opsin 1 (cone pigments), medium-wave-sensitive (OPN1MW) - upstream reference sequence


          g.1       .         .         .         .             g.42
          c.-5082 tggcgggaagcaaatttgtactacagccaccttagaaaacca    c.-5041

.         .         .         .         .         .             g.102
cttgacagtatcacaaagttgaagatatacctaccaaatgatccagcaactgcattcata    c.-4981

.         .         .         .         .         .             g.162
ggcgatattcccaggaggcaagtacactgatgttctcaatatccaacaactagcaacaaa    c.-4921

.         .         .         .         .         .             g.222
ccacctgcccagaaagtgtaagtaaactgtaatatatgcaacaacatactactgtacagc    c.-4861

.         .         .         .         .         .             g.282
aatgagaatgaactacagccttgaaaaacatgaatgcatttcacaagcataatgttgaac    c.-4801

.         .         .         .         .         .             g.342
aaaagaaaccagacagaaaatccatactatatatggttccatttacataaattccaagag    c.-4741

.         .         .         .         .         .             g.402
caggcaaaactaaacaatattgtgtagggatgactacacaggcaggaaagctaaagagca    c.-4681

.         .         .         .         .         .             g.462
gcatggatgttggcaacagaaaccccaggatggtggttcccactagagcgggagaagggg    c.-4621

.         .         .         .         .         .             g.522
attatgactggggtgactgtggaggctggggtgcctggcctgagtagtggttaaatgtgt    c.-4561

.         .         .         .         .         .             g.582
gttcaccttatcgttacttcttaaaacatacatcaatgttttctgcacctttatatacat    c.-4501

.         .         .         .         .         .             g.642
atgccagatttcacagttttcaaactatttaaatgttcaatataggccaggtgtggtggc    c.-4441

.         .         .         .         .         .             g.702
tcatgcctgtaatcccagcactttgggaggctgaggcgggcggaggtcaggaggtcaaga    c.-4381

.         .         .         .         .         .             g.762
ccagtctggccaacatggtgaaaccccgtctatacaaaatacaaaaaaaaaaaaaaaaat    c.-4321

.         .         .         .         .         .             g.822
gcctggcacagtggttcacacctgtacttccagcactttgggaggccgaggcgggcggat    c.-4261

.         .         .         .         .         .             g.882
cacctgaggtcgggagttcaagaccagcctgaccaacacagagaaaccccatctctacta    c.-4201

.         .         .         .         .         .             g.942
gaaatacaaaattagccaggcgtggtggcacacgcctgtagtcccagctactcgggaggc    c.-4141

.         .         .         .         .         .             g.1002
tgaggcaggagaaccgcttgaacccggggtgcagaagttgcagtgagctgagatcgtgcc    c.-4081

.         .         .         .         .         .             g.1062
actgcactccagcctgggtggtagagtgagactccgtctcaaaaaataaataaataataa    c.-4021

.         .         .         .         .         .             g.1122
ataataatatgttcaattgatggatttaatggcagatttgatatggctggagagactgtt    c.-3961

.         .         .         .         .         .             g.1182
ggtaaattgtacagaggagctaaagaaagtatccaggccgggcgcggtggctcacacgcc    c.-3901

.         .         .         .         .         .             g.1242
tgtaatcccagcattttgggaggccaaggcgggtggatcacctgacgtcaggagtttgag    c.-3841

.         .         .         .         .         .             g.1302
gctaacctgaccaacatggtgaaaccctgtctctactaaaaaatacaaaaaattaactgg    c.-3781

.         .         .         .         .         .             g.1362
gcatggtggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaatggctt    c.-3721

.         .         .         .         .         .             g.1422
gaacccaggaggcagaggttgcagtgagccgagatcacgccactgcactccaacctgggc    c.-3661

.         .         .         .         .         .             g.1482
aacaagagcaaaactccatcccaagaaagaaagagagagagagagagagagagagagaga    c.-3601

.         .         .         .         .         .             g.1542
gaaagagaaaagaaagaaagaaaaaaaagtatccagaatgcagcacagaggcacaaaaaa    c.-3541

.         .         .         .         .         .             g.1602
atagaaaacttgaaaaatagaagacatggaaggtagcatgagtaggtctaacaaaaatcc    c.-3481

.         .         .         .         .         .             g.1662
aattgtcacaccagagagagaagacagacagaatgaagcagcagcaatatatacatattt    c.-3421

.         .         .         .         .         .             g.1722
ttcttcttttttttttaaattgaaatggagtcacactctgttgcataggcggagtgccgt    c.-3361

.         .         .         .         .         .             g.1782
ggcacaatctcggctcacggccgacctctgctgcccgggttcaagcacttctcgtgcctc    c.-3301

.         .         .         .         .         .             g.1842
agcctcccgagtagctgggactacaggcgcgtgccatcacagctagctaattcttttgta    c.-3241

.         .         .         .         .         .             g.1902
tttttagtagagatggggtttcatcatgttggcaagactgttctcgaactctcaacatca    c.-3181

.         .         .         .         .         .             g.1962
ggtgacccacccacctcggcctcccaaagtgctgggattacaggcatgagccactacgac    c.-3121

.         .         .         .         .         .             g.2022
cggccacagcagcaacattttaagagataactccctaagaactttccagaactgaagaaa    c.-3061

.         .         .         .         .         .             g.2082
gacacaaattcacaaattcaagaagcccaataaatcctaagcagggaagacagaaatagg    c.-3001

.         .         .         .         .         .             g.2142
tccacacctagacacgagattttttttttttttttttttttgaaacagtgtttcgctctt    c.-2941

.         .         .         .         .         .             g.2202
gtcgcccaggctggagtacagtggcgtgatctcggctcactgcaacctctgcctcccggg    c.-2881

.         .         .         .         .         .             g.2262
ttcaagcgattctcctgcgtcagcctcccaagtagctggtactacaggcgcccgccacca    c.-2821

.         .         .         .         .         .             g.2322
tgcccagctaatttttgtatttttagtagagacagtgtttcaccatgttggccaggctgg    c.-2761

.         .         .         .         .         .             g.2382
tctggaactcctgacctcaaatgatccgcccacctgggcctcccaaagtgctgggattac    c.-2701

.         .         .         .         .         .             g.2442
aagcatgagccaccgcccgcggccgacacaagatgttaaaagcagccagaggaaaaaaag    c.-2641

.         .         .         .         .         .             g.2502
ctgattacctttaaaaccatgacttttagacggcaggctgccttctcaatagcatcaatg    c.-2581

.         .         .         .         .         .             g.2562
caatccagaagatagttgactgatatcttcgatacactgagagaataactgtcagagaga    c.-2521

.         .         .         .         .         .             g.2622
aaaaaataggtcacattcaaagaatcagaagtcagaatggcttcagacttcagcaacagc    c.-2461

.         .         .         .         .         .             g.2682
atggggaactagaagacaatgaagtgctggccgggcacggtggctcacacctgtaatctc    c.-2401

.         .         .         .         .         .             g.2742
agcactctgggaagcccaggcaggcggatcacttgaagtcaagagtttgagaccaggctg    c.-2341

.         .         .         .         .         .             g.2802
gccaacatgaggaaactctgtctctactaaaaatacaaaaattagccagcattgtggtgg    c.-2281

.         .         .         .         .         .             g.2862
gcgcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgaacccaagagg    c.-2221

.         .         .         .         .         .             g.2922
ttgcagtgagccgaggatcactcccctgtactccagcctgggcgacagagcaagactctg    c.-2161

.         .         .         .         .         .             g.2982
tcccaaaaaaaaaaaaaaaaaaaaaaaaaaaagacaatgaagtgctgctttcgaaattct    c.-2101

.         .         .         .         .         .             g.3042
gagggaaaaatgatttcccagcctaaaattctacaccccaactgtcaactgtggggttag    c.-2041

.         .         .         .         .         .             g.3102
actaaagacatttttagacatgaaggagttcagtacaccactgacaaatgtaagaattca    c.-1981

.         .         .         .         .         .             g.3162
acaactgtttaaaaagcaagtcttgccagggcagtggtgtgcacctgtggtcccagctac    c.-1921

.         .         .         .         .         .             g.3222
tcaggatgctgaggcaggaggattacttgtgcccagcaagtagaggctgcagtgacctgt    c.-1861

.         .         .         .         .         .             g.3282
gactgtgctactgccctccaacctgggtgacagagtgagaccttgtctcaaaaaaaaaag    c.-1801

.         .         .         .         .         .             g.3342
agcgggggggggggggccgggccgggcgtggtggctcacagctgtaatcccagcactttg    c.-1741

.         .         .         .         .         .             g.3402
ggaagccaaggcgggtggatcacttgaggtcaggagtttgagaccatcatggtcaacact    c.-1681

.         .         .         .         .         .             g.3462
gcgaaacactgtccctactaaaaatacaaaaattagccgggcatggtggcacacacctgt    c.-1621

.         .         .         .         .         .             g.3522
aatcccagctactggggaggctgaggcaggagaattgcttgagccggggagacggaggtt    c.-1561

.         .         .         .         .         .             g.3582
gcagtgagccgagactgcgccactgcactccagcctgactgacaagagtgagattgtctc    c.-1501

.         .         .         .         .         .             g.3642
aaaaaaaaaaaaaaagtaatcactagaaaagaagctacatatgtacataacatccaaata    c.-1441

.         .         .         .         .         .             g.3702
accaagaggagaaaaaaatgggacttgattaatcaaaacaaaaacaaaaaagaaagaaag    c.-1381

.         .         .         .         .         .             g.3762
aaagggggagaaaataaaacaagggctgggtgtgctggctcatgcctgtaatcccagcac    c.-1321

.         .         .         .         .         .             g.3822
tttggaagccaaggtgggtggatctcttgagctcaggaggtcaagaccagcctgggcaac    c.-1261

.         .         .         .         .         .             g.3882
atggcgaaaccccgtctctattaaaaaaaaaattaatacaacaattatcctggagtggtg    c.-1201

.         .         .         .         .         .             g.3942
gtacacacctgtagtcccagctacccaggacgctgagacgggaggatcgcttgatcccgg    c.-1141

.         .         .         .         .         .             g.4002
ggatgtcgaggctgccgtgatcgcaccactgccctccagccagggtggcagactgagacc    c.-1081

.         .         .         .         .         .             g.4062
ccatctcaaaaaataaataaataaaagcaaacaagaaaaaaaaaggcttgaaacatatct    c.-1021

.         .         .         .         .         .             g.4122
gatagataaagggctaatcaacacaatatataaagaactgcaaatcagtaaactaagagc    c.-961

.         .         .         .         .         .             g.4182
aaataacccaatataaagacattaaagggtagccacggacatctcagacgacgaaaaaca    c.-901

.         .         .         .         .         .             g.4242
aaagacagtaaacgtataataaaacatgtaattgcaaggtgatccgggaatagtaagcga    c.-841

.         .         .         .         .         .             g.4302
aaagcaacaattaaatactattttctcatccaccagaacgccaaaaattaaaaagcctaa    c.-781

.         .         .         .         .         .             g.4362
caatgtccagggctggcgagaatgtggcagaaggtgatgtcacataccctgcaagtggga    c.-721

.         .         .         .         .         .             g.4422
atctaaacagattcagggttttggtttttttttaatcgcaattaggtggcctgttaaatt    c.-661

.         .         .         .         .         .             g.4482
ttttttcttgagacagagttttgctcttgttgcccaggctggagtgcaatggctcgatct    c.-601

.         .         .         .         .         .             g.4542
tggctcaccgcaacctcgacctcccaggtacaagcgattctcctgtctcagcctcccaag    c.-541

.         .         .         .         .         .             g.4602
tagctgggagtacaggtatttgccactaagcccagctaattgttttttatttagtagaaa    c.-481

.         .         .         .         .         .             g.4662
cggggtttcaccatgttagtcaggctggtcgggaactcctgacctcaggagatctacccg    c.-421

.         .         .         .         .         .             g.4722
ccttggcctcccaaagtgctgggattacaggcgtgtgccactgtgcccagccactttttt    c.-361

.         .         .         .         .         .             g.4782
ttagacagagtcttggtctgttgcccaggctagagttcagtggcgccatctcagctcact    c.-301

.         .         .         .         .         .             g.4842
gcaacctccgcctcccagattcaagcgattctcctgcctcgacctcccagtagctgggat    c.-241

.         .         .         .         .         .             g.4902
tacaggtttccagcaaatccctctgagccgcccccgggggctcgcctcaggagcaaggaa    c.-181

.         .         .         .         .         .             g.4962
gcaaggggtgggaggaggaggtctaagtcccaggcccaattaagagatcagatggtgtag    c.-121

.         .         .         .            .         .          g.5022
gatttgggagcttttaaggtgaagaggcccgggctgat \ cccactggccggtataaagcac c.-61


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