opsin 1 (cone pigments), long-wave-sensitive (OPN1LW) - 6258 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5205
gtgagccagcaggcccgtggaggctgggtggctgcactgggggccaccggccacccacct  c.112+60

         .         .         .         .         .         .  g.5265
gccccgcccaagggaatctctcttctgcacgtccccaccagcagagaaggctttctccca  c.112+120

         .         .         .         .         .         .  g.5325
tagcttttctgatgacatgaattggggggtcctctccaaatctagaaggacaccataata  c.112+180

         .         .         .         .         .         .  g.5385
tcgaatatgcattctcaagccacacaggcttcccagcccctttgagaatccgaggccggg  c.112+240

         .         .         .         .         .         .  g.5445
gaagagtttatgtgctctttctttgtggcccgtagatgagtgtgttcactgctagcgaat  c.112+300

         .         .         .         .         .         .  g.5505
gacctctcattccacggagtccctcagcttcctggggaagagctgggtctgtctttacat  c.112+360

         .         .         .         .         .         .  g.5565
ttgaagccgaaagaggcaacatactgacacacccaagggaggcgggagggtggggaagac  c.112+420

         .         .         .         .         .         .  g.5625
agcagcagagggcaagaaacttctagaacttcagggtcggcaaagcctgtagcagtcatt  c.112+480

         .         .         .         .         .         .  g.5685
ttgtcaaactccatgatggggccacttggcttttggctgcacacctctgggggaagaggc  c.112+540

         .         .         .         .         .         .  g.5745
tgcattggcgcccagggccatctttccattcggagccgtcctgggagagagggctcaggc  c.112+600

         .         .         .         .         .         .  g.5805
ccaacagaaagctgaaagctctcatcagggcagcccgagtcctgccattgggagttgccc  c.112+660

         .         .         .         .         .         .  g.5865
aatccgaaagttttgcacgcaggccctcaaagaagctgaggacaccagtgaccgccccac  c.112+720

         .         .         .         .         .         .  g.5925
tcctggccctctccccaggtccctcctccaaaccaaattcctttggtgccttcaagaaca  c.112+780

         .         .         .         .         .         .  g.5985
tcgtgcaggccgggcacagtggctcacgcctgtaatcccagcactttgggaggcagaggc  c.112+840

         .         .         .         .         .         .  g.6045
gggcagatgacgaggtcaacagatagagatcatcctggccaacatactgaaacctcatgt  c.112+900

         .         .         .         .         .         .  g.6105
ctactaaaaatgcaaaaattagctgggcttggtggcgcatgcctgtagtcccagctactc  c.112+960

         .         .         .         .         .         .  g.6165
aggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgaga  c.112+1020

         .         .         .         .         .         .  g.6225
tcacgccactatgctccagcctggccacagagtgagactcttgtctcaaaacaaaacaaa  c.112+1080

         .         .         .         .         .         .  g.6285
acaaaaaacaacaacatcgtgcaggctgtggtttccagaagccacgccagctccttgatt  c.112+1140

         .         .         .         .         .         .  g.6345
gccaataaacatcccgctgtggggtggccaggaccgagtgccaattagtgacagagtgcc  c.112+1200

         .         .         .         .         .         .  g.6405
cagaccaaaccggatgaggatcttgcagttgacctcaacatgactgtgcccagaatttcc  c.112+1260

         .         .         .         .         .         .  g.6465
ttggtggcaatgtcaacagtctcttcctagatgcccccagacttcatcaatgcatgatgc  c.112+1320

         .         .         .         .         .         .  g.6525
ttcagtgcactcttttcaaatgtcggggtgggttttttttttttccacaaaacttcaagc  c.112+1380

         .         .         .         .         .         .  g.6585
atctactaaagtagagggaggagtgtaatgaactccggtacccatcactcagcttccacg  c.112+1440

         .         .         .         .         .         .  g.6645
gtttcatctcatttcatctgtgacccctccactaccctttcttcctgattcttggaagca  c.112+1500

         .         .         .         .         .         .  g.6705
aatccaagacatcacacccttccctctgtaaatctttactatgttcctctaggagaaaag  c.112+1560

         .         .         .         .         .         .  g.6765
ggctcttctcaatacataaccacaagtcatcatcacaccgacaagtgtaacagtatttcc  c.112+1620

         .         .         .         .         .         .  g.6825
tgaatagcttcaaatatcctagtagtgttcaaaaaatgtcatacgtattttcagtctgct  c.112+1680

         .         .         .         .         .         .  g.6885
tgaatcagggctcaaataaggtccacacattcagattgactgatatgccttttgactacc  c.112+1740

         .         .         .         .         .         .  g.6945
tttgaatctagaggttccctttctatctccctgcaatttatttgtggaagcaagcaagtc  c.112+1800

         .         .         .         .         .         .  g.7005
gttcatgacgtagcctaacaggcccctctgacgttgttcattatgatttttctgtaaatt  c.112+1860

         .         .         .         .         .         .  g.7065
ggtagttgatctgaggatctggccagaggtaggttggatttgttggtgtgttttggcaag  c.112+1920

         .         .         .         .         .         .  g.7125
gagagtgtctcttttctggggtgttggcagctactgaaactcaatgcccagaccaattaa  c.112+1980

         .         .         .         .         .         .  g.7185
accactggggatggaaaatgacggcattcggacaccttaccctgccttcacctattggtg  c.112+2040

         .         .         .         .         .         .  g.7245
accaaaaccttaacatcttcacaggtcttcttaccctgagggtatatgccactaggttgt  c.112+2100

         .         .         .         .         .         .  g.7305
gtagtaaaccggtgtgtttccagtcccttagaatagtccctctctaagtgatatgccact  c.112+2160

         .         .         .         .         .         .  g.7365
cagtggatatgcatttagcttcatttcttttgttgctgattttcagagattgctctgtaa  c.112+2220

         .         .         .         .         .         .  g.7425
atttaaacttttattttactttattttattttttcgagacagtcttactctgtcgcccag  c.112+2280

         .         .         .         .         .         .  g.7485
gctggagtgcagtggcgcgatctcagctcactgcaacttccgcctcctcggttcgagcga  c.112+2340

         .         .         .         .         .         .  g.7545
ttctcctgcctcagcctcccgaggagctgggactacaggtgcccgccaccacgcccagct  c.112+2400

         .         .         .         .         .         .  g.7605
aattttttttatttttagtagagacagggtttcaccatgttggccaggctggtctccaac  c.112+2460

         .         .         .         .         .         .  g.7665
tgctgacctcaagtcgtccgcccacctcggcttcccaaagtgctgggattacaggtgtga  c.112+2520

         .         .         .         .         .         .  g.7725
gccaccgcccccggccacttaaattttgttttataattatgtaataaaacagttaaaagt  c.112+2580

         .         .         .         .         .         .  g.7785
ctcaaattaaaatctagaaaagaaggtgtatttgaagaagtctggcttctctgcgccacc  c.112+2640

         .         .         .         .         .         .  g.7845
accgaccgccccttccctacctgcctgtatttcctcgaatcactttgcctgggagttgac  c.112+2700

         .         .         .         .         .         .  g.7905
tttgattctcttgctcattgcttcatgaaattcagttccagaactttcaggagggagggg  c.112+2760

         .         .         .         .         .         .  g.7965
taggccatgacaccagctctagttacactggtggcagctcctgtcccctcccccactgct  c.112+2820

         .         .         .         .         .         .  g.8025
gctgggacctgttctctcctttgcccccttgtccctgcactgcccaatttggaccgcaag  c.112+2880

         .         .         .         .         .         .  g.8085
ggttgccagggaagggcactggctgccttgttttcagaggtcgtagcacctagattgctc  c.112+2940

         .         .         .         .         .         .  g.8145
cagccccttgcacttgcctgcaggccagagtgtcccaaaccctcccagtctcagctgctc  c.112+3000

         .         .         .         .         .         .  g.8205
ttccccagttcacccaaggtacttcccagggaagagctgccgacagtttgggggttctct  c.112+3060

         .         .         .         .         .         .  g.8265
gttcttaggtccatcagcaaccccattgctcccctctgcttccttctgcacggagactga  c.112+3120

           g.8274
cgccatgca  c.112+3129

--------------------- middle of intron ---------------------
                                       g.8275                 g.8283
                                       c.113-3129  ggtcttcaa  c.113-3121

.         .         .         .         .         .           g.8343
ttgtcaatggtctgtccctgctgctcatactgggggttcctggggagccagtgccaggta  c.113-3061

.         .         .         .         .         .           g.8403
tcgggattgcagacattgtctgtgggtttccagaagctccttgtgttaggaacatatggg  c.113-3001

.         .         .         .         .         .           g.8463
gcccgtgcacagagggcagcagaggccttgtgggatccagctgtgctaggggtgagattt  c.113-2941

.         .         .         .         .         .           g.8523
atctgtctctcctggccatagccaggaaatccccatttttcttaagctagcttgagttgg  c.113-2881

.         .         .         .         .         .           g.8583
gcttttctaacacacagctaaagaatctcttgataaaccttgggactctccatgaggcct  c.113-2821

.         .         .         .         .         .           g.8643
tatatggcagcaggtctgtggcttgcaatcccttcaagtaatctgccaaaaacaatgtta  c.113-2761

.         .         .         .         .         .           g.8703
tgacgaaggtccttccaacacaaaaggtgtagagccctagcaaactcctacagaagaaaa  c.113-2701

.         .         .         .         .         .           g.8763
aggagaaataattcgtttgtagtcccagctacttgggaggccaaggtgggaggatcactt  c.113-2641

.         .         .         .         .         .           g.8823
gaagtcaggagttcgagaccagcctaggcaacatagccagaccccatctctacagaaata  c.113-2581

.         .         .         .         .         .           g.8883
aaaaaaattgccattgtggtaatgcacggcttgtagtcccagatactcgagaggctgagg  c.113-2521

.         .         .         .         .         .           g.8943
caggaggatcgcttgagcccaggaggatcgcttgagcccaggagttccacgttgcagtga  c.113-2461

.         .         .         .         .         .           g.9003
gctatgattgtgccactgtactccagcctgggtgccagagccaggctctatctctatttg  c.113-2401

.         .         .         .         .         .           g.9063
gtgttgttgttgttgctgttgttgtttttgagacggagtcttgttctgtcaccccggctg  c.113-2341

.         .         .         .         .         .           g.9123
gagtgcagtggcgtgatctcagctcaccgcaacctctgcctcctgggttcaagtgattct  c.113-2281

.         .         .         .         .         .           g.9183
cccgcctcagcctcctgagtagctgggactacaggcgcccaccaccatacctagctaatt  c.113-2221

.         .         .         .         .         .           g.9243
tttttttcttttgtatttttagtagagacggggtttcaccatggccaggctggttttgaa  c.113-2161

.         .         .         .         .         .           g.9303
ctcctgacctcaagtgatccaccccctcggcctcccaaagtgctgggattacaggcgtga  c.113-2101

.         .         .         .         .         .           g.9363
gccaccgctcccagccgactgtatctctaaatatataataatcataatcataatcaggac  c.113-2041

.         .         .         .         .         .           g.9423
agccgtcatattggattagggcccaccctaatgacctcatttaaacttggtcatttctgt  c.113-1981

.         .         .         .         .         .           g.9483
aaagaccctatctccgaaaacggtcacattctgaggtattggggttaggactccaacata  c.113-1921

.         .         .         .         .         .           g.9543
tgaatttgggtggggacacaattcaactcataacacattcattgattaatttcctcattc  c.113-1861

.         .         .         .         .         .           g.9603
atttattttctgagcatctattgtgtgctggacactctgtgaggatgaatgagtcaaagt  c.113-1801

.         .         .         .         .         .           g.9663
ctctggtgagaaagacaagacttgtacttgtgtctcagtactggctgctataagaaatta  c.113-1741

.         .         .         .         .         .           g.9723
ccaggctgtggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgag  c.113-1681

.         .         .         .         .         .           g.9783
gcaggcggatcacgaggtcaggagattgagatcatcctagctaacatggtgaagccccgt  c.113-1621

.         .         .         .         .         .           g.9843
ctctactaaaaatagaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagcta  c.113-1561

.         .         .         .         .         .           g.9903
ctcaggaggctgaagcgggagaatggcgtgaacctgggaggcggagcttgcagtgagccg  c.113-1501

.         .         .         .         .         .           g.9963
agatcgtgccactgcactccagcctgggtgacagagcaagactccgtctcaaaaaaaaag  c.113-1441

.         .         .         .         .         .           g.10023
aaaaaaaaaagaaaagaaaaataaattaccaggctgtgcatggtggctcatgcctgcaat  c.113-1381

.         .         .         .         .         .           g.10083
cccagtactttgggaggacaaggcaggaggatctcttgaggtcaggagtttgagaccagc  c.113-1321

.         .         .         .         .         .           g.10143
ctggtcaacatggtgaaaccccatgtctactaaaagcacaaaaattagctgggtgtggtg  c.113-1261

.         .         .         .         .         .           g.10203
gtgggtgcctgtaaatcccagctactactccggagctgaggcaggagaattgcttgaacc  c.113-1201

.         .         .         .         .         .           g.10263
caggaggcggaggttgcagtgacccgagatcacatcactgcactccagcctgggtgacag  c.113-1141

.         .         .         .         .         .           g.10323
agcaagactttgtcccaaaaaaaaaaaaaagaaaagaaagaaaggaaaagaataaaagag  c.113-1081

.         .         .         .         .         .           g.10383
aaattaccatagattgggtggcttttaaatgataaatttatttctcacagctctggaggc  c.113-1021

.         .         .         .         .         .           g.10443
tggaagtcagggtgctagcgtggtgggctctggcgaggaccctcttcctgactgcagatt  c.113-961

.         .         .         .         .         .           g.10503
gccaacaactcattgtatcctcacatggaagaaagagagctagagagcactctagggact  c.113-901

.         .         .         .         .         .           g.10563
ctttttcttgtttgttttaattaaaaaaaaattttttttacatgggcatgccatgttgcc  c.113-841

.         .         .         .         .         .           g.10623
caggttggatttgaactcctgggctcaagcaaccctccagcctcagcctcccaaagtgct  c.113-781

.         .         .         .         .         .           g.10683
gggattacaggcatgagccaccattcccagctaatttgggctgttcccaaaggctcaagt  c.113-721

.         .         .         .         .         .           g.10743
gatcctcccacgttggcctcctgagtagctggggctacaggcgtgagccaccatgcccag  c.113-661

.         .         .         .         .         .           g.10803
cttctaggacctcttttataagggcactaatcccattcatgagggccccactcactctgc  c.113-601

.         .         .         .         .         .           g.10863
acacatgacctaaatgacctgccaaaggccccacctcctaataccatcaccttgggggtt  c.113-541

.         .         .         .         .         .           g.10923
gggatttcaacacagaaatttatggggggcacgtacattcagatcatcatgaacagtaac  c.113-481

.         .         .         .         .         .           g.10983
tcctatgtgtgacagaaggtgacagaggtgggtagtggtcttcccctcaagggggtgagt  c.113-421

.         .         .         .         .         .           g.11043
tgccactagctggggaatcttctggaaggcaaatgcatatgagctgggctttacaggagg  c.113-361

.         .         .         .         .         .           g.11103
caagcgtttctctatggaagggcagaggactgtgggaggtaggaggtggggctggggcaa  c.113-301

.         .         .         .         .         .           g.11163
agggaagaggggagcagggaagtggggtgactgcacactgggagtggggaatcagatgga  c.113-241

.         .         .         .         .         .           g.11223
ggagacgatgaggagttctgttaagttcaagatgccagtgccagtgaccagcgggcgatg  c.113-181

.         .         .         .         .         .           g.11283
gtctctggcttgagggacaggatggaggggagactgtctgaggatggacaaagctggagg  c.113-121

.         .         .         .         .         .           g.11343
gaaacagccaattgcaaaggcaggagggcggaagggggaggggagaggtgggatcagcac  c.113-61

.         .         .         .         .         .           g.11403
tggtatagacaggcggtgctgcagcccagctcctctctctcctctgcctcctgccctcag  c.113-1


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