orthodenticle homeobox 2 (OTX2) - 4583 nt intron 02 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5378
gtaagtgtccgtctgtcttgtctatatccatatctacgtgtccccgtgtctgtcggccat  c.-120+60

         .         .         .         .         .         .  g.5438
caccccagtacctccaatagaccgaccgatgcccctctgcgaacgtggagttctgtaggc  c.-120+120

         .         .         .         .         .         .  g.5498
ggatgtattttttctcttacaaattttgaggtgtaataacgatcgttgcaaaaagaaaaa  c.-120+180

         .         .         .         .         .         .  g.5558
tgtgatctagagatgagagcggtagtgggagagaggcagagagcgtgctcctgggggtcg  c.-120+240

         .         .         .         .         .         .  g.5618
tcgcttctgcaaaacgtcgtcgaaacgctgcgaatgtaatctggggtgttttggaaggtt  c.-120+300

         .         .         .         .         .         .  g.5678
ttgtttgtggttttgtttttatgtcaacgccgttctgggcttctcccgcgatctttgcgt  c.-120+360

         .         .         .         .         .         .  g.5738
tttggcccccagatttggttggggtcgtttggatggatcccagggacctttttagagtcc  c.-120+420

         .         .         .         .         .         .  g.5798
gagacaaaaagatgcagatgtaactagatggatggattgaaacaacaataataaaaagcc  c.-120+480

         .         .         .         .         .         .  g.5858
aggcgcctccttgggcccgcgcgccggaagctcggttcgcttgcgggtcggcctgggccg  c.-120+540

         .         .         .         .         .         .  g.5918
ggggccgccgctcgagcccctgtcggcccctgttgaacgtgagcggaaaccggagcggat  c.-120+600

         .         .         .         .         .         .  g.5978
aaccgaggaggctgggagcgctggcttctcgtccgccccggcgctcactgctcgctctct  c.-120+660

         .         .         .         .         .         .  g.6038
ttggcctcctctccctcagcctagcacagctcggttgtctgtttctcccaaaagcttcca  c.-120+720

         .         .         .         .         .         .  g.6098
gatctcctttttgtttttaaatatccaccaccccccaaaatccaaaccaccctgggttgt  c.-120+780

         .         .         .         .         .         .  g.6158
aattacgcagcctcccaacccccggttgtcgtggtccccgaccctggtcaccaggccgag  c.-120+840

         .         .         .         .         .         .  g.6218
cgaacgtgaagagtgttttttcaacatgactttgccgggtcgcggcccgccccacgtagc  c.-120+900

         .         .         .         .         .         .  g.6278
cctccgcgcgcacctggggcgggcagaagtggcagctagtggcccctgctccgcccaagg  c.-120+960

         .         .         .         .         .         .  g.6338
ccgcggccgggccagggaccggaatcctcccgctgggaccgcggcccctcagctgttctc  c.-120+1020

         .         .         .         .         .         .  g.6398
tggcggggagaggcagggctcgcccgcgcgctcgcgcacccccttcccaggctccaggac  c.-120+1080

         .         .         .         .         .         .  g.6458
aatgaggtgtcgtggctcggggccgggcgggggccgaggggttcgccgaggcccagcctg  c.-120+1140

         .         .         .         .         .         .  g.6518
tgccatggatcggcccagtaagaaccatccgaaggtccctgccagcgccgggcgcgggcg  c.-120+1200

         .         .         .         .         .         .  g.6578
acgggtcgctctgcaaactcccaagaagtcttcgcgttgttgcgttcaagtgactcttga  c.-120+1260

         .         .         .         .         .         .  g.6638
aatcgatgcccgatttcgggacatatttttggaaacccaagtcccctgtcaggattccac  c.-120+1320

         .         .         .         .         .         .  g.6698
cgagttggcttttgcttccttcacagatagaactggtgcgcggggagcgaaggccgagcg  c.-120+1380

         .         .         .         .         .         .  g.6758
gcgccgaccctgcggtggtggattgcttggggaggggacggggaagtcgctcctagaaat  c.-120+1440

         .         .         .         .         .         .  g.6818
tctcccctccatcctagagcttcggggtcaggatttctcctgctcagctcgggacttttt  c.-120+1500

         .         .         .         .         .         .  g.6878
acaggcaccaaaagttattagcaacagaggggagtaggagagggaactcctccccccaga  c.-120+1560

         .         .         .         .         .         .  g.6938
gtaaggtagacacccagacctcagcgctaacaccggggctttctcccaacgataattaat  c.-120+1620

         .         .         .         .         .         .  g.6998
agtcaaggccaacccttttggcacgtttcttcctccctccctcgcgggtggcagagttat  c.-120+1680

         .         .         .         .         .         .  g.7058
ttgattccccgaggccagaaactttcactcgagttcgccggagagaggccagcgccggcc  c.-120+1740

         .         .         .         .         .         .  g.7118
gttttccgcggtgcccacacgtctcctttttctttctttcctcctcttcgtcgtcttccc  c.-120+1800

         .         .         .         .         .         .  g.7178
agccgcaggccagtcgccagtccgcgtagttttgtttcctttccatcatgcagaaaatta  c.-120+1860

         .         .         .         .         .         .  g.7238
atcagcccggacgagaagcagagaggagcatggcggcctgtaattaagggacgtgtgccc  c.-120+1920

         .         .         .         .         .         .  g.7298
ctcggattatctcgttagtttatcaagaaaacatttattataattaattctcggacgagg  c.-120+1980

         .         .         .         .         .         .  g.7358
taattattgttgagcgaggacacagcaactggtagatgggcttcttggaagaaaaaaaaa  c.-120+2040

         .         .         .         .         .         .  g.7418
acaaggcgtgggggagggagaagcgacagattgcacgaattgaccgttagatataaggct  c.-120+2100

         .         .         .         .         .         .  g.7478
gcgcggggggcgcgggcagtggagcgggacctcgggcgccaggcctgcggggctgcgggg  c.-120+2160

         .         .         .         .         .         .  g.7538
ctgcggggctgcggggctgcggggctgccgggcaggaacgcgggacccaggcactcgcgc  c.-120+2220

         .         .         .         .         .         .  g.7598
ccggaggtgcggtcgccgaccggctgccggaactcgccgcgcgaccgcggtcagcttcta  c.-120+2280

         .    g.7610
ggtatgagttct  c.-120+2292

--------------------- middle of intron ---------------------
                                    g.7611        .           g.7621
                                    c.-119-2291  ccagaggccac  c.-119-2281

.         .         .         .         .         .           g.7681
ctcgtgagcagtcatagtgaggcgtggatttttcaaaagttatttcttttccccgttctg  c.-119-2221

.         .         .         .         .         .           g.7741
gaccctgcttcgagaggaaaagagctttgaaagttagattgaagggcccatgccttctat  c.-119-2161

.         .         .         .         .         .           g.7801
gcagagtgcatacctaggccggttgtggagagaatctcttagttttgggttttggttttc  c.-119-2101

.         .         .         .         .         .           g.7861
ctcttttccttttaaaggtggatccaggagcaaaagtgaaaatagtctattttgagaatt  c.-119-2041

.         .         .         .         .         .           g.7921
ttagccattttgcaatggtaagggcaaaggagcccctggaaggatctcggccctggtgct  c.-119-1981

.         .         .         .         .         .           g.7981
ttctgtgtgttactggctttttatgttggaatgtgctactttattgtatgatgtgtcagg  c.-119-1921

.         .         .         .         .         .           g.8041
catttctaattgggtgagagctctacatgtaagaacatttccatatttctcaagggtaca  c.-119-1861

.         .         .         .         .         .           g.8101
tctgatatgattttacgattctctatagcactgtagttcagaattttgcaaggtagtacg  c.-119-1801

.         .         .         .         .         .           g.8161
attaaacaaaaaatctccaatctccagtttagaggctgtttaaacacatatacaactgta  c.-119-1741

.         .         .         .         .         .           g.8221
ttttaaagctgtcgcatatgtgtttaaacagcctctaagctggagatttttgtttatttt  c.-119-1681

.         .         .         .         .         .           g.8281
cgcagcctccaaagaacagcattttgaaaagaaaagacaatacaaaaacataaagtctgt  c.-119-1621

.         .         .         .         .         .           g.8341
attgtaggggcaactaaattagttgtactgaggataatacaaactcctccaagaaagaca  c.-119-1561

.         .         .         .         .         .           g.8401
tttataaaattatattaagttagatcttagggtagaaaagcatgacttttgtgctctgaa  c.-119-1501

.         .         .         .         .         .           g.8461
tttaaatcagaaagaagttgcagttactaagtttcatttatggacttttgtgccttgctg  c.-119-1441

.         .         .         .         .         .           g.8521
tcttaagcaacgtaaatatgaaaacccggagtcctttaaagtcagtgagacctttatctt  c.-119-1381

.         .         .         .         .         .           g.8581
gtatccgccattttgaagcaatctctcatggtgtcaaagtttcaaagtagagatccttgc  c.-119-1321

.         .         .         .         .         .           g.8641
atataagtgccacattttaggaaaataaaggccagacttgcaaactgccagtctatatta  c.-119-1261

.         .         .         .         .         .           g.8701
acatctactttgaatctctttgctggggtggaggcggggagctcagctgaagaaagtaaa  c.-119-1201

.         .         .         .         .         .           g.8761
taacttttctttttcttcctttcttttcccccttgagctctttttcttataggattgtag  c.-119-1141

.         .         .         .         .         .           g.8821
gaaacttgaaaggtagggagaaattctactagtttcacaactttgggtgtttgtgtatct  c.-119-1081

.         .         .         .         .         .           g.8881
actttcttcaaaactaaaatgtgcaaaaggcagttagagttaacaggaaactctgctgca  c.-119-1021

.         .         .         .         .         .           g.8941
gctgccgaggacccaaatgtctgaaaatttgcctcccgcaggatctgcagcctccacaca  c.-119-961

.         .         .         .         .         .           g.9001
tcaaaatcaacatggaagcagcttgcactacaaatgtggggtcccgtcattatctgattg  c.-119-901

.         .         .         .         .         .           g.9061
gtgggattctaactttacttcacaatttctggcaagccctgtgccaatcttgaagacttt  c.-119-841

.         .         .         .         .         .           g.9121
tttggaatatgcttaaatatttgatgggtgtctattaaaagttaaatacttgtttgttta  c.-119-781

.         .         .         .         .         .           g.9181
gctttcgttccttagacacatataatcaagattctccaaaaccctaataaatctgttact  c.-119-721

.         .         .         .         .         .           g.9241
tacctcgaaatctaattacccagactactaattaggtgaaaatgattaccggaaatgact  c.-119-661

.         .         .         .         .         .           g.9301
tcaaatgtggaataatagtggttgagcggtttttccaagtttgtggtttagtgagttggt  c.-119-601

.         .         .         .         .         .           g.9361
attttagatgttaaacgcactgacattttaggttcgcagcagttgaaagtggtaaaaagc  c.-119-541

.         .         .         .         .         .           g.9421
taagataattaaaatctctgccatggaaaggcaacagtctggggagaggtagatttcttg  c.-119-481

.         .         .         .         .         .           g.9481
aattgtttctttgtttctcaccaatgggctttgttatcagcattatttatttagccaaag  c.-119-421

.         .         .         .         .         .           g.9541
agttctttgtctctgcaaatggccccaatcaagttttgtttgagacaattagctagtgcc  c.-119-361

.         .         .         .         .         .           g.9601
agccaatgagtcctatgcaaatgtagggataggaatgcaatgtgtgcatttgaaggcacg  c.-119-301

.         .         .         .         .         .           g.9661
ggtttttgttcttggggaaggcagattgtaattgctttcttcgggtactttttttttttt  c.-119-241

.         .         .         .         .         .           g.9721
tttaagtttagggtgggggtggggaagacaggtttatctggtctccttccatcccctcta  c.-119-181

.         .         .         .         .         .           g.9781
gttccagagcagctgggggtgggggtggggatgggggtggggggagtgtctgcaagtcct  c.-119-121

.         .         .         .         .         .           g.9841
ttaaaagcctctgcctcgcctagtccgtgctctttttaagttagtgctggaacgtggaag  c.-119-61

.         .         .         .         .         .           g.9901
agctgctgcctccgaagcagtaaaccagcccctctgtttgtttgtttgctttgcccttag  c.-119-1


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