(used for variant description)
(last modified December 11, 2015)
This file was created to facilitate the description of sequence variants on transcript NM_198565.1 in the NRROS gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000003.11, covering NRROS transcript NM_198565.1.
(upstream sequence)
. . . . g.5044
ggtagcccagccccgcgttcggctgctctcgaggaggccggagc c.-61
. . . . . | 02 . g.19755
ccccggagacgatgcgccccgcgcagccgcctgcgcctgcgggagcc | ggctgcccttgag c.-1
. . . . . . g.19815
ATGGAGTTGCTGCCTCTTTGGCTCTGCCTGGGTTTTCACTTCCTGACCGTGGGCTGGAGG c.60
M E L L P L W L C L G F H F L T V G W R p.20
. . . . | 03 . g.24979
AACAGAAGCGGAACAGCCACAGCAGCCTCCCAAGGAGTCTGCAAGTTG | GTGGGTGGAGCC c.120
N R S G T A T A A S Q G V C K L | V G G A p.40
. . . . . . g.25039
GCTGACTGCCGAGGGCAGAGCCTCGCTTCGGTGCCCAGCAGCCTCCCGCCCCACGCCCGG c.180
A D C R G Q S L A S V P S S L P P H A R p.60
. . . . . . g.25099
ATGCTCACCCTGGATGCCAACCCTCTCAAGACCCTGTGGAATCACTCCCTCCAGCCTTAC c.240
M L T L D A N P L K T L W N H S L Q P Y p.80
. . . . . . g.25159
CCTCTCCTGGAGAGCCTCAGCCTGCACAGCTGCCACCTGGAGCGCATCAGCCGCGGCGCC c.300
P L L E S L S L H S C H L E R I S R G A p.100
. . . . . . g.25219
TTCCAGGAGCAAGGTCACCTGCGCAGCCTGGTCCTGGGGGACAACTGCCTCTCAGAGAAC c.360
F Q E Q G H L R S L V L G D N C L S E N p.120
. . . . . . g.25279
TACGAAGAGACGGCAGCCGCCCTCCACGCCCTGCCGGGCCTGCGGAGGCTGGACTTGTCA c.420
Y E E T A A A L H A L P G L R R L D L S p.140
. . . . . . g.25339
GGAAACGCCCTGACGGAGGACATGGCAGCCCTCATGCTCCAGAACCTCTCCTCGCTGCGG c.480
G N A L T E D M A A L M L Q N L S S L R p.160
. . . . . . g.25399
TCCGTGTCCCTGGCGGGGAACACCATCATGCGGCTGGACGACTCCGTCTTCGAGGGCCTG c.540
S V S L A G N T I M R L D D S V F E G L p.180
. . . . . . g.25459
GAGCGTCTCCGGGAGCTGGATCTGCAGAGGAACTACATCTTCGAGATCGAGGGCGGCGCT c.600
E R L R E L D L Q R N Y I F E I E G G A p.200
. . . . . . g.25519
TTCGACGGCCTGGCTGAGCTGAGGCACCTCAACCTGGCCTTCAACAACCTCCCCTGCATC c.660
F D G L A E L R H L N L A F N N L P C I p.220
. . . . . . g.25579
GTGGACTTCGGGCTCACGCGGCTGCGGGTCCTCAACGTCAGCTACAACGTCCTGGAGTGG c.720
V D F G L T R L R V L N V S Y N V L E W p.240
. . . . . . g.25639
TTCCTCGCGACCGGGGGAGAGGCTGCCTTCGAGCTGGAGACGCTGGACCTGTCTCACAAC c.780
F L A T G G E A A F E L E T L D L S H N p.260
. . . . . . g.25699
CAGCTGCTGTTCTTCCCGCTGCTGCCCCAGTACAGCAAGTTGCGGACCCTCCTGCTGCGC c.840
Q L L F F P L L P Q Y S K L R T L L L R p.280
. . . . . . g.25759
GACAACAACATGGGCTTCTACCGGGACCTGTACAACACCTCGTCGCCGAGGGAGATGGTG c.900
D N N M G F Y R D L Y N T S S P R E M V p.300
. . . . . . g.25819
GCCCAGTTCCTCCTCGTGGACGGCAACGTGACCAACATCACCACCGTCAGCCTCTGGGAA c.960
A Q F L L V D G N V T N I T T V S L W E p.320
. . . . . . g.25879
GAATTCTCCTCCAGCGACCTCGCAGATCTCCGCTTCCTGGACATGAGCCAGAACCAGTTC c.1020
E F S S S D L A D L R F L D M S Q N Q F p.340
. . . . . . g.25939
CAGTACCTGCCAGACGGCTTCCTGAGGAAAATGCCTTCCCTCTCCCACCTGAACCTCCAC c.1080
Q Y L P D G F L R K M P S L S H L N L H p.360
. . . . . . g.25999
CAGAATTGCCTGATGACGCTTCACATTCGGGAGCACGAGCCCCCCGGAGCGCTCACCGAG c.1140
Q N C L M T L H I R E H E P P G A L T E p.380
. . . . . . g.26059
CTGGACCTGAGCCACAACCAGCTGTCGGAGCTGCACCTGGCTCCGGGGCTGGCCAGCTGC c.1200
L D L S H N Q L S E L H L A P G L A S C p.400
. . . . . . g.26119
CTGGGCAGCCTGCGCTTGTTCAACCTGAGCTCCAACCAGCTCCTGGGCGTCCCCCCTGGC c.1260
L G S L R L F N L S S N Q L L G V P P G p.420
. . . . . . g.26179
CTCTTCGCCAATGCTAGGAACATCACTACACTTGACATGAGCCACAATCAGATCTCACTT c.1320
L F A N A R N I T T L D M S H N Q I S L p.440
. . . . . . g.26239
TGTCCCCTGCCAGCTGCCTCGGACCGGGTGGGCCCCCCTAGCTGTGTGGATTTCAGGAAT c.1380
C P L P A A S D R V G P P S C V D F R N p.460
. . . . . . g.26299
ATGGCATCTTTAAGGAGCCTGTCTCTGGAGGGCTGTGGCCTGGGGGCATTGCCAGACTGC c.1440
M A S L R S L S L E G C G L G A L P D C p.480
. . . . . . g.26359
CCATTCCAAGGGACCTCCCTGACCTACTTAGACCTCTCAAGCAACTGGGGGGTTCTGAAT c.1500
P F Q G T S L T Y L D L S S N W G V L N p.500
. . . . . . g.26419
GGGAGCCTCGCCCCACTCCAGGATGTTGCCCCCATGTTACAGGTCCTGTCTCTCAGGAAC c.1560
G S L A P L Q D V A P M L Q V L S L R N p.520
. . . . . . g.26479
ATGGGCCTCCACTCCAGCTTTATGGCGTTGGACTTCTCTGGGTTTGGGAATCTCAGGGAC c.1620
M G L H S S F M A L D F S G F G N L R D p.540
. . . . . . g.26539
TTAGATCTGTCGGGGAATTGCTTGACCACCTTCCCAAGGTTTGGGGGCAGCCTGGCCCTG c.1680
L D L S G N C L T T F P R F G G S L A L p.560
. . . . . . g.26599
GAGACCCTGGATCTCCGTAGAAACTCGCTCACAGCCCTTCCCCAGAAGGCTGTGTCTGAG c.1740
E T L D L R R N S L T A L P Q K A V S E p.580
. . . . . . g.26659
CAGCTCTCGAGAGGTCTGCGGACCATCTACCTCAGTCAGAATCCATATGACTGCTGTGGG c.1800
Q L S R G L R T I Y L S Q N P Y D C C G p.600
. . . . . . g.26719
GTGGATGGCTGGGGGGCCCTGCAGCATGGGCAGACGGTGGCCGACTGGGCCATGGTCACC c.1860
V D G W G A L Q H G Q T V A D W A M V T p.620
. . . . . . g.26779
TGCAACCTCTCCTCCAAGATCATCCGCGTGACGGAGCTGCCCGGAGGTGTGCCTCGGGAC c.1920
C N L S S K I I R V T E L P G G V P R D p.640
. . . . . . g.26839
TGCAAGTGGGAGCGGCTGGACCTGGGCCTGCTCTACCTCGTGCTCATCCTCCCCAGCTGC c.1980
C K W E R L D L G L L Y L V L I L P S C p.660
. . . . . . g.26899
CTCACCCTGCTGGTGGCCTGCACTGTCATCGTCCTCACTTTTAAGAAGCCTCTGCTTCAG c.2040
L T L L V A C T V I V L T F K K P L L Q p.680
. . . g.26938
GTCATCAAGAGCCGCTGCCACTGGTCCTCCGTTTACTGA c.2079
V I K S R C H W S S V Y X p.692
. . . . . . g.26998
cctggctgtgtgccaagactcgaaattcggtccgcacacaacaggacactttctctgcca c.*60
. . . . . . g.27058
gctttcaagatgtgatgcagaggccaagtctgacgaattgaagtttcaattaaaatttaa c.*120
. . . . . . g.27118
tatgtttccattcctcatcgcccaccccacccccgcccccaccaccgcccaagttctttt c.*180
. . . . . . g.27178
tccatcattataattcatcctcattatcttggtaaaatatttattaagtgactttttcag c.*240
. . . . g.27220
aaataaaaggcaacgtgtctcataaatattttttaaattaaa c.*282
(downstream sequence)
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