opsin 1 (cone pigments), medium-wave-sensitive (OPN1MW) - 4980 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5254
gtgagccagcaggcccgtggaggctgggtggctgcactgggggccaccggccacccacct  c.112+60

         .         .         .         .         .         .  g.5314
gccccgcccaagggaatctctcttctgcacgtccccaccagcagagaaggctttctccca  c.112+120

         .         .         .         .         .         .  g.5374
tagcttttctgatgacatgaattggggggtcctctccaaatctagaaggacaccataata  c.112+180

         .         .         .         .         .         .  g.5434
tcgaatatgcattctcaagccacacaggcttcccagcccctttgagaatccgaggccggg  c.112+240

         .         .         .         .         .         .  g.5494
gaagagtttatgtgctctttctttgtggcccgtagatgagtgtgttcactgctagcgaat  c.112+300

         .         .         .         .         .         .  g.5554
gacctctcattccacggagtccctcagcttcctggggaagagctgggtctgtctttacat  c.112+360

         .         .         .         .         .         .  g.5614
ttgaagccgaaaggaggcaacatactgacacacccaagggaggcgggagggtggggaaga  c.112+420

         .         .         .         .         .         .  g.5674
cagcagcagagggcaagaaacttctagaacttcagggtcggcaaagcctgtagcagtcat  c.112+480

         .         .         .         .         .         .  g.5734
tttgtcaaactccatgatggggccacttggcttttggctgcacacctctgggggaagagg  c.112+540

         .         .         .         .         .         .  g.5794
ctgcattggcgcccagggccatctttccattcggagccgtcctgggagagagggctcagg  c.112+600

         .         .         .         .         .         .  g.5854
cccaacagaaagctgaaagctctcatcagggcagcccgagtcctgccattgggagttgcc  c.112+660

         .         .         .         .         .         .  g.5914
caatccgaaagttttgcacgcaggccctcaaagaagctgaagacaccagtgaccgcccca  c.112+720

         .         .         .         .         .         .  g.5974
ctcctggccctctccccaggtccctcctccaaaccaaattcctttggtgccttcaagaac  c.112+780

         .         .         .         .         .         .  g.6034
atcgtgcaggccgggcacagtggctcacgcctgtaatcccagcactttgggaggcagagg  c.112+840

         .         .         .         .         .         .  g.6094
cgggcagatgacgaggtcaacagatagagatcatcctggccaacatactgaaacctcatg  c.112+900

         .         .         .         .         .         .  g.6154
tctactaaaaatgcaaaaattagctgggcttggtggcgcatgcctgtagtcccagctact  c.112+960

         .         .         .         .         .         .  g.6214
caggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgag  c.112+1020

         .         .         .         .         .         .  g.6274
atcacgccactatgctccagcctggccacagagtgagactcttgtctcaaaacaaaacaa  c.112+1080

         .         .         .         .         .         .  g.6334
aacaaaaaacaacaacatcgtgcaggctgtggtttccagaagccacgccagctccttgat  c.112+1140

         .         .         .         .         .         .  g.6394
tgccaataaacatcccgctgtggggtggccaggaccgagtgccaattagtgacagagtgc  c.112+1200

         .         .         .         .         .         .  g.6454
ccagaccaaaccggatgaggatcttgcagttgacctcaacatgactgtgcccagaatttc  c.112+1260

         .         .         .         .         .         .  g.6514
cttggtggcaatgtcaacagtctcttcctagatgcccccagacttcatcaatgcatgatg  c.112+1320

         .         .         .         .         .         .  g.6574
cttcagtgcactcttttcaaatgtcggggtgggtttttttttttttccacaaaacttcaa  c.112+1380

         .         .         .         .         .         .  g.6634
gcatctactaaagtagagggaggagtgtaatgaactccggtacccatcactcagcttcca  c.112+1440

         .         .         .         .         .         .  g.6694
cggtttcatctcatttcatctgtgacccctccactaccctttcttcctgattcttggaag  c.112+1500

         .         .         .         .         .         .  g.6754
caaatccaagacatcacacccttccctctgtaaatctttactatgttcctctaggagaaa  c.112+1560

         .         .         .         .         .         .  g.6814
agggctcttctcaatacataaccacaagtcatcatcacaccgacaagtgtaacagtattt  c.112+1620

         .         .         .         .         .         .  g.6874
cctgaatagcttcaaatatcctagtagtgttcaaaaaatgtcatacgtattttcagtctg  c.112+1680

         .         .         .         .         .         .  g.6934
cttgaatcagggctcaaataaggtccacacattcagattgactgatatgccttttgacta  c.112+1740

         .         .         .         .         .         .  g.6994
cctttgaatctagaggttccctttctatctccctgcaatttatttgtggaagcaagcaag  c.112+1800

         .         .         .         .         .         .  g.7054
tcgttcatgacgtagcctaacaggcccctctgacgttgttcattatgatttttctgtaaa  c.112+1860

         .         .         .         .         .         .  g.7114
ttggtagttgatctgaggatctggccagaggcaggttggatttgttggtgtgttttggca  c.112+1920

         .         .         .         .         .         .  g.7174
aggagagtgtctcttttctggggtgttggcagctactgaaactcaatgcccagaccaatt  c.112+1980

         .         .         .         .         .         .  g.7234
aaaccactggggatggaaaatgacggcattcggacaccttaccctgccttcacctattgg  c.112+2040

         .         .         .         .         .         .  g.7294
tgaccaaaaccttaacatcttcacaggtcttcttaccctgagggtatatgccactaggtt  c.112+2100

         .         .         .         .         .         .  g.7354
gtgtagtaaaccggtgtgtttccagtcccttagaatagtccctctctaagtgatatgcca  c.112+2160

         .         .         .         .         .         .  g.7414
ctcagtggatatgcatttagcttcatttcttttgttgctgattttcagagattgctctgt  c.112+2220

         .         .         .         .         .         .  g.7474
aaatttaaacttttattttactttattttattttttcgagacagtcttactctgtcgccc  c.112+2280

         .         .         .         .         .         .  g.7534
aggctggagtgcagtggcgcgatctcagctcactgcaacttccgcctcctcggttcgagc  c.112+2340

         .         .         .         .         .         .  g.7594
gattctcctgcctcagcctcccgaggagctgggactacaggtgcccgccaccacgcccag  c.112+2400

         .         .         .         .         .         .  g.7654
ctaattttttttatttttagtagagacagggtttcaccatgttggccaggctggtctcca  c.112+2460

         .         .         .  g.7684
actgctgacctcaagtcgtccgcccacctc  c.112+2490

--------------------- middle of intron ---------------------
                  g.7685      .         .         .           g.7714
                  c.113-2490  ggcttcccaaagtgctgggattacaggtgt  c.113-2461

.         .         .         .         .         .           g.7774
gagccaccgcccccggccacttaaattttgttttataattatgtaataaaacagttaaaa  c.113-2401

.         .         .         .         .         .           g.7834
gtctcaaattaaaatctagaaaagaaggtgtatttgaagaagtctggcttctctgcgcca  c.113-2341

.         .         .         .         .         .           g.7894
ccaccgaccgccccttccctacctgcctgtatttcctcgaatcactttgcctgggagctg  c.113-2281

.         .         .         .         .         .           g.7954
actttgattctcttgctcattgcttcatgaaattcagttccagaactttcaggagggagg  c.113-2221

.         .         .         .         .         .           g.8014
ggtaggccatgacaccagctctagttacactggtggcagctcctgtcccctcccccactg  c.113-2161

.         .         .         .         .         .           g.8074
ctgctgggacctgttctctcctttgcccccttgtccctgcactgcccaatttggaccgca  c.113-2101

.         .         .         .         .         .           g.8134
agggttgccagggaagggcactggctgccttgttttcagaggtcgtagcacctagattgc  c.113-2041

.         .         .         .         .         .           g.8194
tccagccccttgcacttgcctgcaggccagagtgtcccaaaccctcccagtctcagctgc  c.113-1981

.         .         .         .         .         .           g.8254
tcttccccagttcacccaaggtacttcccagggaagagctgccgacagtttgggggttct  c.113-1921

.         .         .         .         .         .           g.8314
ctgttcttaggtccatcagcaaccccattgctcccctctgcttccttctgcacggagact  c.113-1861

.         .         .         .         .         .           g.8374
gacgccatgcaggtcttcaattgtcaatggtctgtccctgctgctcatactgggggttcc  c.113-1801

.         .         .         .         .         .           g.8434
tggggagccagtgccaggtatcgggattgcagacattgtctgtgggtttccagaagctcc  c.113-1741

.         .         .         .         .         .           g.8494
ttgtgttaggaacatatggggcccgtgcacagagggcagcagaggccttgtgggatccag  c.113-1681

.         .         .         .         .         .           g.8554
ctgtgctaggggtgagatttatctgtctctcctggccatagccaggaaatccccattttt  c.113-1621

.         .         .         .         .         .           g.8614
cttaagctagcttgagttgggcttttctaacacacagctaaagaatctcttgataaacct  c.113-1561

.         .         .         .         .         .           g.8674
tgggactctccatgaggccttatatggcagcaggtctgtggcttgcaatcccttcaagta  c.113-1501

.         .         .         .         .         .           g.8734
atctgccaaaaacaatgttatgacgaaggtccttccaacacaaaaggtgtagagccctag  c.113-1441

.         .         .         .         .         .           g.8794
caaactcctacagaagaaaaaggagaaataattcgtttgtagtcccagctacttgggagg  c.113-1381

.         .         .         .         .         .           g.8854
ccaaggtgggaggatcacttgaagtcaggagttcgagaccagcctaggcaacatagccag  c.113-1321

.         .         .         .         .         .           g.8914
accccatctctacagaaataaaaaaaattgccattgtggtaatgcacggcttgtagtccc  c.113-1261

.         .         .         .         .         .           g.8974
aggtactcgagaggctgaggcaggaggatcgcttgagcccaggaggatcgcttgagccca  c.113-1201

.         .         .         .         .         .           g.9034
ggagttccacgttgcagtgagctatgattgtgccactgtactccagcctgggtgacagag  c.113-1141

.         .         .         .         .         .           g.9094
caagactttgtcccaaaaaaaaaaaaaaaagaaaagaaagaaaggaaaagaataaaagag  c.113-1081

.         .         .         .         .         .           g.9154
aaattaccatagattgggtggcttttaaatgataaatttatttctcacagctctggaggc  c.113-1021

.         .         .         .         .         .           g.9214
tggaagtcagggtgctagcgtggtgggctctggcgaggaccctcttcctgactgcagatt  c.113-961

.         .         .         .         .         .           g.9274
gccaacaactcattgtatcctcacatggaagaaagagagctagagagcactctagggact  c.113-901

.         .         .         .         .         .           g.9334
ctttttcttgtttgttttaattaaaaaaaaattttttttacatgggcatgccatgttgcc  c.113-841

.         .         .         .         .         .           g.9394
caggttggatttgaactcctgggctcaagcaaccctccagcctcagcctcccaaagtgct  c.113-781

.         .         .         .         .         .           g.9454
gggattacaggcatgagccaccattcccagctaatttgggctgttcccaaaggctcaagt  c.113-721

.         .         .         .         .         .           g.9514
gatcctcccacgttggcctcctgagtagctggggctacaggcgtgagccaccatgcccag  c.113-661

.         .         .         .         .         .           g.9574
cttctaggacctcttttataagggcactaatcccattcatgagggccccactcactctgc  c.113-601

.         .         .         .         .         .           g.9634
acacatgacctaaatgacctgccaaaggccccacctcctaataccatcaccttgggggtt  c.113-541

.         .         .         .         .         .           g.9694
gggatttcaacacagaaatttatggggggcacgtacattcagatcatcatgaacagtaac  c.113-481

.         .         .         .         .         .           g.9754
tcctatgtgtgacagaaggtgacagaggtgggtagtggtcttcccctcaagggggtgagt  c.113-421

.         .         .         .         .         .           g.9814
tgccactagctggggaatcttctggaaggcaaatgcatatgagctgggctttacaggagg  c.113-361

.         .         .         .         .         .           g.9874
caagcgtttctctatggaagggcagaggactgtgggaggtaggaggtggggctggggcaa  c.113-301

.         .         .         .         .         .           g.9934
agggaagaggggagcagggaagtggggtgactgcacactgggagtggggaatcagatgga  c.113-241

.         .         .         .         .         .           g.9994
ggagacgatgaggagttctgttaagttcaagatgccagtgccagtgaccagcgggcgatg  c.113-181

.         .         .         .         .         .           g.10054
gtctctggcttgagggacaggatggaggggagactgtctgaggatggacaaagctggagg  c.113-121

.         .         .         .         .         .           g.10114
gaaacagccaattgcaaaggcaggagggcggaagggggaggggagaggtgggatcagcac  c.113-61

.         .         .         .         .         .           g.10174
tggtatagacaggcggtgctgcagcccagctcctctctctcctctgcctcctgccctcag  c.113-1


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