(used for variant description)
(last modified September 24, 2019)
This file was created to facilitate the description of sequence variants on transcript NM_032536.2 in the NTNG2 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000009.11, covering NTNG2 transcript NM_032536.2.
(upstream sequence)
. . . . . g.5056
cgctcagcccgggcgggcgatgcgggcggcgcgggcggccccctcccccggcccgc c.-721
. . . . . . g.5116
gtctccgggacggctgcgggcggcccccccggcggccggagggctccctggccccgatct c.-661
. . . . . . g.5176
gacggcggcggcggcggcggccacagcggcgggagcggcgcggggaaggagcagcggctc c.-601
. . . . . . g.5236
gcagccctcggcccgcgcccccacccagcgccagcccgaggggggaggcgcagcgccgga c.-541
. . . . . . | 02 g.9405
gggtggcggtcctcggccctcccaggtctccgcgccgggaagccgctccgagccggg | gct c.-481
. . . . . . g.9465
ggagggttgttttgccgttgtgttgagcacgtcacccattaagagccctttaaagacctg c.-421
. . . . . . g.9525
gattgattggaaggacaaaaattaaaagcaatctgatccagcctcatgcaggatccctgc c.-361
. . . . . . g.9585
ggattttctccttatcccatttccatccactgtcacaatttgagaatctgcctgatttga c.-301
. . . . . . g.9645
tcagattcacctccaggggaggtgtgataccagggttaggaggacgtgaagttatgggca c.-241
. . . . . . g.9705
actttctgatctgtccatcagcagtctgagaaacgctggctctgaattttccgtgtcggc c.-181
. . . . . . g.9765
cttttggaaacaacaagttcctcgctgtttgcaaagcttcagtgctcgggtccctgggac c.-121
. . . . . . g.9825
accccggccaccctcgcctggtagatgtggcatttccatgctgaggccgcgagtcccgcc c.-61
. . . . . . g.9885
tgaccccgtcgctgcctctccagggcttctctgggccgcgcctctgcagactgcgcagcc c.-1
. . . . . . g.9945
ATGCTGCATCTGCTGGCGCTCTTCCTGCACTGCCTCCCTCTGGCCTCTGGGGACTATGAC c.60
M L H L L A L F L H C L P L A S G D Y D p.20
. . . . . . g.10005
ATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGGAGTTCTACGCCTGCCAG c.120
I C K S W V T T D E G P T W E F Y A C Q p.40
. . . . . . g.10065
CCCAAGGTGATGCGCCTGAAGGACTACGTCAAGGTGAAGGTGGAGCCCTCAGGCATCACA c.180
P K V M R L K D Y V K V K V E P S G I T p.60
. . . | 03 . . . g.41046
TGTGGAGACCCCCCTGAGAGGTTCTGCTCCCAT | GAGAATCCCTACCTATGCAGCAACGAG c.240
C G D P P E R F C S H | E N P Y L C S N E p.80
. . . . . . g.41106
TGTGACGCCTCCAACCCGGACCTGGCCCACCCGCCCAGGCTCATGTTCGACAAGGAGGAG c.300
C D A S N P D L A H P P R L M F D K E E p.100
. . . . . . g.41166
GAGGGCCTGGCCACCTACTGGCAGAGCATCACCTGGAGCCGCTACCCCAGCCCGCTGGAA c.360
E G L A T Y W Q S I T W S R Y P S P L E p.120
. . . . . . g.41226
GCCAACATCACCCTTTCGTGGAACAAGACCGTGGAGCTGACCGACGACGTGGTGATGACC c.420
A N I T L S W N K T V E L T D D V V M T p.140
. . . . . . g.41286
TTCGAGTACGGCCGGCCCACGGTCATGGTCCTGGAGAAGTCCCTGGACAACGGGCGCACC c.480
F E Y G R P T V M V L E K S L D N G R T p.160
. . . . . . g.41346
TGGCAGCCCTACCAGTTCTACGCCGAGGACTGCATGGAGGCCTTCGGTATGTCCGCCCGC c.540
W Q P Y Q F Y A E D C M E A F G M S A R p.180
. . . . . . g.41406
CGGGCCCGCGACATGTCATCCTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCG c.600
R A R D M S S S S A H R V L C T E E Y S p.200
. . . . . . g.41466
CGCTGGGCAGGCTCCAAGAAGGAGAAGCACGTGCGCTTCGAGGTGCGGGACCGCTTCGCC c.660
R W A G S K K E K H V R F E V R D R F A p.220
. . . . . . g.41526
ATCTTTGCCGGCCCCGACCTGCGCAACATGGACAACCTCTACACGCGGCTGGAGAGCGCC c.720
I F A G P D L R N M D N L Y T R L E S A p.240
. . . . . . g.41586
AAGGGCCTCAAGGAGTTCTTCACCCTCACCGACCTGCGCATGCGGCTGCTGCGCCCGGCG c.780
K G L K E F F T L T D L R M R L L R P A p.260
. . . . . . g.41646
CTGGGCGGCACCTATGTGCAGCGGGAGAACCTCTACAAGTACTTCTACGCCATCTCCAAC c.840
L G G T Y V Q R E N L Y K Y F Y A I S N p.280
. | 04. . . . . g.69945
ATCGAGGTCATCGGCAG | GTGCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCGCGAG c.900
I E V I G R | C K C N L H A N L C S M R E p.300
. . . . . . g.70005
GGCAGCCTGCAGTGCGAGTGCGAGCACAACACCACCGGCCCCGACTGCGGCAAGTGCAAG c.960
G S L Q C E C E H N T T G P D C G K C K p.320
. . . . . . g.70065
AAGAATTTCCGCACCCGGTCCTGGCGGGCCGGCTCCTACCTGCCGCTGCCCCATGGCTCT c.1020
K N F R T R S W R A G S Y L P L P H G S p.340
. | 05 . . | 06 . . . g.82183
CCCAACGCCT | GTGCCACTGCAGGTTCCTTTGGCA | ACTGCGAATGCTACGGTCACTCCAAC c.1080
P N A C | A T A G S F G N | C E C Y G H S N p.360
. . . . . . g.82243
CGCTGCAGCTACATTGACTTCCTGAATGTGGTGACCTGCGTCAGCTGCAAGCACAACACG c.1140
R C S Y I D F L N V V T C V S C K H N T p.380
. . . . . . g.82303
CGAGGTCAGCACTGCCAGCACTGCCGGCTGGGCTACTACCGCAACGGCTCGGCAGAGCTG c.1200
R G Q H C Q H C R L G Y Y R N G S A E L p.400
. . | 07 . . . . g.84001
GATGATGAGAACGTCTGCATTG | AGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGG c.1260
D D E N V C I E | C N C N Q I G S V H D R p.420
. . . . . . g.84061
TGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCAAGTGCGACGAC c.1320
C N E T G F C E C R E G A A G P K C D D p.440
. . . | 08. . . g.84952
TGCCTCCCCACGCACTACTGGCGCCAGGGCTGCTACC | CCAACGTGTGCGACGACGACCAG c.1380
C L P T H Y W R Q G C Y P | N V C D D D Q p.460
. . . . . . g.85012
CTGCTGTGCCAGAACGGAGGCACCTGCCTGCAGAACCAGCGCTGCGCCTGCCCGCGCGGC c.1440
L L C Q N G G T C L Q N Q R C A C P R G p.480
. . . . . . g.85072
TACACCGGCGTGCGCTGCGAGCAGCCCCGCTGCGACCCCGCCGACGATGACGGCGGTCTG c.1500
Y T G V R C E Q P R C D P A D D D G G L p.500
. . . . . . g.85132
GACTGCGACCGCGCGCCCGGGGCCGCCCCGCGCCCCGCCACCCTGCTCGGCTGCCTGCTG c.1560
D C D R A P G A A P R P A T L L G C L L p.520
. . . g.85165
CTGCTGGGGCTGGCCGCCCGCCTGGGCCGCTGA c.1593
L L G L A A R L G R X p.530
. . . . . . g.85225
gccccgcccggaggacgctccccgcacccggaggccgggggtcccggggtcccggggcgg c.*60
. . . . . . g.85285
ggccggcgtccgaggccgggcggtgagaagggtgcggcccgaggtgctcccaggtgctac c.*120
. . . . . . g.85345
tcagcagggccccccgcccggcccgcgctcccgcccgcactgccctccccccgcagcagg c.*180
. . . . . . g.85405
ggcgccttgggactccggtccccgcgcctgcgatttggtttcgtttttcttttgtattat c.*240
. . . . . . g.85465
ccgccgcccagttccttttttgtctttctctctctctctttttttttttttttttctggc c.*300
. . . . . . g.85525
ggtgagccagagggtcgggagaaacgctgctcgccccacaccccgtcctgcctcccacca c.*360
. . . . . . g.85585
cacttacacacacgggactgtggccgacaccccctggcctgtgccaggctcacgggcggc c.*420
. . . . . . g.85645
ggcggaccccgacctccagttgcctacaattccagtcgctgacttggtcctgttttctat c.*480
. . . . . . g.85705
tctttatttttcctgcaacccaccagaccccaggcctcaccggaggcccggtgaccacgg c.*540
. . . . . . g.85765
aactcaccgtctgggggaggaggagagaaggaaggggtggggggcctggaaacttcgttc c.*600
. . . . . . g.85825
tgtagagaactatttttgtttgtattcactgtcccctgcaagggggacggggcgggagca c.*660
. . . . . . g.85885
ctggtcaccgcgggggccgatggtggagaatccgaggagtaaagagtttgctcactgctg c.*720
g.85887
cc c.*722
(downstream sequence)
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