plexin A3 (PLXNA3) - coding DNA reference sequence

(used for variant description)

(last modified October 20, 2013)


This file was created to facilitate the description of sequence variants on transcript NM_017514.3 in the PLXNA3 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_021298.2, covering PLXNA3 transcript NM_017514.3.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
           .         .         .         .         .                g.5053
        tgtgtgggcggcggcggcggcggctgcgcgcttggggcccggggcgcggggcg       c.-121

 .         .         .         .         .         .                g.5113
 aggccgtggggacgtgcgagcggggccgcggtggggctcgggggcgcgtccacgtggcca       c.-61

 .         .         .         .   | 02     .         .             g.6901
 gagggcggccacccggagccagcggagggacag | gcctgtccccaggcgcggctgccggcc    c.-1

          .         .         .         .         .         .       g.6961
 ATGCCCTCTGTCTGCCTCCTCCTGCTGCTCTTCCTTGCCGTGGGGGGGGCCCTGGGCAAC       c.60
 M  P  S  V  C  L  L  L  L  L  F  L  A  V  G  G  A  L  G  N         p.20

          .         .         .         .         .         .       g.7021
 AGGCCCTTCCGTGCCTTCGTGGTGACAGACACCACGCTTACCCACCTGGCTGTGCACCGG       c.120
 R  P  F  R  A  F  V  V  T  D  T  T  L  T  H  L  A  V  H  R         p.40

          .         .         .         .         .         .       g.7081
 GTGACTGGGGAGGTGTTCGTGGGCGCAGTGAACCGAGTCTTTAAGCTGGCCCCCAACCTG       c.180
 V  T  G  E  V  F  V  G  A  V  N  R  V  F  K  L  A  P  N  L         p.60

          .         .         .         .         .         .       g.7141
 ACTGAGCTGCGGGCCCATGTCACGGGGCCCGTCGAGGACAACGCTCGCTGCTACCCGCCC       c.240
 T  E  L  R  A  H  V  T  G  P  V  E  D  N  A  R  C  Y  P  P         p.80

          .         .         .         .         .         .       g.7201
 CCCAGCATGCGCGTGTGTGCCCACCGCCTGGCCCCCGTGGACAACATCAACAAGCTGCTG       c.300
 P  S  M  R  V  C  A  H  R  L  A  P  V  D  N  I  N  K  L  L         p.100

          .         .         .         .         .         .       g.7261
 CTCATAGACTATGCGGCCCGCCGCCTGGTGGCCTGCGGCAGCATCTGGCAGGGCATCTGC       c.360
 L  I  D  Y  A  A  R  R  L  V  A  C  G  S  I  W  Q  G  I  C         p.120

          .         .         .         .         .         .       g.7321
 CAGTTCCTGCGTCTGGACGACCTCTTCAAGCTGGGTGAGCCGCACCACCGCAAGGAGCAC       c.420
 Q  F  L  R  L  D  D  L  F  K  L  G  E  P  H  H  R  K  E  H         p.140

          .         .         .         .         .         .       g.7381
 TACCTGTCGGGGGCCCAGGAGCCCGACTCCATGGCTGGTGTCATTGTGGAGCAGGGCCAG       c.480
 Y  L  S  G  A  Q  E  P  D  S  M  A  G  V  I  V  E  Q  G  Q         p.160

          .         .         .         .         .         .       g.7441
 GGGCCCAGCAAGCTGTTTGTGGGCACTGCTGTCGACGGCAAGTCGGAGTACTTCCCCACC       c.540
 G  P  S  K  L  F  V  G  T  A  V  D  G  K  S  E  Y  F  P  T         p.180

          .         .         .         .         .     | 03   .    g.7822
 TTGAGCTCCCGCAAGCTCATCAGTGATGAAGACAGCGCGGACATGTTCAGTCTC | GTGTAC    c.600
 L  S  S  R  K  L  I  S  D  E  D  S  A  D  M  F  S  L   | V  Y      p.200

          .         .         .         .         .         .       g.7882
 CAGGATGAGTTTGTGTCCTCCCAGATCAAGATCCCCTCAGACACGCTGTCCTTGTACCCT       c.660
 Q  D  E  F  V  S  S  Q  I  K  I  P  S  D  T  L  S  L  Y  P         p.220

          .         .         .         .         .         .       g.7942
 GCCTTTGACATCTACTACATCTACGGCTTCGTCAGCGCCTCCTTCGTGTACTTCCTGACG       c.720
 A  F  D  I  Y  Y  I  Y  G  F  V  S  A  S  F  V  Y  F  L  T         p.240

          .         .         .         .         .         .       g.8002
 CTGCAGCTGGACACCCAGCAGACGCTGTTGGACACAGCGGGCGAGAAATTTTTCACGTCC       c.780
 L  Q  L  D  T  Q  Q  T  L  L  D  T  A  G  E  K  F  F  T  S         p.260

          .         .         .         .         .         .       g.8062
 AAGATCGTGCGCATGTGCGCGGGAGACTCAGAGTTCTACTCATACGTGGAATTCCCCATC       c.840
 K  I  V  R  M  C  A  G  D  S  E  F  Y  S  Y  V  E  F  P  I         p.280

          .         .         .         .         .         .       g.8122
 GGCTGCTCCTGGCGCGGCGTGGAGTACCGCTTGGTGCAGAGCGCCCACCTGGCCAAGCCT       c.900
 G  C  S  W  R  G  V  E  Y  R  L  V  Q  S  A  H  L  A  K  P         p.300

          .         .         .         .         .         .       g.8182
 GGCCTGCTGCTGGCCCAGGCCCTGGGCGTGCCGGCTGATGAGGACGTCCTCTTCACCATC       c.960
 G  L  L  L  A  Q  A  L  G  V  P  A  D  E  D  V  L  F  T  I         p.320

          .         .         .         .         .         .       g.8242
 TTCTCTCAGGGCCAGAAGAACCGGGCCAGCCCACCCCGGCAGACCATCCTCTGCCTCTTC       c.1020
 F  S  Q  G  Q  K  N  R  A  S  P  P  R  Q  T  I  L  C  L  F         p.340

          .         .         .         .         .         .       g.8302
 ACCCTCAGCAACATCAATGCCCACATCCGGCGCCGCATCCAGTCCTGCTATCGTGGGGAG       c.1080
 T  L  S  N  I  N  A  H  I  R  R  R  I  Q  S  C  Y  R  G  E         p.360

          .         .         .         .         .     | 04   .    g.8851
 GGCACTCTGGCTCTGCCCTGGCTGCTGAACAAGGAGCTGCCCTGCATCAACACC | CCCATG    c.1140
 G  T  L  A  L  P  W  L  L  N  K  E  L  P  C  I  N  T   | P  M      p.380

          .         .         .         .         .         .       g.8911
 CAGATCAACGGCAACTTCTGTGGGCTGGTGTTGAACCAGCCTCTGGGAGGCCTGCATGTG       c.1200
 Q  I  N  G  N  F  C  G  L  V  L  N  Q  P  L  G  G  L  H  V         p.400

          .         .         .         .         .         .       g.8971
 ATCGAGGGGCTGCCCCTGCTGGCCGACAGCACCGACGGCATGGCCAGCGTGGCCGCCTAC       c.1260
 I  E  G  L  P  L  L  A  D  S  T  D  G  M  A  S  V  A  A  Y         p.420

          .         .         .         .         .        | 05.    g.10114
 ACCTACCGCCAGCACTCTGTGGTCTTCATTGGCACGCGCAGCGGCAGCTTGAAGAAG | GTG    c.1320
 T  Y  R  Q  H  S  V  V  F  I  G  T  R  S  G  S  L  K  K   | V      p.440

          .         .         .         .         .         .       g.10174
 CGGGTCGATGGCTTCCAGGATGCCCACCTGTATGAGACAGTCCCCGTGGTGGATGGCAGC       c.1380
 R  V  D  G  F  Q  D  A  H  L  Y  E  T  V  P  V  V  D  G  S         p.460

          .         .         .         .         .         .       g.10234
 CCCATCCTCCGAGACCTGCTCTTCAGCCCGGACCACCGGCACATCTATCTCCTGAGTGAG       c.1440
 P  I  L  R  D  L  L  F  S  P  D  H  R  H  I  Y  L  L  S  E         p.480

        | 06 .         .         .         .         .         .    g.10364
 AAGCAG | GTGAGCCAGCTCCCGGTGGAGACCTGTGAGCAGTACCAGAGCTGCGCAGCCTGC    c.1500
 K  Q   | V  S  Q  L  P  V  E  T  C  E  Q  Y  Q  S  C  A  A  C      p.500

          .         .         .         .        | 07.         .    g.10684
 CTGGGCTCCGGGGACCCGCACTGTGGTTGGTGTGTGCTGCGACACAG | GTGCTGCCGCGAA    c.1560
 L  G  S  G  D  P  H  C  G  W  C  V  L  R  H  R  |  C  C  R  E      p.520

          .         .         .         .         .         .       g.10744
 GGGGCCTGTCTGGGCGCCTCTGCCCCACACGGCTTTGCTGAGGAGCTGAGCAAGTGTGTC       c.1620
 G  A  C  L  G  A  S  A  P  H  G  F  A  E  E  L  S  K  C  V         p.540

          .         .         .         .         .  | 08      .    g.10886
 CAGGTGCGGGTCCGGCCCAACAATGTGTCAGTGACGTCACCTGGGGTGCAG | CTGACCGTC    c.1680
 Q  V  R  V  R  P  N  N  V  S  V  T  S  P  G  V  Q   | L  T  V      p.560

          .         .         .         .         .         .       g.10946
 ACCCTGCACAACGTGCCAGACCTCAGTGCGGGCGTGAGCTGCGCCTTCGAGGCGGCGGCG       c.1740
 T  L  H  N  V  P  D  L  S  A  G  V  S  C  A  F  E  A  A  A         p.580

          .         .         .         .         .         .       g.11006
 GAGAACGAGGCGGTCCTGCTGCCCTCCGGTGAACTGCTCTGCCCCTCACCCTCCCTCCAG       c.1800
 E  N  E  A  V  L  L  P  S  G  E  L  L  C  P  S  P  S  L  Q         p.600

          .         .         | 09         .         .         .    g.11154
 GAGCTCCGAGCTCTTACCAGGGGGCATG | GGGCCACCCGCACTGTGCGGCTGCAGCTTCTC    c.1860
 E  L  R  A  L  T  R  G  H  G |   A  T  R  T  V  R  L  Q  L  L      p.620

          .         .         .         .         .         .       g.11214
 TCCAAGGAGACAGGCGTGAGGTTTGCCGGTGCTGACTTTGTCTTCTACAACTGCAGCGTC       c.1920
 S  K  E  T  G  V  R  F  A  G  A  D  F  V  F  Y  N  C  S  V         p.640

          | 10         .         .         .         .         .    g.11526
 CTCCAGTC | GTGCATGTCCTGTGTTGGCAGCCCTTACCCCTGCCACTGGTGTAAGTACCGC    c.1980
 L  Q  S  |  C  M  S  C  V  G  S  P  Y  P  C  H  W  C  K  Y  R      p.660

          .         .         .         .         .         .       g.11586
 CACACGTGTACCAGCCGCCCCCACGAGTGCTCCTTCCAGGAGGGCAGGGTCCACAGCCCT       c.2040
 H  T  C  T  S  R  P  H  E  C  S  F  Q  E  G  R  V  H  S  P         p.680

     | 11    .         .         .         .         .         .    g.11795
 GAG | GGCTGCCCTGAGATCCTGCCCAGTGGGGACCTCCTGATCCCCGTTGGGGTCATGCAG    c.2100
 E   | G  C  P  E  I  L  P  S  G  D  L  L  I  P  V  G  V  M  Q      p.700

          .         .         .         .         .         .       g.11855
 CCTCTTACCTTGCGGGCTAAGAACCTACCTCAGCCGCAGTCGGGCCAGAAGAACTATGAG       c.2160
 P  L  T  L  R  A  K  N  L  P  Q  P  Q  S  G  Q  K  N  Y  E         p.720

          .         .         .         .         .         .       g.11915
 TGCGTGGTGCGGGTGCAGGGGCGGCAGCAGCGGGTGCCTGCCGTGCGCTTCAACAGCAGC       c.2220
 C  V  V  R  V  Q  G  R  Q  Q  R  V  P  A  V  R  F  N  S  S         p.740

          .         .     | 12   .         .         .         .    g.12180
 AGTGTGCAGTGCCAGAACGCCTCG | TACTCCTATGAAGGTGATGAGCATGGTGACACCGAG    c.2280
 S  V  Q  C  Q  N  A  S   | Y  S  Y  E  G  D  E  H  G  D  T  E      p.760

          .         .         .         .         .         .       g.12240
 CTGGACTTCTCCGTGGTCTGGGATGGAGACTTCCCCATAGACAAGCCTCCCAGCTTCCGA       c.2340
 L  D  F  S  V  V  W  D  G  D  F  P  I  D  K  P  P  S  F  R         p.780

   | 13      .         .         .         .         .         .    g.12436
 G | CCCTCCTGTACAAGTGCTGGGCGCAGCGGCCCAGCTGTGGCCTCTGCCTCAAGGCTGAT    c.2400
 A |   L  L  Y  K  C  W  A  Q  R  P  S  C  G  L  C  L  K  A  D      p.800

          .         .         .         .         .         .       g.12496
 CCCCGCTTCAACTGTGGCTGGTGCATCTCAGAGCACAGGTGCCAGCTGCGGACCCACTGC       c.2460
 P  R  F  N  C  G  W  C  I  S  E  H  R  C  Q  L  R  T  H  C         p.820

          .         .         .         .         .         .       g.12556
 CCGGCCCCGAAGACCAACTGGATGCACCTGAGCCAGAAGGGCACCCGGTGCAGCCACCCC       c.2520
 P  A  P  K  T  N  W  M  H  L  S  Q  K  G  T  R  C  S  H  P         p.840

          .   | 14     .         .         .         .         .    g.12703
 CGCATCACGCAG | ATCCACCCTCTCGTGGGGCCCAAGGAAGGAGGCACCCGGGTCACCATC    c.2580
 R  I  T  Q   | I  H  P  L  V  G  P  K  E  G  G  T  R  V  T  I      p.860

          .         .         .         .         .         .       g.12763
 GTGGGTGACAACCTGGGCCTCTTGTCCCGAGAGGTGGGCCTGCGGGTGGCTGGCGTGCGT       c.2640
 V  G  D  N  L  G  L  L  S  R  E  V  G  L  R  V  A  G  V  R         p.880

          .         .         .         | 15         .         .    g.12892
 TGCAACTCCATTCCGGCCGAGTACATCAGTGCTGAGAG | GATCGTGTGTGAGATGGAGGAG    c.2700
 C  N  S  I  P  A  E  Y  I  S  A  E  R  |  I  V  C  E  M  E  E      p.900

          .         .         .         .         .         .       g.12952
 TCGCTGGTGCCCAGCCCGCCGCCGGGGCCCGTGGAGCTGTGTGTGGGTGACTGTTCAGCC       c.2760
 S  L  V  P  S  P  P  P  G  P  V  E  L  C  V  G  D  C  S  A         p.920

          .         .         .          | 16        .         .    g.13117
 GACTTCCGCACGCAGTCGGAGCAGGTCTACAGCTTTGTG | ACCCCAACGTTTGACCAAGTG    c.2820
 D  F  R  T  Q  S  E  Q  V  Y  S  F  V   | T  P  T  F  D  Q  V      p.940

          .         .         .         .         .         .       g.13177
 AGTCCCAGCCGTGGCCCGGCGTCCGGGGGCACACGGCTTACCATCTCAGGCAGCTCTCTG       c.2880
 S  P  S  R  G  P  A  S  G  G  T  R  L  T  I  S  G  S  S  L         p.960

          .         .         .         .         .       | 17 .    g.13347
 GATGCTGGCAGCAGGGTCACAGTGACTGTGAGGGACAGCGAGTGCCAGTTTGTAAG | GAGA    c.2940
 D  A  G  S  R  V  T  V  T  V  R  D  S  E  C  Q  F  V  R  |  R      p.980

          .         .         .         .         .         .       g.13407
 GATGCCAAGGCGATCGTGTGCATCTCACCTCTCTCCACCCTGGGCCCCAGCCAGGCCCCC       c.3000
 D  A  K  A  I  V  C  I  S  P  L  S  T  L  G  P  S  Q  A  P         p.1000

          .         .         .         .         .         .       g.13467
 ATCACACTTGCCATTGACCGGGCTAACATCTCCAGCCCCGGGCTCATCTACACCTACACT       c.3060
 I  T  L  A  I  D  R  A  N  I  S  S  P  G  L  I  Y  T  Y  T         p.1020

          .         .         .         .        | 18.         .    g.13790
 CAGGACCCCACCGTCACCCGCCTTGAGCCCACCTGGAGCATCATCAA | TGGAAGCACTGCC    c.3120
 Q  D  P  T  V  T  R  L  E  P  T  W  S  I  I  N  |  G  S  T  A      p.1040

          .         .         .         .         .         .       g.13850
 ATCACTGTGAGTGGGACCCACCTGCTGACGGTCCAGGAGCCCCGGGTCCGTGCCAAGTAC       c.3180
 I  T  V  S  G  T  H  L  L  T  V  Q  E  P  R  V  R  A  K  Y         p.1060

          .         .  | 19      .         .         .         .    g.13991
 CGCGGCATTGAGACCACCAAT | ACATGCCAAGTGATCAACGACACTGCCATGCTGTGTAAG    c.3240
 R  G  I  E  T  T  N   | T  C  Q  V  I  N  D  T  A  M  L  C  K      p.1080

          .         .         .         .         .         .       g.14051
 GCCCCCGGCATCTTTCTTGGGCGGCCCCAGCCTCGGGCGCAAGGCGAGCACCCTGATGAG       c.3300
 A  P  G  I  F  L  G  R  P  Q  P  R  A  Q  G  E  H  P  D  E         p.1100

          .         .         .         .         .         .       g.14111
 TTTGGCTTCCTGCTGGACCACGTGCAAACGGCCCGCTCCCTCAACCGCTCCTCCTTTACC       c.3360
 F  G  F  L  L  D  H  V  Q  T  A  R  S  L  N  R  S  S  F  T         p.1120

          .         .         .         .         .         .       g.14171
 TACTACCCTGATCCCAGCTTTGAGCCGCTGGGGCCCTCTGGCGTGCTGGACGTCAAACCG       c.3420
 Y  Y  P  D  P  S  F  E  P  L  G  P  S  G  V  L  D  V  K  P         p.1140

          .         .  | 20      .         .         .         .    g.14304
 GGCTCCCACGTGGTGCTGAAG | GGCAAGAACCTGATTCCCGCGGCAGCCGGCAGCTCCCGC    c.3480
 G  S  H  V  V  L  K   | G  K  N  L  I  P  A  A  A  G  S  S  R      p.1160

          .         .         .         .         .         .       g.14364
 CTCAACTACACTGTGCTGATAGGAGGCCAGCCGTGTTCGCTCACTGTCTCGGACACACAA       c.3540
 L  N  Y  T  V  L  I  G  G  Q  P  C  S  L  T  V  S  D  T  Q         p.1180

          .         .         .         .      | 21  .         .    g.14502
 CTCCTGTGCGACTCACCCAGCCAGACTGGCCGGCAGCCTGTCATG | GTGCTGGTGGGTGGC    c.3600
 L  L  C  D  S  P  S  Q  T  G  R  Q  P  V  M   | V  L  V  G  G      p.1200

          .         .         .         .         .         .       g.14562
 CTGGAGTTCTGGCTGGGCACCCTGCACATCTCGGCAGAGCGGGCGCTGACCCTACCGGCC       c.3660
 L  E  F  W  L  G  T  L  H  I  S  A  E  R  A  L  T  L  P  A         p.1220

          .         .         .         .         .         .       g.14622
 ATGATGGGGCTGGCGGCGGGGGGTGGGCTCCTGCTGCTGGCCATCACAGCCGTGCTGGTG       c.3720
 M  M  G  L  A  A  G  G  G  L  L  L  L  A  I  T  A  V  L  V         p.1240

          .         .         .         .         .         .       g.14682
 GCGTACAAGCGCAAGACTCAGGACGCGGACCGTACCCTCAAGCGTCTGCAGCTGCAGATG       c.3780
 A  Y  K  R  K  T  Q  D  A  D  R  T  L  K  R  L  Q  L  Q  M         p.1260

          .         .         .         . | 22       .         .    g.14822
 GACAACCTGGAGTCCCGTGTGGCCCTGGAGTGCAAGGAAG | CTTTTGCAGAGCTGCAGACG    c.3840
 D  N  L  E  S  R  V  A  L  E  C  K  E  A |   F  A  E  L  Q  T      p.1280

          .         .         .         .         .         .       g.14882
 GACATCAATGAGCTGACTAACCACATGGACGAGGTGCAGATCCCCTTCCTGGACTACCGG       c.3900
 D  I  N  E  L  T  N  H  M  D  E  V  Q  I  P  F  L  D  Y  R         p.1300

          .         .         .         .         .         .       g.14942
 ACTTACGCCGTGCGCGTGCTCTTCCCGGGCATCGAGGCCCACCCGGTGCTCAAGGAGCTG       c.3960
 T  Y  A  V  R  V  L  F  P  G  I  E  A  H  P  V  L  K  E  L         p.1320

     | 23    .         .         .         .         .         .    g.15080
 GAT | ACGCCACCCAACGTGGAGAAGGCCCTGCGCCTCTTCGGGCAGCTGCTGCACAGCCGC    c.4020
 D   | T  P  P  N  V  E  K  A  L  R  L  F  G  Q  L  L  H  S  R      p.1340

          .         .         .         .         .         .       g.15140
 GCGTTCGTGCTTACCTTCATCCACACGCTGGAGGCCCAGAGCAGCTTCTCCATGCGCGAC       c.4080
 A  F  V  L  T  F  I  H  T  L  E  A  Q  S  S  F  S  M  R  D         p.1360

          .         .         .         .         .         .       g.15200
 CGCGGCACCGTGGCCTCGCTCACCATGGTGGCCCTGCAGAGCCGGCTCGACTATGCCACG       c.4140
 R  G  T  V  A  S  L  T  M  V  A  L  Q  S  R  L  D  Y  A  T         p.1380

          .         .         .         .         .         .       g.15260
 GGGCTGCTCAAGCAACTGCTGGCCGACCTCATCGAGAAGAACCTCGAGAGCAAGAACCAC       c.4200
 G  L  L  K  Q  L  L  A  D  L  I  E  K  N  L  E  S  K  N  H         p.1400

          .         . | 24       .         .         .         .    g.15423
 CCCAAGCTGCTGCTACGCAG | GACAGAGTCAGTGGCTGAGAAGATGCTTACCAACTGGTTC    c.4260
 P  K  L  L  L  R  R  |  T  E  S  V  A  E  K  M  L  T  N  W  F      p.1420

          .         .        | 25.         .         .         .    g.15576
 ACGTTCCTGCTGCATAAGTTTCTGAAG | GAGTGTGCTGGGGAGCCTCTCTTCCTGCTTTAC    c.4320
 T  F  L  L  H  K  F  L  K   | E  C  A  G  E  P  L  F  L  L  Y      p.1440

          .         .         .         .         .         .       g.15636
 TGTGCCATCAAGCAGCAGATGGAGAAGGGCCCCATTGATGCCATCACGGGCGAGGCACGA       c.4380
 C  A  I  K  Q  Q  M  E  K  G  P  I  D  A  I  T  G  E  A  R         p.1460

          .         .         .         .         .     | 26   .    g.15782
 TACTCCCTGAGCGAGGACAAGCTCATCCGTCAGCAGATCGACTACAAGACACTG | ACCCTT    c.4440
 Y  S  L  S  E  D  K  L  I  R  Q  Q  I  D  Y  K  T  L   | T  L      p.1480

          .         .         .         .         .         .       g.15842
 CACTGCGTGTGTCCGGAGAACGAGGGCAGCGCCCAGGTCCCAGTGAAGGTTCTCAACTGT       c.4500
 H  C  V  C  P  E  N  E  G  S  A  Q  V  P  V  K  V  L  N  C         p.1500

          .         .         .         .         .         .       g.15902
 GACAGCATCACCCAGGCCAAAGATAAGCTGCTGGACACTGTGTACAAGGGCATTCCGTAC       c.4560
 D  S  I  T  Q  A  K  D  K  L  L  D  T  V  Y  K  G  I  P  Y         p.1520

          .         .         .     | 27   .         .         .    g.16125
 TCCCAGCGTCCCAAAGCTGAGGACATGGACCTGG | AGTGGCGCCAGGGCCGCATGACTCGC    c.4620
 S  Q  R  P  K  A  E  D  M  D  L  E |   W  R  Q  G  R  M  T  R      p.1540

          .         .         .         .         .         .       g.16185
 ATCATCCTCCAGGATGAGGATGTCACCACCAAGATCGAGTGTGACTGGAAGAGGCTCAAC       c.4680
 I  I  L  Q  D  E  D  V  T  T  K  I  E  C  D  W  K  R  L  N         p.1560

          .         | 28         .         .         .         .    g.16450
 TCACTGGCCCACTACCAG | GTGACAGACGGTTCCTTGGTGGCATTGGTGCCCAAACAAGTG    c.4740
 S  L  A  H  Y  Q   | V  T  D  G  S  L  V  A  L  V  P  K  Q  V      p.1580

          .         .         .         .         .      | 29  .    g.16702
 TCTGCCTATAACATGGCCAACTCCTTCACCTTCACCCGCTCCCTCAGCCGCTACG | AGAGC    c.4800
 S  A  Y  N  M  A  N  S  F  T  F  T  R  S  L  S  R  Y  E |   S      p.1600

          .         .         .         .         .         .       g.16762
 TTGCTCCGCACGGCCAGCAGCCCTGATAGCCTCCGCTCACGGGCACCCATGATTACGCCT       c.4860
 L  L  R  T  A  S  S  P  D  S  L  R  S  R  A  P  M  I  T  P         p.1620

          .         .         .         .         .         .       g.16822
 GACCAGGAGACAGGCACCAAATTGTGGCACCTGGTGAAAAACCACGACCATGCCGACCAT       c.4920
 D  Q  E  T  G  T  K  L  W  H  L  V  K  N  H  D  H  A  D  H         p.1640

          .         .         .         .         .         .       g.16882
 CGCGAGGGGGACCGTGGCAGCAAGATGGTCTCCGAGATCTACCTGACACGGCTGCTGGCC       c.4980
 R  E  G  D  R  G  S  K  M  V  S  E  I  Y  L  T  R  L  L  A         p.1660

        | 30 .         .         .         .         .         .    g.17216
 ACCAAG | GGCACACTGCAGAAGTTCGTGGATGACCTCTTTGAGACAGTGTTCAGCACAGCC    c.5040
 T  K   | G  T  L  Q  K  F  V  D  D  L  F  E  T  V  F  S  T  A      p.1680

          .         .         .         .         .         .       g.17276
 CACCGGGGCTCGGCCCTGCCCCTGGCCATCAAGTACATGTTCGACTTCCTGGATGAGCAG       c.5100
 H  R  G  S  A  L  P  L  A  I  K  Y  M  F  D  F  L  D  E  Q         p.1700

          .         .         .         .         .       | 31 .    g.17829
 GCGGACCAGCGCCAGATCAGCGACCCCGATGTGCGCCACACCTGGAAGAGCAACTG | CCTG    c.5160
 A  D  Q  R  Q  I  S  D  P  D  V  R  H  T  W  K  S  N  C  |  L      p.1720

          .         .         .         .         .         .       g.17889
 CCGCTGCGCTTCTGGGTGAATGTGATCAAGAACCCGCAGTTCGTGTTCGACATCCACAAG       c.5220
 P  L  R  F  W  V  N  V  I  K  N  P  Q  F  V  F  D  I  H  K         p.1740

          .         .         .         .         .         .       g.17949
 AACAGCATCACGGATGCCTGCCTGTCGGTGGTAGCCCAGACCTTCATGGACTCCTGCTCT       c.5280
 N  S  I  T  D  A  C  L  S  V  V  A  Q  T  F  M  D  S  C  S         p.1760

          .         .         .         .         .         .       g.18009
 ACATCCGAGCACCGCCTGGGGAAGGACTCGCCCTCCAACAAACTGCTCTACGCCAAGGAC       c.5340
 T  S  E  H  R  L  G  K  D  S  P  S  N  K  L  L  Y  A  K  D         p.1780

          .         .          | 32        .         .         .    g.18239
 ATCCCCAACTACAAGAGCTGGGTGGAGAG | GTATTATCGAGACATTGCAAAGATGGCATCC    c.5400
 I  P  N  Y  K  S  W  V  E  R  |  Y  Y  R  D  I  A  K  M  A  S      p.1800

          .         .         .         .         .         .       g.18299
 ATCAGCGACCAGGACATGGATGCCTACCTGGTGGAGCAGTCCCGCCTCCACGCCAGCGAC       c.5460
 I  S  D  Q  D  M  D  A  Y  L  V  E  Q  S  R  L  H  A  S  D         p.1820

          .         .         .         .         .         .       g.18359
 TTCAGCGTCCTGAGTGCGCTCAACGAGCTGTATTTCTATGTCACCAAGTACCGCCAGGAG       c.5520
 F  S  V  L  S  A  L  N  E  L  Y  F  Y  V  T  K  Y  R  Q  E         p.1840

  | 33       .         .         .         .         .         .    g.19370
  | ATTCTCACGGCTCTGGACCGAGATGCCTCTTGTCGGAAGCATAAGTTGCGGCAGAAACTG    c.5580
  | I  L  T  A  L  D  R  D  A  S  C  R  K  H  K  L  R  Q  K  L      p.1860

          .         .         .                                     g.19406
 GAACAGATCATCAGCCTCGTGTCCAGCGACAGCTAA                               c.5616
 E  Q  I  I  S  L  V  S  S  D  S  X                                 p.1871

          .         .         .         .         .         .       g.19466
 ggtggtggaatcggtgaggagggggcttctcagtcctgtgccgtcctcccatccagggga       c.*60

          .         .         .         .         .         .       g.19526
 gtggctggctcaagcctgggtccccgggctgagccctggattgggtatcgtggggcaggt       c.*120

          .         .         .         .         .         .       g.19586
 caccctggccacgatgcccccggcacacccaggcccccttcattagtgccttgctttggg       c.*180

          .         .         .         .         .         .       g.19646
 ccctgcagggggaggggtgacagggcgagcccccaccccagcagcagcaatacccccacc       c.*240

          .         .         .         .         .         .       g.19706
 ctcctgccctgtgcccaggtgttgggacagtcccaccctccctgctatttatatccctct       c.*300

          .         .         .         .         .         .       g.19766
 gcctatttattgaatcgaacttcgcctctgtctccatctgtaaatatgtgtccccccacc       c.*360

          .         .         .         .         .         .       g.19826
 ggatgtcgccaccctcactcacctgcctcttcttgagctgtcctgggccctgccacccgt       c.*420

          .         .         .         .         .         .       g.19886
 ctgggctcctttgtgtagcattatcagcctcggtctggcctctggcacctcacccttgcc       c.*480

          .         .         .         .         .         .       g.19946
 atggctgaccccacccattccaaggcggggtcacggtaccagcagcacttggggtgaggc       c.*540

          .         .         .         .         .         .       g.20006
 ctccaaagcttcctcagaattgtggctgtgccacgctggaccacagggtccccctcaagc       c.*600

          .         .         .         .         .         .       g.20066
 atctcggggccctattctctctgagcacctggagggctggactcaggcttgtgccagggc       c.*660

          .         .         .         .         .         .       g.20126
 ctgacttgggcctgggggccctagaacactcctcctcctgagcctactgccaaacgtcct       c.*720

          .         .         .         .         .         .       g.20186
 cagtgttgtctgcacctgctccgactccttcagccgccccattcagcgcccgctccgtcc       c.*780

          .         .         .         .         .         .       g.20246
 agtgcccgccctgtggggccaaggcggccgtgccttactactctgtgtcttctgcctcct       c.*840

          .         .         .         .         .         .       g.20306
 ctgaggaatctggccctgtctgacagtcccagaccccccgttctctcctctttagttgca       c.*900

          .         .         .         .         .                 g.20363
 tgagtttttctttgttcatggaatgttttttcctgattaaatgttggggaaatgcca          c.*957

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Plexin A3 protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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