(used for variant description)
(last modified July 20, 2016)
This file was created to facilitate the description of sequence variants on transcript NM_014499.2 in the P2RY10 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_013276.1, covering P2RY10 transcript NM_014499.2.
(upstream sequence)
g.5009
tttgtgcaa c.-361
. . . . . . g.5069
ataaggtttctgtggtgagacaccagataaactcaacttcctctttcaacaacaaatgtg c.-301
. . . . . . g.5129
tcagttatcagcaggatccatgccgccagagtaaagctttctaccctttactccctgcaa c.-241
. . . . | 02 . . g.7508
agaaacaagagtgcttatcccagctaagctccagg | gtaatgttatcatgacagcttcaac c.-181
. . . | 03 . . . g.11897
ttttagaccacaggcaaatgcttt | gttaaaactctatgctggtcattcccttcaggattt c.-121
. . . . . . g.11957
ggcactcaccaacatacccttctttcaagtgaaaaggcatctcttttaatggtcctgacc c.-61
. . . . . | 04 . g.20189
tttggaataggaagcatgtaccctggacagagcacttcaaactagag | gaaccataaatcc c.-1
. . . . . . g.20249
ATGGCTAACCTTGACAAATACACTGAAACATTCAAGATGGGTAGCAACAGTACCAGCACT c.60
M A N L D K Y T E T F K M G S N S T S T p.20
. . . . . . g.20309
GCTGAGATTTACTGTAATGTCACTAATGTGAAATTTCAATACTCCCTCTATGCAACCACC c.120
A E I Y C N V T N V K F Q Y S L Y A T T p.40
. . . . . . g.20369
TATATCCTCATATTCATTCCTGGTCTTCTGGCTAACAGTGCAGCCTTGTGGGTTCTGTGC c.180
Y I L I F I P G L L A N S A A L W V L C p.60
. . . . . . g.20429
CGCTTCATCAGCAAGAAAAATAAAGCCATCATTTTCATGATCAACCTCTCTGTGGCTGAC c.240
R F I S K K N K A I I F M I N L S V A D p.80
. . . . . . g.20489
CTTGCTCATGTATTATCTTTACCCCTCCGGATTTACTATTACATCAGCCACCACTGGCCT c.300
L A H V L S L P L R I Y Y Y I S H H W P p.100
. . . . . . g.20549
TTCCAGAGAGCCCTTTGCCTGCTCTGCTTCTACCTGAAGTATCTCAACATGTATGCCAGC c.360
F Q R A L C L L C F Y L K Y L N M Y A S p.120
. . . . . . g.20609
ATTTGTTTCCTGACGTGCATCAGTCTTCAAAGGTGCTTTTTTCTCCTCAAGCCCTTCAGG c.420
I C F L T C I S L Q R C F F L L K P F R p.140
. . . . . . g.20669
GCCAGAGACTGGAAGCGTAGGTACGATGTGGGCATCAGTGCTGCCATCTGGATCGTTGTG c.480
A R D W K R R Y D V G I S A A I W I V V p.160
. . . . . . g.20729
GGGACTGCCTGTTTGCCATTTCCCATCCTGAGAAGCACAGACTTAAACAACAACAAGTCC c.540
G T A C L P F P I L R S T D L N N N K S p.180
. . . . . . g.20789
TGCTTTGCTGATCTTGGATACAAGCAAATGAATGCAGTTGCGTTGGTCGGGATGATTACA c.600
C F A D L G Y K Q M N A V A L V G M I T p.200
. . . . . . g.20849
GTTGCTGAGCTTGCAGGATTTGTGATCCCAGTGATCATCATCGCATGGTGTACCTGGAAA c.660
V A E L A G F V I P V I I I A W C T W K p.220
. . . . . . g.20909
ACTACTATATCCTTGAGACAGCCACCAATGGCTTTCCAAGGGATCAGTGAGAGGCAGAAA c.720
T T I S L R Q P P M A F Q G I S E R Q K p.240
. . . . . . g.20969
GCACTGCGGATGGTGTTCATGTGTGCTGCAGTCTTCTTCATCTGCTTCACTCCCTATCAT c.780
A L R M V F M C A A V F F I C F T P Y H p.260
. . . . . . g.21029
ATTAACTTTATTTTTTACACCATGGTAAAGGAAACCATCATTAGCAGTTGTCCCGTTGTC c.840
I N F I F Y T M V K E T I I S S C P V V p.280
. . . . . . g.21089
CGAATCGCACTGTATTTCCACCCTTTTTGCCTGTGCCTTGCAAGTCTCTGCTGCCTTTTG c.900
R I A L Y F H P F C L C L A S L C C L L p.300
. . . . . . g.21149
GATCCAATTCTTTATTACTTTATGGCTTCAGAGTTTCGTGACCAACTATCCCGCCATGGC c.960
D P I L Y Y F M A S E F R D Q L S R H G p.320
. . . . . . g.21209
AGTTCTGTGACCCGCTCCCGCCTCATGAGCAAGGAGAGTGGTTCATCAATGATTGGCTAA c.1020
S S V T R S R L M S K E S G S S M I G X p.339
. . . . . . g.21269
aattaagatatctctttaattacgcctttgtttacctacgttccttgtctttttccaaag c.*60
. . . . . . g.21329
gccagaattgtcaaccaatttctttaattgaacattgtaaaaaacaggaataagtacttt c.*120
. . . . . . g.21389
tgtgtaatattcacagtcaacaggggtgtgatggtgaaggcagagtgtgaaaaacgtgag c.*180
. . . . . . g.21449
agaggaagagaaaatagatttacctgattcctctttaaaattcaagccactttcttattt c.*240
. . . . . . g.21509
aagaaacctagatcaagtttttacagatgtaaataaaagttgaatagtttaccttaaatt c.*300
. . . . . . g.21569
tttttcaataagtaagttattgttaataatgcacagtaaatatgtgaatttttcctagat c.*360
. . . . g.21610
gtaaaaaaaaaaatctttcatataaagaccttaaattctga c.*401
(downstream sequence)
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