTTTTACAACAGAAC c.1320
S Q Q E Q T A F L P A N Q V P V L Q Q N p.440
. . . . . . g.104405
ACTTCAGTTGCTGCAAAACAACCCCAGACTTCTGTGGTACAGAATCAACAACAGATATCA c.1380
T S V A A K Q P Q T S V V Q N Q Q Q I S p.460
. . . . . . g.104465
CAACAGGGACCTATATATGATGAAGTGGAATTGGATGCATTGGCTGAAATTGAGCGAATA c.1440
Q Q G P I Y D E V E L D A L A E I E R I p.480
. . . . . | 10 . g.112798
GAGAGAGAATCAGCTATTGAAAGGGAGCGCTTCTCAAAAGAAGTTCAAGATAAAG | ATAAG c.1500
E R E S A I E R E R F S K E V Q D K D | K p.500
. . . . . . g.112858
CCTTTGAAAAAAAGAAAACAAGATTCTTACCCACAGGAGGCTGGGGGTGCTACAGGAGGT c.1560
P L K K R K Q D S Y P Q E A G G A T G G p.520
. . . . . . g.112918
AATAGACCAGCTTCTCAGGAGACGGGTTCTACGGGAAATGGGTCAAGGCCAGCATTAATG c.1620
N R P A S Q E T G S T G N G S R P A L M p.540
. . . . . . g.112978
GTTAGCATTGATCTTCATCAGGCAGGAAGAGTGGACTCTCAGGCTTCTATAACTCAGGAT c.1680
V S I D L H Q A G R V D S Q A S I T Q D p.560
. . . . . . g.113038
TCAGACTCCATAAAAAAGCCTGAAGAAATCAAACAATGTAATGATGCACCTGTTTCTGTT c.1740
S D S I K K P E E I K Q C N D A P V S V p.580
. . . . . . g.113098
CTTCAGGAAGATATTGTTGGAAGTCTTAAATCTACACCAGAAAACCATCCTGAGACACCT c.1800
L Q E D I V G S L K S T P E N H P E T P p.600
. . . . . . g.113158
AAAAAAAAGTCTGATCCTGAGCTTTCAAAGAGTGAAATGAAACAAAGTGAAAGTAGATTA c.1860
K K K S D P E L S K S E M K Q S E S R L p.620
. . . . . . g.113218
GCAGAATCTAAACCAAATGAAAACCGATTGGTGGAGACAAAATCAAGTGAAAATAAGTTA c.1920
A E S K P N E N R L V E T K S S E N K L p.640
. . . . . . g.113278
GAAACTAAAGTTGAGACCCAAACAGAAGAACTTAAACAGAATGAGAGCAGAACAACTGAA c.1980
E T K V E T Q T E E L K Q N E S R T T E p.660
. . . . . . g.113338
TGCAAACAAAACGAGAGCACCATAGTTGAGCCTAAACAAAATGAAAATAGACTGTCTGAC c.2040
C K Q N E S T I V E P K Q N E N R L S D p.680
. . . . . . g.113398
ACAAAACCAAATGACAACAAACAAAATAATGGCAGATCAGAAACAACAAAATCAAGGCCT c.2100
T K P N D N K Q N N G R S E T T K S R P p.700
. . . . . . g.113458
GAAACCCCAAAGCAAAAGGGTGAAAGCCGGCCTGAGACTCCAAAACAAAAGAGTGATGGG c.2160
E T P K Q K G E S R P E T P K Q K S D G p.720
. . . . . . g.113518
CATCCTGAAACCCCAAAACAGAAGGGTGATGGAAGGCCTGAAACTCCAAAGCAAAAAGGT c.2220
H P E T P K Q K G D G R P E T P K Q K G p.740
. . . . . . g.113578
GAGAGCCGCCCTGAAACTCCAAAGCAAAAAAATGAAGGGCGACCTGAAACACCAAAACAC c.2280
E S R P E T P K Q K N E G R P E T P K H p.760
. . . . . . g.113638
AGGCATGACAATAGGAGGGATTCTGGAAAGCCATCTACAGAGAAAAAACCTGAAGTGTCT c.2340
R H D N R R D S G K P S T E K K P E V S p.780
. . . . . . g.113698
AAACATAAACAAGATACTAAATCTGACTCACCTCGGTTAAAATCAGAACGAGCTGAAGCC c.2400
K H K Q D T K S D S P R L K S E R A E A p.800
. . . . . . g.113758
TTAAAGCAGAGACCTGATGGGCGATCTGTTTCTGAGTCACTAAGACGTGACCATGATAAT c.2460
L K Q R P D G R S V S E S L R R D H D N p.820
. . . . . . g.113818
AAACAAAAATCAGATGACAGGGGTGAATCAGAGCGACATCGAGGGGATCAGTCTAGGGTT c.2520
K Q K S D D R G E S E R H R G D Q S R V p.840
. . . . . . g.113878
CGAAGACCAGAAACATTGAGATCCTCTAGTAGAAATGAACATGGCATTAAATCTGATAGT c.2580
R R P E T L R S S S R N E H G I K S D S p.860
. . . . . . g.113938
TCAAAAACTGATAAACTAGAACGAAAACACAGGCATGAATCAGGGGACTCAAGGGAAAGA c.2640
S K T D K L E R K H R H E S G D S R E R p.880
. . . . . . g.113998
CCATCTTCTGGGGAACAAAAATCAAGACCTGACAGTCCTCGTGTTAAACAAGGAGATTCT c.2700
P S S G E Q K S R P D S P R V K Q G D S p.900
. . . . . . g.114058
AATAAATCAAGATCTGATAAACTTGGTTTTAAATCACCAACTAGTAAAGATGACAAAAGG c.2760
N K S R S D K L G F K S P T S K D D K R p.920
. . . . . . g.114118
ACAGAGGGTAACAAGAGTAAAGTAGACACTAATAAAGCACACCCTGACAATAAGGCAGAA c.2820
T E G N K S K V D T N K A H P D N K A E p.940
. . . . . . g.114178
TTTCCAAGTTATTTGTTGGGGGGCAGGTCTGGTGCGTTGAAAAATTTTGTCATTCCGAAA c.2880
F P S Y L L G G R S G A L K N F V I P K p.960
. . . . . . g.114238
ATCAAGAGGGATAAAGATGGCAATGTTACTCAGGAGACAAAGAAAATGGAAATGAAAGGA c.2940
I K R D K D G N V T Q E T K K M E M K G p.980
. . . . . . g.114298
GAGCCGAAAGACAAAGTAGAAAAAATAGGATTAGTTGAAGATCTAAATAAAGGAGCTAAG c.3000
E P K D K V E K I G L V E D L N K G A K p.1000
. . . . . . g.114358
CCTGTAGTTGTGCTACAAAAACTGTCTTTGGATGATGTTCAGAAACTTATTAAAGATAGA c.3060
P V V V L Q K L S L D D V Q K L I K D R p.1020
. . . . . . g.114418
GAGGACAAATCAAGAAGTTCCCTTAAACCTATCAAGAATAAACCATCAAAGTCAAATAAA c.3120
E D K S R S S L K P I K N K P S K S N K p.1040
| 11 . . . . . . g.123798
G | GTAGTATAGATCAATCAGTGTTAAAAGAATTACCCCCTGAACTCCTGGCAGAAATTGAG c.3180
G | S I D Q S V L K E L P P E L L A E I E p.1060
. . . . . . g.123858
TCCACCATGCCACTTTGTGAACGTGTGAAAATGAACAAACGCAAGCGTAGCACAGTTAAT c.3240
S T M P L C E R V K M N K R K R S T V N p.1080
. . . . . . g.123918
GAAAAGCCAAAATATGCTGAAATCAGTTCAGATGAAGATAATGATAGTGATGAAGCTTTT c.3300
E K P K Y A E I S S D E D N D S D E A F p.1100
| 12 . . . . . . g.128546
GAAT | CCTCTAGGAAACGACATAAAAAAGATGATGATAAAGCTTGGGAATATGAAGAGCGT c.3360
E S | S R K R H K K D D D K A W E Y E E R p.1120
. . . . . . g.128606
GACAGAAGAAGCTCTGGGGATCATAGGAGAAGTGGCCACTCTCATGAAGGAAGAAGGAGT c.3420
D R R S S G D H R R S G H S H E G R R S p.1140
. . . . . . g.128666
TCAGGTGGTGGTCGTTATCGAAACCGAAGTCCGTCAGATTCTGACATGGAAGATTATTCT c.3480
S G G G R Y R N R S P S D S D M E D Y S p.1160
. . | 13 . . . . g.128972
CCTCCTCCCAGCCTTAGTGAGG | TTGCTAGGAAAATGAAGAAAAAAGAAAAACAGAAGAAA c.3540
P P P S L S E V | A R K M K K K E K Q K K p.1180
. . . | 14 . . . g.129132
AGGAAAGCATATGAACCAAAACTAACACCTGAAG | AAATGATGGACTCTTCAACTTTTAAG c.3600
R K A Y E P K L T P E E | M M D S S T F K p.1200
. . . . . . g.129192
AGATTCACAGCCTCAATAGAGAATATTTTGGATAATTTGGAAGATATGGATTTTACTGCG c.3660
R F T A S I E N I L D N L E D M D F T A p.1220
| 15 . . . . . . g.130835
TTTG | GTGATGATGATGAAATTCCTCAGGAACTGCTCTTAGGAAAACATCAGCTTAATGAA c.3720
F G | D D D E I P Q E L L L G K H Q L N E p.1240
. . . . | 16 . g.131390
CTTGGCAGTGAATCTGCTAAAATAAAAGCAATGGGTATAATGGATAAG | CTTTCAACTGAC c.3780
L G S E S A K I K A M G I M D K | L S T D p.1260
. . . . . . g.131450
AAAACTGTGAAAGTCTTAAATATCTTGGAGAAGAATATTCAGGATGGGTCAAAGCTTTCC c.3840
K T V K V L N I L E K N I Q D G S K L S p.1280
. | 17 . . . . . g.134519
ACTTTGTTAAATCAT | AATAACGATACTGAAGAAGAAGAAAGGTTATGGAGAGACCTTATT c.3900
T L L N H | N N D T E E E E R L W R D L I p.1300
. . . . . . g.134579
ATGGAGAGAGTTACAAAATCAGCGGATGCTTGTCTTACAACTATCAACATTATGACATCC c.3960
M E R V T K S A D A C L T T I N I M T S p.1320
. . . . . . g.134639
CCTAACATGCCAAAAGCTGTGTACATTGAGGATGTAATTGAAAGAGTTATACAGTACACT c.4020
P N M P K A V Y I E D V I E R V I Q Y T p.1340
. . . . . . g.134699
AAATTTCATTTGCAGAATACACTTTATCCTCAGTATGATCCTGTTTACAGATTAGATCCT c.4080
K F H L Q N T L Y P Q Y D P V Y R L D P p.1360
| 18. . . . . . g.135493
CATGGAG | GAGGCTTATTAAGTTCAAAAGCAAAACGGGCTAAATGTTCTACCCATAAGCAG c.4140
H G G | G L L S S K A K R A K C S T H K Q p.1380
. . . . . . g.135553
AGAGTAATAGTAATGCTTTATAACAAAGTTTGTGACATTGTTAGCAGCTTATCAGAATTG c.4200
R V I V M L Y N K V C D I V S S L S E L p.1400
. . . | 19 . . g.136146
CTAGAGATACAACTTCTTACAGACACAACAATTCTTCAG | GTTTCATCTATGGGAATAACA c.4260
L E I Q L L T D T T I L Q | V S S M G I T p.1420
. . . . . . g.136206
CCATTTTTTGTGGAAAATGTCAGTGAACTACAGTTGTGTGCCATTAAGTTAGTCACTGCA c.4320
P F F V E N V S E L Q L C A I K L V T A p.1440
| 20 . . . . . . g.136800
| GTATTCTCAAGATATGAAAAACATAGGCAGTTAATTTTGGAAGAAATTTTTACTTCACTT c.4380
| V F S R Y E K H R Q L I L E E I F T S L p.1460
. . . . | 21 . . g.138223
GCAAGATTACCAACCAGCAAGAGGAGTTTAAGGAACTTCAG | GTTAAACAGTAGTGATATG c.4440
A R L P T S K R S L R N F R | L N S S D M p.1480
. . . . . . g.138283
GATGGAGAACCTATGTATATTCAGATGGTTACAGCACTGGTTTTACAACTTATTCAGTGT c.4500
D G E P M Y I Q M V T A L V L Q L I Q C p.1500
. . . . . . g.138343
GTGGTACACTTACCATCATCAGAGAAGGACTCTAATGCAGAAGAAGATTCAAATAAAAAA c.4560
V V H L P S S E K D S N A E E D S N K K p.1520
| 22 . . . . . . g.142860
| ATTGACCAGGATGTTGTCATTACTAACTCTTATGAAACAGCTATGCGAACAGCCCAAAAC c.4620
| I D Q D V V I T N S Y E T A M R T A Q N p.1540
. . | 23 . . . . g.144192
TTCCTCTCCATCTTCCTTAAAAA | ATGTGGTAGTAAGCAAGGTGAAGAAGATTACAGACCA c.4680
F L S I F L K K | C G S K Q G E E D Y R P p.1560
. . . . . . g.144252
CTGTTTGAAAATTTTGTTCAAGACCTTCTTTCAACAGTCAATAAGCCTGAATGGCCAGCT c.4740
L F E N F V Q D L L S T V N K P E W P A p.1580
. . . | 24 . . . g.145160
GCTGAACTACTCCTTAGTTTGTTAGGGAGACTGTTG | GTTCATCAGTTCAGTAACAAGTCA c.4800
A E L L L S L L G R L L | V H Q F S N K S p.1600
. . . . . . g.145220
ACAGAGATGGCTTTAAGAGTGGCATCTCTTGATTACCTTGGAACTGTTGCTGCACGGCTA c.4860
T E M A L R V A S L D Y L G T V A A R L p.1620
. . . . . . g.145280
AGAAAAGATGCTGTTACAAGCAAAATGGATCAAGGATCTATAGAACGCATTTTAAAACAG c.4920
R K D A V T S K M D Q G S I E R I L K Q p.1640
| 25 . . . . . . g.147488
| GTTTCAGGAGGGGAAGATGAAATCCAACAATTACAAAAAGCATTGCTTGATTACTTGGAT c.4980
| V S G G E D E I Q Q L Q K A L L D Y L D p.1660
. . . | 26 . . . g.148606
GAAAACACTGAGACTGATCCTTCACTAGTG | TTTTCTCGTAAATTCTATATAGCCCAGTGG c.5040
E N T E T D P S L V | F S R K F Y I A Q W p.1680
. . . . . . g.148666
TTTCGAGACACAACTCTGGAAACAGAAAAAGCAATGAAATCACAAAAAGATGAAGAATCA c.5100
F R D T T L E T E K A M K S Q K D E E S p.1700
. . . . . . g.148726
TCTGAAGGAACACATCATGCAAAGGAAATTGAGACAACTGGCCAAATTATGCATCGAGCT c.5160
S E G T H H A K E I E T T G Q I M H R A p.1720
. . . . . . g.148786
GAAAACCGAAAAAAGTTTCTTAGAAGCATTATCAAAACCACACCTTCTCAGTTTAGCACA c.5220
E N R K K F L R S I I K T T P S Q F S T p.1740
| 27 . . . . . . g.148947
TTAAA | GATGAACTCTGATACTGTGGACTATGATGATGCTTGCTTGATTGTTCGATACTTG c.5280
L K | M N S D T V D Y D D A C L I V R Y L p.1760
. . . . | 28 . g.150180
GCCTCCATGAGGCCGTTTGCCCAGAGCTTTGATATTTATTTGACACAG | ATCCTACGAGTT c.5340
A S M R P F A Q S F D I Y L T Q | I L R V p.1780
. . . . . . g.150240
CTTGGTGAAAATGCAATTGCTGTTCGAACAAAAGCCATGAAGTGTTTGTCTGAGGTTGTT c.5400
L G E N A I A V R T K A M K C L S E V V p.1800
. . | 29. . . . g.150394
GCTGTAGACCCCAGTATTCTAGCAAGG | CTTGATATGCAACGAGGTGTTCATGGACGATTG c.5460
A V D P S I L A R | L D M Q R G V H G R L p.1820
. . . . . . g.150454
ATGGATAATTCGACTAGTGTCCGAGAAGCAGCAGTAGAATTACTAGGTCGATTTGTCCTT c.5520
M D N S T S V R E A A V E L L G R F V L p.1840
. . . . . | 30 . g.152708
TGTCGACCTCAGCTTGCTGAACAGTATTATGATATGCTGATTGAAAGAATATTG | GATACT c.5580
C R P Q L A E Q Y Y D M L I E R I L | D T p.1860
. . . . . . g.152768
GGTATCAGTGTCAGGAAAAGAGTAATAAAGATTCTCAGAGACATTTGTATTGAACAACCA c.5640
G I S V R K R V I K I L R D I C I E Q P p.1880
. . . . . . g.152828
ACATTTCCAAAAATCACAGAAATGTGTGTAAAAATGATTCGCAGAGTCAATGATGAAGAG c.5700
T F P K I T E M C V K M I R R V N D E E p.1900
| 31 . . . . . g.154397
GGCATTAAG | AAATTAGTAAATGAAACATTCCAGAAACTCTGGTTTACTCCAACTCCACAC c.5760
G I K | K L V N E T F Q K L W F T P T P H p.1920
. . . . | 32 . g.155488
AATGACAAAGAAGCAATGACAAGGAAAATTTTAAACATTACCGATGTG | GTTGCAGCATGC c.5820
N D K E A M T R K I L N I T D V | V A A C p.1940
. . . . | 33 . . g.164514
AGAGATACTGGATATGACTGGTTTGAGCAACTGCTTCAAAAC | TTGTTGAAGTCCGAAGAG c.5880
R D T G Y D W F E Q L L Q N | L L K S E E p.1960
. . . . . . g.164574
GATTCCTCATATAAACCTGTGAAGAAAGCTTGTACTCAACTTGTTGATAACCTAGTTGAG c.5940
D S S Y K P V K K A C T Q L V D N L V E p.1980
. . . | 34 . . . g.166748
CACATTCTTAAATATGAGGAATCTCTAGCTG | ACTCTGACAATAAAGGTGTGAATTCTGGA c.6000
H I L K Y E E S L A D | S D N K G V N S G p.2000
. . . . . . g.166808
AGATTGGTAGCTTGCATAACCACTTTGTTCTTATTCAGCAAAATAAGACCCCAGCTCATG c.6060
R L V A C I T T L F L F S K I R P Q L M p.2020
. . . . | 35 . g.172476
GTTAAACATGCAATGACTATGCAACCATACCTTACCACTAAATGTAGT | ACGCAAAATGAT c.6120
V K H A M T M Q P Y L T T K C S | T Q N D p.2040
. . . . . . g.172536
TTCATGGTTATCTGCAATGTTGCAAAAATCCTAGAGCTAGTTGTACCACTGATGGAGCAT c.6180
F M V I C N V A K I L E L V V P L M E H p.2060
. . . . . . g.172596
CCAAGTGAAACTTTTCTTGCCACTATTGAGGAAGATCTAATGAAGCTCATCATCAAATAT c.6240
P S E T F L A T I E E D L M K L I I K Y p.2080
| 36 . . . . . g.172804
GGCATGACT | GTAGTGCAACATTGTGTGAGCTGTCTTGGAGCTGTTGTAAATAAAGTGACA c.6300
G M T | V V Q H C V S C L G A V V N K V T p.2100
. . . . | 37 . . g.173577
CAAAATTTTAAATTTGTGTGGGCTTGTTTCAATAGATACTATG | GTGCCATTTCAAAATTA c.6360
Q N F K F V W A C F N R Y Y G | A I S K L p.2120
. . . . . . g.173637
AAAAGTCAACACCAAGAGGACCCAAATAACACTTCACTTCTAACAAACAAACCAGCACTT c.6420
K S Q H Q E D P N N T S L L T N K P A L p.2140
. . . . . . g.173697
CTTAGATCCCTTTTCACCGTTGGAGCACTATGTCGGCATTTTGATTTTGATCTGGAAGAT c.6480
L R S L F T V G A L C R H F D F D L E D p.2160
. | 38 . . . . g.174268
TTTAAAGGCAACAGCAAG | GTTAACATAAAAGATAAAGTACTTGAACTATTGATGTATTTT c.6540
F K G N S K | V N I K D K V L E L L M Y F p.2180
. . . . | 39 . g.176630
ACAAAACACTCAGATGAAGAAGTACAAACAAAAGCTATCATTGGTCTAG | GATTTGCCTTT c.6600
T K H S D E E V Q T K A I I G L G | F A F p.2200
. . . . . . g.176690
ATTCAGCATCCAAGTCTAATGTTCGAGCAAGAAGTGAAGAATCTATATAATAATATTTTA c.6660
I Q H P S L M F E Q E V K N L Y N N I L p.2220
. . . . . . g.176750
TCTGATAAGAACTCCTCAGTCAATTTAAAAATACAAGTGTTAAAAAACCTCCAGACCTAC c.6720
S D K N S S V N L K I Q V L K N L Q T Y p.2240
. . . . | 40 . . g.177245
CTACAAGAAGAAGATACACGTATGCAGCAGGCAGATAGAGACT | GGAAGAAAGTTGCAAAA c.6780
L Q E E D T R M Q Q A D R D W | K K V A K p.2260
. . . . . . g.177305
CAGGAAGACTTAAAAGAAATGGGTGATGTTTCCTCAGGGATGAGTAGTTCCATCATGCAG c.6840
Q E D L K E M G D V S S G M S S S I M Q p.2280
. . . . . . g.177365
CTTTATCTCAAACAGGTGCTTGAGGCATTTTTTCACACCCAGTCAAGTGTACGCCACTTT c.6900
L Y L K Q V L E A F F H T Q S S V R H F p.2300
. . . . . | 41 . g.179902
GCCCTAAATGTCATTGCATTGACTCTAAATCAAGGTCTTATTCATCCAGTTCAG | TGTGTG c.6960
A L N V I A L T L N Q G L I H P V Q | C V p.2320
. . . . . . g.179962
CCATATTTAATTGCTATGGGCACAGACCCAGAACCTGCTATGCGGAACAAGGCTGATCAG c.7020
P Y L I A M G T D P E P A M R N K A D Q p.2340
. . . . | 42 . . g.180501
CAACTTGTGGAAATAGACAAAAAATATGCTGGATTCATTCAT | ATGAAAGCAGTGGCTGGT c.7080
Q L V E I D K K Y A G F I H | M K A V A G p.2360
. . . . . . g.180561
ATGAAGATGTCTTACCAGGTACAACAGGCAATCAACACATGCCTAAAAGATCCTGTAAGG c.7140
M K M S Y Q V Q Q A I N T C L K D P V R p.2380
. . . . . . g.180621
GGTTTCAGACAAGACGAGTCCTCTAGCGCTTTGTGTTCACACCTTTACTCCATGATCCGT c.7200
G F R Q D E S S S A L C S H L Y S M I R p.2400
. . . . . . g.180681
GGAAACCGCCAACACAGACGAGCCTTTCTTATTTCTTTACTCAACCTCTTTGATGACACA c.7260
G N R Q H R R A F L I S L L N L F D D T p.2420
| 43 . . . . . . g.185360
GCA | AAAACAGACGTGACTATGCTCTTGTATATAGCAGACAATCTAGCCTGTTTTCCATAC c.7320
A | K T D V T M L L Y I A D N L A C F P Y p.2440
. . . . . . g.185420
CAGACACAGGAAGAGCCGTTGTTTATAATGCATCATATAGACATTACACTCTCAGTTTCT c.7380
Q T Q E E P L F I M H H I D I T L S V S p.2460
. . . | 44 . . . g.187038
GGTAGTAACCTACTGCAGTCATTCAAGGAG | TCTATGGTAAAGGACAAAAGGAAAGAGAGA c.7440
G S N L L Q S F K E | S M V K D K R K E R p.2480
. . . . . . g.187098
AAATCATCACCTAGTAAGGAAAATGAGTCAAGCGACAGTGAAGAAGAAGTTTCCAGGCCT c.7500
K S S P S K E N E S S D S E E E V S R P p.2500
. . . . . . g.187158
CGGAAGTCACGGAAACGTGTAGATTCAGATTCAGATTCAGATTCAGAAGACGATATAAAT c.7560
R K S R K R V D S D S D S D S E D D I N p.2520
. . . . . . g.187218
TCAGTGATGAAATGTTTGCCAGAAAATTCAGCTCCTTTAATCGAATTTGCAAATGTGTCC c.7620
S V M K C L P E N S A P L I E F A N V S p.2540
. . . . . . g.187278
CAGGGTATTTTATTACTTCTCATGTTAAAACAACATTTGAAGAATCTTTGTGGATTTTCT c.7680
Q G I L L L L M L K Q H L K N L C G F S p.2560
| 45 . . . . . . g.189016
GATAG | TAAAATTCAGAAGTACTCTCCATCTGAATCTGCAAAAGTATATGATAAAGCGATA c.7740
D S | K I Q K Y S P S E S A K V Y D K A I p.2580
. . . . . . g.189076
AACCGAAAAACAGGAGTTCATTTTCATCCAAAACAAACACTGGACTTCCTGCGGAGTGAC c.7800
N R K T G V H F H P K Q T L D F L R S D p.2600
. . . . . . g.189136
ATGGCTAATTCCAAAATCACAGAAGAGGTGAAAAGGAGTATAGTAAAACAGTATCTAGAT c.7860
M A N S K I T E E V K R S I V K Q Y L D p.2620
| 46 . . . . . . g.191967
| TTCAAACTTCTCATGGAACATCTGGACCCTGATGAAGAAGAAGAAGAAGGGGAGGTTTCA c.7920
| F K L L M E H L D P D E E E E E G E V S p.2640
. . . . . . g.192027
GCTAGCACAAATGCTCGGAACAAAGCAATTACCTCACTGCTTGGAGGAGGCAGCCCTAAA c.7980
A S T N A R N K A I T S L L G G G S P K p.2660
. . . . . . g.192087
AATAATACAGCAGCAGAGACAGAAGATGATGAAAGTGATGGGGAGGATAGAGGAGGAGGC c.8040
N N T A A E T E D D E S D G E D R G G G p.2680
| 47 . . . . . g.192695
ACTTCAGGG | TCATTGAGAAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAG c.8100
T S G | S L R R S K R N S D S T E L A A Q p.2700
. . . . . . g.192755
ATGAATGAAAGTGTTGACGTCATGGATGTCATCGCTATTTGCTGTCCAAAGTACAAAGAT c.8160
M N E S V D V M D V I A I C C P K Y K D p.2720
. . . . . . g.192815
CGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATG c.8220
R P Q I A R V V Q K T S S G F S V Q W M p.2740
. . . . . . g.192875
GCAGGCTCCTACAGTGGCTCCTGGACTGAGGCTAAGCGCCGTGATGGCCGCAAACTGGTG c.8280
A G S Y S G S W T E A K R R D G R K L V p.2760
. . . . . . g.192935
CCTTGGGTAGACACTATTAAAGAGTCAGACATTATTTACAAAAAAATTGCTCTAACGAGT c.8340
P W V D T I K E S D I I Y K K I A L T S p.2780
. . . . . . g.192995
GCTAATAAGCTGACTAATAAAGTTGTTCAGACTTTACGATCCCTGTATGCCGCCAAGGAT c.8400
A N K L T N K V V Q T L R S L Y A A K D p.2800
. g.193010
GGGACTTCCAGCTAA c.8415
G T S S X p.2804
. . . . . . g.193070
tgaatttgtacatgcagccaaatttacaggaatttttttaaaaggcagaaaaacttgaaa c.*60
. . . . . . g.193130
taccaacattctggcaaaaaaaaatcagttttatgaagagtaagtggaacctgggatgca c.*120
. . . . . . g.193190
ggaacaaaagaaggaaatgttgggcaaacatttttgtgggagctcccttcgctgttgtgc c.*180
. . . . . . g.193250
agcagaaacagattctcagttcatttttactcccactgtattatagtttaacaaaaattg c.*240
. . . . . . g.193310
tttatatcttggaaaaaaaactttctgtttaaaaaaaataaacaagtgaatgttggaaat c.*300
. . . . . . g.193370
tagtctgttaatgttcttaataaagtgttcttggagtttaacctagcagcggatggcttt c.*360
. . . . . . g.193430
ctttagcttagcccagtttccagggaagcattgttttttccaggctgtaaaatggcagaa c.*420
. . . . . . g.193490
tctcctggatatataatttattctgttgaaaaaaaaaaaagcatgcagtatctatgacct c.*480
. . . . . . g.193550
atctgcagaaggagtttttgtaaatgtagattttgatgtattaggtcaccctgaaaacaa c.*540
. . . . . . g.193610
tacaagaaaagggatccccaggtaatctggtggagcgaatactgcaataaatttttttac c.*600
. . . . . . g.193670
ttctctttgttacttgtctgtttccatttgaatttcttattgtaaaaatctgtttaaatc c.*660
. . . . . . g.193730
catttatattattttacagtcttttatgtaaaatttattatatcactggttttcaaagca c.*720
. . . . . . g.193790
aaacataaaatattgtttatacagtttgtataggctgacttctgaataattggtatctat c.*780
. . . . . . g.193850
tattttcattcccataagagggtgtaaacaattaactccagggttttattgtatcctgca c.*840
. . . . . . g.193910
atatttagtattaactatatatgatttagcactgtgccaaacacattttcaagagtacat c.*900
. . g.193937
tttgatataaaaagaaactatagttta c.*927
(downstream sequence)
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