otogelin (OTOG) - coding DNA reference sequence

(used for variant description)

(last modified January 9, 2016)


This file was created to facilitate the description of sequence variants on transcript XM_291816.8 in the OTOG gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_033191.1, covering OTOG transcript XM_291816.8.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
          .         .         .         .         .         .       g.60
 ATGGGAGTCCTGGCGTCTGCGCTCTGCTGGCTGCTTTGTGTCTGGCTGCCCTGGGGTGAG       c.60
 M  G  V  L  A  S  A  L  C  W  L  L  C  V  W  L  P  W  G  E         p.20

          .         .         .         .         .         .       g.120
 CAGGCAGCCGAGTCCCTGCGGGTGCAGCGCCTCGGTGAGAGGGTTGTGGACTCAGGGAGG       c.120
 Q  A  A  E  S  L  R  V  Q  R  L  G  E  R  V  V  D  S  G  R         p.40

          .         .         .         .         .     | 02   .    g.768
 TCGGGGGCTCGAGGAATGAGAAACGTTAAAGGAATGAGGAATGGGCCCGCGCAG | ACTCGT    c.180
 S  G  A  R  G  M  R  N  V  K  G  M  R  N  G  P  A  Q   | T  R      p.60

          .         .         .         .         .         .       g.828
 GTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACAAGGCTACAGTC       c.240
 V  S  S  S  S  S  H  Q  E  A  T  L  A  M  G  D  K  A  T  V         p.80

          .   | 03     .         .         .         .         .    g.4675
 GTGGGAGGCCAG | CAGGCTGAAGCCCCAGACTCCGTGGCCATGTCTTCCTGGGAAAGGCGG    c.300
 V  G  G  Q   | Q  A  E  A  P  D  S  V  A  M  S  S  W  E  R  R      p.100

          .         .         | 04         .         .         .    g.5778
 CTCCATCGGGCCAAGTGTGCACCATCCT | ACTTGTTCTCCTGCTTCAATGGAGGCGAGTGT    c.360
 L  H  R  A  K  C  A  P  S  Y |   L  F  S  C  F  N  G  G  E  C      p.120

          .         .         .         .         .         .       g.5838
 GTGCACCCAGCCTTCTGTGACTGCAGACGCTTCAATGCCACTGGACCGCGCTGCCAGATG       c.420
 V  H  P  A  F  C  D  C  R  R  F  N  A  T  G  P  R  C  Q  M         p.140

   | 05      .         .         .         .         .         .    g.6051
 G | TGTACAATGCCGGCCCTGAGAGGGACAGCATTTGCCGGGCGTGGGGGCAGCACCACGTG    c.480
 V |   Y  N  A  G  P  E  R  D  S  I  C  R  A  W  G  Q  H  H  V      p.160

          .         .         .         .         .         .       g.6111
 GAGACATTTGATGGGCTCTACTACTACCTCTCCGGAAAGGGCAGCTACACCCTGGTGGGT       c.540
 E  T  F  D  G  L  Y  Y  Y  L  S  G  K  G  S  Y  T  L  V  G         p.180

          .         .         .       | 06 .         .         .    g.8430
 CGCCATGAGCCCGAGGGACAGAGCTTCTCCATCCAG | GTACACAATGACCCGCAGTGTGGC    c.600
 R  H  E  P  E  G  Q  S  F  S  I  Q   | V  H  N  D  P  Q  C  G      p.200

          .         .         .         .         .         .       g.8490
 TCTTCACCCTACACCTGCTCCAGGGCTGTCAGCCTCTTCTTTGTGGGTGAGCAGGAGATC       c.660
 S  S  P  Y  T  C  S  R  A  V  S  L  F  F  V  G  E  Q  E  I         p.220

          .         .         .      | 07  .         .         .    g.9770
 CATCTGGCCAAGGAGGTCACCCATGGAGGCATGAG | GGTCCAACTGCCACATGTCATGGGG    c.720
 H  L  A  K  E  V  T  H  G  G  M  R  |  V  Q  L  P  H  V  M  G      p.240

          .         .         .         .         .         .       g.9830
 AGCGCGCGTCTGCAGCAGCTTGCCGGCTATGTCATCGTGCGGCATCAGTCAGCCTTCACA       c.780
 S  A  R  L  Q  Q  L  A  G  Y  V  I  V  R  H  Q  S  A  F  T         p.260

          .         .         .         .         .         .       g.9890
 CTGGCCTGGGATGGTGCCTCGGCTGTCTACATCAAGATGAGTCCAGAGCTTCTGGGCTGG       c.840
 L  A  W  D  G  A  S  A  V  Y  I  K  M  S  P  E  L  L  G  W         p.280

          .         .         .         .         .         .       g.9950
 ACCCATGGGCTGTGTGGGAACAACAATGCTGACCCCAAGGATGATCTGGTGACCAGCTCT       c.900
 T  H  G  L  C  G  N  N  N  A  D  P  K  D  D  L  V  T  S  S         p.300

   | 08      .         .         .         .         .         .    g.10871
 G | GGAAGCTGACTGACGACGTGGTTGAGTTTGTGCACAGCTGGCAGGAGCAGGCCCCTAAC    c.960
 G |   K  L  T  D  D  V  V  E  F  V  H  S  W  Q  E  Q  A  P  N      p.320

          .         .         .         .         .         .       g.10931
 CAGCCTCCAGGGCCCACAACTTCCTCCCTGCCTCGCCCACCGTGCCTACAGCAGAACCCA       c.1020
 Q  P  P  G  P  T  T  S  S  L  P  R  P  P  C  L  Q  Q  N  P         p.340

          .   | 09     .         .         .         .         .    g.11213
 GGAACCATGCAG | GGCGTGTACGAGCAGTGTGAGGCTCTACTGCGGCCCCCCTTTGACGCC    c.1080
 G  T  M  Q   | G  V  Y  E  Q  C  E  A  L  L  R  P  P  F  D  A      p.360

          .         .         .         .         .          | 10    g.11680
 TGCCACGCCTACGTCAGCCCTCTGCCCTTCACAGCCAGTTGTACCAGTGATCTCTGCCA | A    c.1140
 C  H  A  Y  V  S  P  L  P  F  T  A  S  C  T  S  D  L  C  Q  |      p.380

          .         .         .         .         .         .       g.11740
 TCAATGGGTGATGTAGCCACCTGGTGCCGGGCACTGGCGGAGTATGCCCGGGCGTGTGCC       c.1200
 S  M  G  D  V  A  T  W  C  R  A  L  A  E  Y  A  R  A  C  A         p.400

          .         .         .         .          | 11        .    g.12172
 CAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCA | CTGTGCACTGC    c.1260
 Q  A  G  R  P  L  Q  G  W  R  T  Q  L  R  Q  C  T |   V  H  C      p.420

          .         .         .         .         .         .       g.12232
 AAGGAGAAGGCCTTTACCTACAATGAGTGCATCGCCTGCTGCCCTGCCTCCTGCCATCCC       c.1320
 K  E  K  A  F  T  Y  N  E  C  I  A  C  C  P  A  S  C  H  P         p.440

          .         .         .         .         .         | 12    g.13338
 CGGGCATCCTGTGTGGACAGTGAGATCGCCTGTGTGGACGGCTGCTATTGCCCCAATG | GG    c.1380
 R  A  S  C  V  D  S  E  I  A  C  V  D  G  C  Y  C  P  N  G |       p.460

          .         .         .         .         .         .       g.13398
 CTCATCTTCGAGGATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGTGAGTTTCACGGG       c.1440
 L  I  F  E  D  G  G  C  V  A  P  A  E  C  P  C  E  F  H  G         p.480

          .         .         .         .        | 13.         .    g.13731
 ACTCTGTACCCACCTGGCTCTGTGGTGAAGGAAGACTGCAATACTTG | CACATGCACCTCA    c.1500
 T  L  Y  P  P  G  S  V  V  K  E  D  C  N  T  C  |  T  C  T  S      p.500

          .         .         .     | 14   .         .         .    g.14315
 GGCAAGTGGGAGTGCAGCACAGCTGTCTGCCCAG | CTGAGTGCTCAGTGACTGGTGACATT    c.1560
 G  K  W  E  C  S  T  A  V  C  P  A |   E  C  S  V  T  G  D  I      p.520

          .         .         .         .         .         .       g.14375
 CACTTCACAACCTTTGATGGCCGCCGGTACACGTTCCCCGCCACATGTCAGTACATCCTG       c.1620
 H  F  T  T  F  D  G  R  R  Y  T  F  P  A  T  C  Q  Y  I  L         p.540

          .         .         .         .         .         .       g.14435
 GCCAAGAGCCGCTCTTCGGGCACCTTCACCGTGACATTGCAGAATGCCCCATGTGGCCTG       c.1680
 A  K  S  R  S  S  G  T  F  T  V  T  L  Q  N  A  P  C  G  L         p.560

  | 15       .         .         .         .         .         .    g.21843
  | AACCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAGG    c.1740
  | N  Q  D  G  A  C  V  Q  S  V  S  V  I  L  H  Q  D  P  R  R      p.580

          .         .         .         .         .         .       g.21903
 CAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCG       c.1800
 Q  V  T  L  T  Q  A  G  D  V  L  L  F  D  Q  Y  K  I  I  P         p.600

          .    | 16    .         .         .         .         .    g.22887
 CCATACACAGATG | ATGCCTTTGAGATCCGTAGGCTGTCCTCCGTGTTCCTGCGGGTGAGG    c.1860
 P  Y  T  D  D |   A  F  E  I  R  R  L  S  S  V  F  L  R  V  R      p.620

          .         .         .         .         .         .       g.22947
 ACGAACGTGGGCGTGCGGGTGCTCTACGACCGTGAAGGGCTCCGACTGTACCTGCAAGTG       c.1920
 T  N  V  G  V  R  V  L  Y  D  R  E  G  L  R  L  Y  L  Q  V         p.640

          .         .         .         .         .         .       g.23007
 GACCAGCGATGGGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAG       c.1980
 D  Q  R  W  V  E  D  T  V  G  L  C  G  T  F  N  G  N  T  Q         p.660

          .  | 17      .         .         .         .         .    g.24756
 GATGACTTCCT | GTCTCCAGTGGGTGTACCTGAGAGCACCCCACAACTTTTTGGCAATTCC    c.2040
 D  D  F  L  |  S  P  V  G  V  P  E  S  T  P  Q  L  F  G  N  S      p.680

          .         .         .         .         .         .       g.24816
 TGGAAAACACTTTCTGCTTGCTCCCCGCTGGTCTCTGGCTCCCCTCTGGACCCCTGCGAT       c.2100
 W  K  T  L  S  A  C  S  P  L  V  S  G  S  P  L  D  P  C  D         p.700

          .       | 18 .         .         .         .         .    g.25749
 GTGCACCTGCAAGCCG | CCTCCTACTCAGTGCAGGCCTGCAGCGTGCTCACGGGGGAGATG    c.2160
 V  H  L  Q  A  A |   S  Y  S  V  Q  A  C  S  V  L  T  G  E  M      p.720

          .         .         .         .         .         .       g.25809
 TTTGCGCCCTGCTCTGCGTTCCTGAGCCCCGTGCCCTACTTTGAGCAGTGCCGCAGGGAT       c.2220
 F  A  P  C  S  A  F  L  S  P  V  P  Y  F  E  Q  C  R  R  D         p.740

          .         .         .         .         .         .       g.25869
 GCCTGCCGCTGCGGGCAGCCCTGCCTGTGCGCCACACTGGCCCACTACGCCCACCTGTGC       c.2280
 A  C  R  C  G  Q  P  C  L  C  A  T  L  A  H  Y  A  H  L  C         p.760

          .         .         .         .          | 19        .    g.27358
 CGGCGCCATGGGCTCCCCGTTGATTTCCGCGCCCGCCTGCCAGCCTGTG | CACTGTCCTGT    c.2340
 R  R  H  G  L  P  V  D  F  R  A  R  L  P  A  C  A |   L  S  C      p.780

          .         .         .         .         .         .       g.27418
 GAGGCCTCCAAGGAGTATAGCCCCTGCGTGGCCCCGTGTGGACGTACCTGCCAGGACCTG       c.2400
 E  A  S  K  E  Y  S  P  C  V  A  P  C  G  R  T  C  Q  D  L         p.800

          .         .         .         .         .         .       g.27478
 GCCAGCCCTGAGGCCTGTGGGGTTGATGGTGGCGATGACCTGAGCAGAGACGAGTGTGTG       c.2460
 A  S  P  E  A  C  G  V  D  G  G  D  D  L  S  R  D  E  C  V         p.820

          .         .         .         .         .         .       g.27538
 GAGGGCTGTGCCTGCCCACCGGACACCTATCTGGACACCCAGGCTGACCTCTGTGTCCCC       c.2520
 E  G  C  A  C  P  P  D  T  Y  L  D  T  Q  A  D  L  C  V  P         p.840

    | 20     .         .         .         .         .         .    g.29241
 CG | GAACCAGTGCTCCTGCCACTTCCAGGGAGTGGACTATCCCCCCGGAGACAGTGACATC    c.2580
 R  |  N  Q  C  S  C  H  F  Q  G  V  D  Y  P  P  G  D  S  D  I      p.860

          .        | 21.         .         .         .         .    g.29538
 CCATCCCTGGGCCACTG | CCACTGCAAAGATGGAGTCATGAGCTGTGATAGCAGAGCCCCA    c.2640
 P  S  L  G  H  C  |  H  C  K  D  G  V  M  S  C  D  S  R  A  P      p.880

   | 22      .         .         .         .         .         .    g.31059
 G | CTGCTGCCTGCCCAGCAGGCCAGGTCTTCGTGAACTGCAGCGACCTGCACACGGACCTG    c.2700
 A |   A  A  C  P  A  G  Q  V  F  V  N  C  S  D  L  H  T  D  L      p.900

          .         .         .         .         .         .       g.31119
 GAGCTGAGCAGGGAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAGCGTGTCAGCCCGT       c.2760
 E  L  S  R  E  R  T  C  E  Q  Q  L  L  N  L  S  V  S  A  R         p.920

          .         .         .      | 23  .         .         .    g.39126
 GGCCCCTGCCTCTCGGGCTGCGCCTGTCCCCAGGG | TCTGCTCAGACACGGGGATGCATGT    c.2820
 G  P  C  L  S  G  C  A  C  P  Q  G  |  L  L  R  H  G  D  A  C      p.940

          .         .         .         .         .         .       g.39186
 TTCCTGCCAGAGGAGTGCCCCTGCACTTGGAAGGGGAAGGAGTATTTCCCTGGGGACCAG       c.2880
 F  L  P  E  E  C  P  C  T  W  K  G  K  E  Y  F  P  G  D  Q         p.960

          .         .    | 24    .         .         .         .    g.44114
 GTGATGTCTCCTTGCCATACCTG | TGTGTGCCAGCGGGGCTCATTCCAGTGCACCCTGCAC    c.2940
 V  M  S  P  C  H  T  C  |  V  C  Q  R  G  S  F  Q  C  T  L  H      p.980

          .         .         .         .         .         .       g.44174
 CCTTGCGCCTCCACCTGCACTGCCTATGGGGACCGGCATTACCGCACGTTTGATGGGCTC       c.3000
 P  C  A  S  T  C  T  A  Y  G  D  R  H  Y  R  T  F  D  G  L         p.1000

          .         .         .         .   | 25     .         .    g.45838
 CCGTTTGACTTCGTGGGGGCATGCAAAGTGCACCTGGTCAAG | AGCACATCAGATGTCAGC    c.3060
 P  F  D  F  V  G  A  C  K  V  H  L  V  K   | S  T  S  D  V  S      p.1020

          .         .         .         .         .         .       g.45898
 TTCTCTGTGATTGTAGAGAATGTGAACTGCTACAGCTCTGGCATGATCTGCAGGAAATTT       c.3120
 F  S  V  I  V  E  N  V  N  C  Y  S  S  G  M  I  C  R  K  F         p.1040

          .         .         .         .         .        | 26.    g.46240
 ATTTCCATCAACGTTGGGAACTCACTCATTGTCTTTGATGATGACTCCGGAAATCCT | AGT    c.3180
 I  S  I  N  V  G  N  S  L  I  V  F  D  D  D  S  G  N  P   | S      p.1060

          .         .         .         .         .         .       g.46300
 CCAGAGAGCTTCCTGGATGACAAGCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACA       c.3240
 P  E  S  F  L  D  D  K  Q  E  V  H  T  W  R  V  G  F  F  T         p.1080

          .         .         .         .         .         .       g.46360
 CTGGTGCATTTCCCACAGGAGCACATCACCCTCTTGTGGGACCAGAGAACCACAGTGCAC       c.3300
 L  V  H  F  P  Q  E  H  I  T  L  L  W  D  Q  R  T  T  V  H         p.1100

          .         .     | 27   .         .         .         .    g.46710
 GTCCAGGCTGGGCCTCAGTGGCAG | GGCCAGCTGGCGGGCCTCTGTGGGAACTTTGACTTA    c.3360
 V  Q  A  G  P  Q  W  Q   | G  Q  L  A  G  L  C  G  N  F  D  L      p.1120

          .         .         .         .         .         .       g.46770
 AAAACCATCAATGAGATGAGGACCCCGGAGAACCTAGAGCTAACTAACCCCCAGGAGTTT       c.3420
 K  T  I  N  E  M  R  T  P  E  N  L  E  L  T  N  P  Q  E  F         p.1140

          .         .     | 28   .         .         .         .    g.48701
 GGCAGCAGTTGGGCTGCAGTTGAG | TGCCCAGACACCCTCGATCCTCGGGATATGTGTGTC    c.3480
 G  S  S  W  A  A  V  E   | C  P  D  T  L  D  P  R  D  M  C  V      p.1160

          .         .         .         .         .         .       g.48761
 CTGAATCCTCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCATCCTGCTCAGTGAGGTG       c.3540
 L  N  P  L  R  E  P  F  A  K  K  E  C  S  I  L  L  S  E  V         p.1180

          .         .  | 29      .         .         .         .    g.49517
 TTTGAGATCTGCCACCCTGTG | GTTGATGTCACTTGGTTTTACTCAAACTGCCTGACAGAC    c.3600
 F  E  I  C  H  P  V   | V  D  V  T  W  F  Y  S  N  C  L  T  D      p.1200

          .         .         .         .         .         .       g.49577
 ACATGTGGCTGCAGCCAGGGTGGTGACTGTGAGTGCTTCTGTGCCAGCGTCTCCGCTTAT       c.3660
 T  C  G  C  S  Q  G  G  D  C  E  C  F  C  A  S  V  S  A  Y         p.1220

          .         .         .         .         .         | 30    g.52300
 GCCCACCAGTGTTGCCAGCATGGGGTGGCTGTTGACTGGCGAACCCCCCGCCTCTGCC | CG    c.3720
 A  H  Q  C  C  Q  H  G  V  A  V  D  W  R  T  P  R  L  C  P |       p.1240

          .         .      | 31  .         .         .         .    g.54872
 TATGACTGTGACTTCTTTAACAAAG | TGCTAGGTAAGGGCCCCTATCAGCTATCCAGCTTG    c.3780
 Y  D  C  D  F  F  N  K  V |   L  G  K  G  P  Y  Q  L  S  S  L      p.1260

          .         .         .         .         .         .       g.54932
 GCAGCCGGTGGTGCTCTGGTGGGCATGAAGGCGGTGGGCGATGACATAGTCCTAGTGAGG       c.3840
 A  A  G  G  A  L  V  G  M  K  A  V  G  D  D  I  V  L  V  R         p.1280

          .         .         .         .         .         .       g.54992
 ACAGAGGATGTGGCGCCAGCAGACATTGTGAGCTTCCTGCTGACAGCTGCTCTGTACAAG       c.3900
 T  E  D  V  A  P  A  D  I  V  S  F  L  L  T  A  A  L  Y  K         p.1300

          .    | 32    .         .         .         .         .    g.58531
 GCCAAGGCCCATG | ACCCAGATGTGGTGTCCCTGGAGGCAGCAGACAGACCCAACTTCTTC    c.3960
 A  K  A  H  D |   P  D  V  V  S  L  E  A  A  D  R  P  N  F  F      p.1320

          .         .         .         .         .         .       g.58591
 CTTCACGTCACAGCCAACGGGTCTCTGGAGCTGGCTAAGTGGCAGGGCCGTGACACCTTC       c.4020
 L  H  V  T  A  N  G  S  L  E  L  A  K  W  Q  G  R  D  T  F         p.1340

          .         .         .         .         .         .       g.58651
 CAACAGCATGCCTCCTTCTTGCTGCACCGGGGGACACGGCAGGCAGGCCTGGTGGCCCTG       c.4080
 Q  Q  H  A  S  F  L  L  H  R  G  T  R  Q  A  G  L  V  A  L         p.1360

          .         .         .         .         .         .       g.58711
 GAGTCCCTGGCCAAGCCCAGCTCCTTCCTCTATGTGTCGGGCGCGGTGCTGGCCCTGCGG       c.4140
 E  S  L  A  K  P  S  S  F  L  Y  V  S  G  A  V  L  A  L  R         p.1380

          .         .         .         .         .   | 33     .    g.60931
 CTGTACGAACACACAGAGGTGTTCCGCCGGGGCACACTCTTCCGCCTTCTGG | ATGCCAAG    c.4200
 L  Y  E  H  T  E  V  F  R  R  G  T  L  F  R  L  L  D |   A  K      p.1400

          .         .         .         .         .         .       g.60991
 CCCTCGGGGGCTGCCTACCCCATCTGCGAGTGGCGCTACGATGCCTGTGCCAGCCCCTGC       c.4260
 P  S  G  A  A  Y  P  I  C  E  W  R  Y  D  A  C  A  S  P  C         p.1420

          .         .         .         .         . | 34       .    g.61767
 TTCCAAACCTGCCGGGACCCACGGGCAGCCAGCTGCCGGGACGTACCCAG | GGTAGAAGGC    c.4320
 F  Q  T  C  R  D  P  R  A  A  S  C  R  D  V  P  R  |  V  E  G      p.1440

          .         .         .         .         .         .       g.61827
 TGTGTCCCTGTGTGCCCCACCCCCCAGGTCCTGGATGAAGTCACACAGAGATGTGTCTAC       c.4380
 C  V  P  V  C  P  T  P  Q  V  L  D  E  V  T  Q  R  C  V  Y         p.1460

          . | 35       .         .         .         .         .    g.62332
 TTGGAGGACT | GTGTGGAGCCAGCAGTTTGGGTTCCCACAGAGGCCCTTGGCAATGAGACC    c.4440
 L  E  D  C |   V  E  P  A  V  W  V  P  T  E  A  L  G  N  E  T      p.1480

          .         .         .         .         .         .       g.62392
 CTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCACAGCTGTCACAGGAA       c.4500
 L  P  P  S  Q  G  L  P  T  P  S  D  E  E  P  Q  L  S  Q  E         p.1500

          .         .         .         .         .         .       g.62452
 AGCCCCAGGACCCCCACCCACAGGCCAGCCCTCACCCCAGCTGCCCCACTCACCACAGCC       c.4560
 S  P  R  T  P  T  H  R  P  A  L  T  P  A  A  P  L  T  T  A         p.1520

          .         .         .         .         .         .       g.62512
 CTGAACCCACCAGTGACAGCCACTGAGGAGCCAGTGGTGTCTCCAGGCCCCACCCAGACC       c.4620
 L  N  P  P  V  T  A  T  E  E  P  V  V  S  P  G  P  T  Q  T         p.1540

          .         .         .         .         .         .       g.62572
 ACCCTGCAGCAGCCACTGGAGCTCACTGCATCTCAACTCCCCGCCGGCCCCACGGAGTCC       c.4680
 T  L  Q  Q  P  L  E  L  T  A  S  Q  L  P  A  G  P  T  E  S         p.1560

          .         .         .         .         .         .       g.62632
 CCAGCCAGCAAGGGAGTGACTGCCAGCCTCCTGGCCATCCCCCATACACCAGAGTCCTCA       c.4740
 P  A  S  K  G  V  T  A  S  L  L  A  I  P  H  T  P  E  S  S         p.1580

          .         .         .         .         .         .       g.62692
 TCCCTCCCTGTTGCACTGCAGACACCCACACCTGGCATGGTGTCAGGTGCCATGGAGACA       c.4800
 S  L  P  V  A  L  Q  T  P  T  P  G  M  V  S  G  A  M  E  T         p.1600

          .         .         .         .         .         .       g.62752
 ACAAGGGTGACTGTGATCTTTGCAGGAAGCCCTAACATCACAGTCTCCTCCCGGTCGCCC       c.4860
 T  R  V  T  V  I  F  A  G  S  P  N  I  T  V  S  S  R  S  P         p.1620

          .         .         .         .         .         .       g.62812
 CCTGCCCCTCGCTTCCCGCTCATGACCAAGGCTGTGACAGTCCGAGGCCATGGCTCCTTG       c.4920
 P  A  P  R  F  P  L  M  T  K  A  V  T  V  R  G  H  G  S  L         p.1640

          .         .         .         .         .         .       g.62872
 CCTGTTAGGACGACACCCCCACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGACCTGTG       c.4980
 P  V  R  T  T  P  P  Q  P  S  L  T  A  S  P  S  S  R  P  V         p.1660

          .         .         .         .         .         .       g.62932
 GCTTCCCCTGGAGCCATCTCCAGGTCCCCCACCTCCTCGGGATCCCACAAGGCTGTGCTG       c.5040
 A  S  P  G  A  I  S  R  S  P  T  S  S  G  S  H  K  A  V  L         p.1680

          .         .         .         .         .         .       g.62992
 ACACCTGCAGTAACTAAGGTCATAAGCAGGACAGGGGTCCCCCAGCCCACCCAGGCCCAG       c.5100
 T  P  A  V  T  K  V  I  S  R  T  G  V  P  Q  P  T  Q  A  Q         p.1700

          .         .         .         .         .         .       g.63052
 AGTGCTTCAAGTCCCAGCACCCCTCTAACTGTGGCTGGAACAGCAGCAGAACAGGTTCCT       c.5160
 S  A  S  S  P  S  T  P  L  T  V  A  G  T  A  A  E  Q  V  P         p.1720

          .         .         .         .         .         .       g.63112
 GTCAGTCCCCTTGCAACCAGGAGCTTGGAGATAGTGCTATCCACAGAGAAGGGCGAAGCC       c.5220
 V  S  P  L  A  T  R  S  L  E  I  V  L  S  T  E  K  G  E  A         p.1740

          .         .         .         .         .         .       g.63172
 GGGCACAGCCAGCCCATGGGCTCGCCTGCCTCCCCACAGCCACACCCACTCCCCTCTGCA       c.5280
 G  H  S  Q  P  M  G  S  P  A  S  P  Q  P  H  P  L  P  S  A         p.1760

          .         .         .         .         .         .       g.63232
 CCACCCCGCCCAGCCCAGCATACCACCATGGCCACCAGGTCTCCAGCTCTGCCCCCAGAG       c.5340
 P  P  R  P  A  Q  H  T  T  M  A  T  R  S  P  A  L  P  P  E         p.1780

          .         .         .         .         .         .       g.63292
 ACCCCAGCTGCCGCCAGCCTGTCAACAGCCACTGATGGGCTGGCAGCCACACCCTTCATG       c.5400
 T  P  A  A  A  S  L  S  T  A  T  D  G  L  A  A  T  P  F  M         p.1800

          .         .         .         .         .         .       g.63352
 TCCCTTGAGTCAACTCGTCCCTCCCAGCTCCTCTCTGGCCTGCCTCCCGACACCAGCCTG       c.5460
 S  L  E  S  T  R  P  S  Q  L  L  S  G  L  P  P  D  T  S  L         p.1820

          .         .         .         .         .         .       g.63412
 CCCCTGGCCAAGGTGGGCACATCTGCCCCAGTGGCCACACCCGGCCCCAAAGCCTCTGTC       c.5520
 P  L  A  K  V  G  T  S  A  P  V  A  T  P  G  P  K  A  S  V         p.1840

          .         .         .         .         .         .       g.63472
 ATCACCACTCCACTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGTA       c.5580
 I  T  T  P  L  Q  P  Q  A  T  T  L  P  A  Q  T  L  S  P  V         p.1860

          .         .         .         .         .         .       g.63532
 CTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCACCCACCCACTCACATAGCACCCCCA       c.5640
 L  P  F  T  P  A  A  M  T  Q  A  H  P  P  T  H  I  A  P  P         p.1880

          .         .         .         .         .         .       g.63592
 GCAGCAGGCACAGCTCCAGGCCTGCTGCTGGGAGCCACATTGCCAACCTCTGGAGTCCTG       c.5700
 A  A  G  T  A  P  G  L  L  L  G  A  T  L  P  T  S  G  V  L         p.1900

          .         .         .         .         .         .       g.63652
 CCTGTGGCTGAGGGCACGGCCTCCATGGTATCTGTTGTCCCACGAAAGAGCACCACAGGG       c.5760
 P  V  A  E  G  T  A  S  M  V  S  V  V  P  R  K  S  T  T  G         p.1920

          .         .         .         .         .         .       g.63712
 AAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAGAG       c.5820
 K  V  A  I  L  S  K  Q  V  S  L  P  T  S  M  Y  G  S  A  E         p.1940

          .         .         .         .         .         .       g.63772
 GGTGGGCCCACAGAGCTCACGCCTGCTACGAGCCACCCTCTCACGCCCTTGGTGGCTGAG       c.5880
 G  G  P  T  E  L  T  P  A  T  S  H  P  L  T  P  L  V  A  E         p.1960

          .         .         .         .         .         .       g.63832
 CCCGAGGGAGCCCAGGCAGGCACAGCTCTGCCAGTGCCCACATCCTATGCCCTGAGCCGT       c.5940
 P  E  G  A  Q  A  G  T  A  L  P  V  P  T  S  Y  A  L  S  R         p.1980

          .         .         .         .         .         .       g.63892
 GTCTCAGCCAGGACGGCCCCCCAAGACAGCATGCTGGTTCTGTTGCCTCAGCTGGCTGAG       c.6000
 V  S  A  R  T  A  P  Q  D  S  M  L  V  L  L  P  Q  L  A  E         p.2000

          .         .         .         .         .         .       g.63952
 GCCCATGGAACCTCGGCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAGGCCACCACA       c.6060
 A  H  G  T  S  A  G  P  H  L  A  A  E  P  V  D  E  A  T  T         p.2020

          .         .         .         .         .         .       g.64012
 GAACCATCTGGGCGCTCAGCCCCAGCCCTGAGCATCGTAGAGGGTTTGGCGGAGGCTTTG       c.6120
 E  P  S  G  R  S  A  P  A  L  S  I  V  E  G  L  A  E  A  L         p.2040

          .         .         .          | 36        .         .    g.64810
 GCAACTACCACTGAGGCCAATACATCCACCACCTGTGTT | CCAATCGCCGAGCAGGACTGC    c.6180
 A  T  T  T  E  A  N  T  S  T  T  C  V   | P  I  A  E  Q  D  C      p.2060

          .         .         .         .         .         .       g.64870
 GTCCGCCACATCTGCCTGGAGGGCCAGCTGATTCGCGTGAATCAGTCCCAGCACTGTCCC       c.6240
 V  R  H  I  C  L  E  G  Q  L  I  R  V  N  Q  S  Q  H  C  P         p.2080

          .         .         .         .         .         .       g.64930
 CAGGGTGCTGCTCCCCCTCGCTGTGGGATCCTGGGCCTCGCCGTGCGGGTGGGTGGGGAC       c.6300
 Q  G  A  A  P  P  R  C  G  I  L  G  L  A  V  R  V  G  G  D         p.2100

          .         .         | 37         .         .         .    g.65279
 CGCTGCTGCCCACTCTGGGAGTGTGCCT | GCCGGTGCTCAATCTTCCCTGACCTGAGCTTC    c.6360
 R  C  C  P  L  W  E  C  A  C |   R  C  S  I  F  P  D  L  S  F      p.2120

          .         .         .         .         .         .       g.65339
 GTGACCTTCGATGGGAGCCACGTAGCTCTGTTCAAGGAGGCCATCTACATCCTCAGCCAG       c.6420
 V  T  F  D  G  S  H  V  A  L  F  K  E  A  I  Y  I  L  S  Q         p.2140

          .         .         .         .         .     | 38   .    g.66245
 AGCCCAGATGAAATGCTCACCGTCCATGTACTGGACTGCAAAAGTGCCAACCTG | GGGCAC    c.6480
 S  P  D  E  M  L  T  V  H  V  L  D  C  K  S  A  N  L   | G  H      p.2160

          .         .         .         .         .         .       g.66305
 CTGAACTGGCCCCCGTTCTGTCTGGTGATGTTGAACATGACTCACTTGGCCCATCAGGTC       c.6540
 L  N  W  P  P  F  C  L  V  M  L  N  M  T  H  L  A  H  Q  V         p.2180

          .         .     | 39   .         .         .         .    g.81796
 ACTATTGATCGCTTCAACCGAAAG | GTGACTGTGGACTTGCAGCCTGTGTGGCCACCGGTG    c.6600
 T  I  D  R  F  N  R  K   | V  T  V  D  L  Q  P  V  W  P  P  V      p.2200

          .         .         .         .         .         .       g.81856
 AGCAGGTATGGATTCAGAATTGAGGACACAGGCCACATGTACATGATCCTGACTCCCTCA       c.6660
 S  R  Y  G  F  R  I  E  D  T  G  H  M  Y  M  I  L  T  P  S         p.2220

          .         .         .         .         .         .       g.81916
 GACATCCAGATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCAGCAAAACC       c.6720
 D  I  Q  I  Q  W  L  H  S  S  G  L  M  I  V  E  A  S  K  T         p.2240

          .         .         | 40         .         .         .    g.84361
 AGCAAGGCCCAGGGCCATGGCCTGTGCG | GTATCTGTGATGGAGATGCAGCCAATGACCTT    c.6780
 S  K  A  Q  G  H  G  L  C  G |   I  C  D  G  D  A  A  N  D  L      p.2260

          .         .         .         .         .         .       g.84421
 ACCCTGAAGGATGGCTCAGTGGTGGGTGGGGCTGAGGACCCTGCTCCCTTTCTGGACAGC       c.6840
 T  L  K  D  G  S  V  V  G  G  A  E  D  P  A  P  F  L  D  S         p.2280

          .         .         .         .         .         .       g.84481
 TGGCAGGTGCCCAGCTCCCTGACCTCAGTGGGCCAGACCCGCTTCCGCCCAGACAGCTGC       c.6900
 W  Q  V  P  S  S  L  T  S  V  G  Q  T  R  F  R  P  D  S  C         p.2300

          .         .         .         .         .         .       g.84541
 GCCACAACTGACTGCTCGCCCTGCCTTCGCATGGTGTCCAACCGCACCTTCAGTGCCTGC       c.6960
 A  T  T  D  C  S  P  C  L  R  M  V  S  N  R  T  F  S  A  C         p.2320

           | 41        .         .         .         .         .    g.84766
 CACCGCTTT | GTGCCTCCGGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTG    c.7020
 H  R  F   | V  P  P  E  S  F  C  E  L  W  I  R  D  T  K  Y  V      p.2340

          .         .         .         .         .         .       g.84826
 CAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCATGTGCCACAAATTTCATGTGTGC       c.7080
 Q  Q  P  C  V  A  L  T  V  Y  V  A  M  C  H  K  F  H  V  C         p.2360

          .         .         | 42         .         .         .    g.86339
 ATCGAGTGGCGGCGCTCTGACTACTGCC | CCTTCCTGTGCTCCAGCGACTCCACATACCAG    c.7140
 I  E  W  R  R  S  D  Y  C  P |   F  L  C  S  S  D  S  T  Y  Q      p.2380

          .         .         .         .         .         .       g.86399
 GCATGTGTGACAGCCTGTGAGCCACCCAAGACATGCCAGGATGGGATACTAGGGCCTCTG       c.7200
 A  C  V  T  A  C  E  P  P  K  T  C  Q  D  G  I  L  G  P  L         p.2400

          .         .         .         .         .         .       g.86459
 GACCCAGAGCACTGCCAGGTGCTGGGCGAGGGCTGCGTCTGCTCCGAGGGCACCATCTTA       c.7260
 D  P  E  H  C  Q  V  L  G  E  G  C  V  C  S  E  G  T  I  L         p.2420

          .         .         .         .    | 43    .         .    g.86713
 CACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGTGCG | CCTGCACTGACAGCATG    c.7320
 H  R  R  H  S  A  L  C  I  P  E  A  K  C  A |   C  T  D  S  M      p.2440

          .         .         .         .         .         .       g.86773
 GGGGTGCCGAGGGCCCTGGGGGAGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCAC       c.7380
 G  V  P  R  A  L  G  E  T  W  N  S  S  L  S  G  C  C  Q  H         p.2460

          .         .         .         .         .         .       g.86833
 CAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTGCCCCAGTCCCCGCCCT       c.7440
 Q  C  Q  A  P  D  T  I  V  P  V  D  L  G  C  P  S  P  R  P         p.2480

          .         .         .         .         .         .       g.86893
 GAGAGCTGCCTGCGATTCGGGGAGGTGGCCTTGCTCCTACCCACCAAGGACCCCTGCTGC       c.7500
 E  S  C  L  R  F  G  E  V  A  L  L  L  P  T  K  D  P  C  C         p.2500

          .       | 44 .         .         .         .         .    g.87515
 CTGGGGACTGTCTGTG | TGTGTAACCAGACTCTGTGTGAGGGTCTCGCCCCCACATGCCGC    c.7560
 L  G  T  V  C  V |   C  N  Q  T  L  C  E  G  L  A  P  T  C  R      p.2520

          .         .         .         .         .         .       g.87575
 CCAGGCCACCGCCTCCTCACCCACTTCCAGGAGGACTCCTGCTGCCCCAGCTACAGCTGT       c.7620
 P  G  H  R  L  L  T  H  F  Q  E  D  S  C  C  P  S  Y  S  C         p.2540

   | 45      .         .         .         .         .         .    g.87766
 G | AGTGTGACCCAGATCTCTGTGAGGCAGAGCTGGTCCCCAGCTGCCGACAGGACCAGATC    c.7680
 E |   C  D  P  D  L  C  E  A  E  L  V  P  S  C  R  Q  D  Q  I      p.2560

          .         .         .         .          | 46        .    g.88248
 CTGATCACGGGCCGCCTGGGGGACTCCTGCTGCACCTCCTACTTCTGCG | CCTGTGGTGAC    c.7740
 L  I  T  G  R  L  G  D  S  C  C  T  S  Y  F  C  A |   C  G  D      p.2580

          .         .         .         .         .         .       g.88308
 TGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTCACTGTGCACAGGAATACC       c.7800
 C  P  D  S  I  P  E  C  Q  E  G  E  A  L  T  V  H  R  N  T         p.2600

          .         .         .  | 47      .         .         .    g.91107
 ACGGAACTCTGCTGCCCTCTGTACCAGTGTG | TGTGTGAGAACTTCCGCTGTCCCCAAGTG    c.7860
 T  E  L  C  C  P  L  Y  Q  C  V |   C  E  N  F  R  C  P  Q  V      p.2620

          .         .         .         .         .         .       g.91167
 CAGTGTGGCCTGGGCACTGCCCTGGTGGAGGTGTGGAGCCCCGACCGCTGCTGCCCCTAC       c.7920
 Q  C  G  L  G  T  A  L  V  E  V  W  S  P  D  R  C  C  P  Y         p.2640

          . | 48       .         .         .         .  | 49      . g.93381
 AAATCCTGTG | AATGTGACTGTGACACAATCCCGGTGCCCCGGTGCCATCTG | TGGGAGAAA c.7980
 K  S  C  E |   C  D  C  D  T  I  P  V  P  R  C  H  L   | W  E  K   p.2660

          .         .         .         .         .         .       g.93441
 TCCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGTGTGTGGCTGCGCCAAGTAC       c.8040
 S  Q  L  D  E  E  F  M  H  S  V  E  N  V  C  G  C  A  K  Y         p.2680

         | 50.         .         .         .         .         .    g.93593
 GAGTGTG | TGAAGGCCCCGGTGTGTCTGAGCCGCGAGCTGGGTGTGATGCAGCCCGGCCAG    c.8100
 E  C  V |   K  A  P  V  C  L  S  R  E  L  G  V  M  Q  P  G  Q      p.2700

          .         .         .         .         .         .       g.93653
 ACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGCCACACCTCCCGCTGCACCACCGTGCTC       c.8160
 T  V  V  E  L  S  A  D  G  V  C  H  T  S  R  C  T  T  V  L         p.2720

          .         .         .         .         .         .       g.93713
 GACCCTCTCACCAACTTCTACCAGATCAACACCACCTCCGTGCTCTGTGACATCCACTGT       c.8220
 D  P  L  T  N  F  Y  Q  I  N  T  T  S  V  L  C  D  I  H  C         p.2740

        | 51 .         .         .         .         .         .    g.94528
 GAGGCG | AACCAGGAGTACGAGCACCCGCGGGACCTCGCTGCCTGCTGCGGCTCCTGCAGG    c.8280
 E  A   | N  Q  E  Y  E  H  P  R  D  L  A  A  C  C  G  S  C  R      p.2760

          .         .         .         .         .  | 52      .    g.94763
 AACGTGTCCTGTCTCTTCACCTTCCCCAATGGCACCACCTCCCTGTTCTTG | CCCGGGGCA    c.8340
 N  V  S  C  L  F  T  F  P  N  G  T  T  S  L  F  L   | P  G  A      p.2780

          .         .         .         .         .         .       g.94823
 TCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTG       c.8400
 S  W  I  A  D  C  A  R  H  H  C  S  S  T  P  L  G  A  V  L         p.2800

          .         .         .         .         .  | 53      .    g.96097
 GTCCGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGCCAAG | GTTGGGGGT    c.8460
 V  R  S  P  I  S  C  P  P  L  N  E  T  E  C  A  K   | V  G  G      p.2820

          .         .         .        | 54.         .         .    g.98214
 TCCGTGGTACCTTCCTTGGAAGGATGCTGCAGGACCT | GTAAGGAGGATGGGCGCTCCTGC    c.8520
 S  V  V  P  S  L  E  G  C  C  R  T  C |   K  E  D  G  R  S  C      p.2840

          .         .         .         .         .        | 55.    g.98374
 AAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCT | GTG    c.8580
 K  K  V  T  I  R  M  T  I  R  K  N  E  C  R  S  S  T  P   | V      p.2860

          .         .         .         .         .         .       g.98434
 AACCTAGTGTCCTGCGATGGGAGGTGCCCATCCGCCAGCATCTACAACTACAACATCAAC       c.8640
 N  L  V  S  C  D  G  R  C  P  S  A  S  I  Y  N  Y  N  I  N         p.2880

          .         .         .         .         .         .       g.98494
 ACCTATGCCCGATTCTGCAAGTGCTGCCGTGAGGTGGGCCTGCAGCGGCGCTCTGTGCAG       c.8700
 T  Y  A  R  F  C  K  C  C  R  E  V  G  L  Q  R  R  S  V  Q         p.2900

          .         .         .         .         .         .       g.98554
 CTCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATACAGTGCAGGAGCCCACCGACTGT       c.8760
 L  F  C  A  T  N  A  T  W  V  P  Y  T  V  Q  E  P  T  D  C         p.2920

          .                                                         g.98572
 GCCTGCCAGTGGTCCTGA                                                 c.8778
 A  C  Q  W  S  X                                                   p.2925

 

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Otogelin protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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