(used for variant description)
(last modified September 4, 2016)
This file was created to facilitate the description of sequence variants on transcript NM_002734.4 in the PRKAR1A gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000017.10, covering PRKAR1A transcript NM_002734.4.
(upstream sequence)
. . . . . g.5466
attgacgtcagtagccgaacgctgattggctgcggccaggccgtttccggtggagc c.-121
. . . . . . g.5526
tgtcgcctagccgctatcgcagagtggagcggggctgggagcaaagcgctgagggagctc c.-61
. . . . . . | 02 g.8431
ggtacgccgccgcctcgcacccgcagcctcgcgcccgccgccgcccgtccccag | agaacc c.-1
. . . . . . g.8491
ATGGAGTCTGGCAGTACCGCCGCCAGTGAGGAGGCACGCAGCCTTCGAGAATGTGAGCTC c.60
M E S G S T A A S E E A R S L R E C E L p.20
. . . . . . g.8551
TACGTCCAGAAGCATAACATTCAAGCGCTGCTCAAAGATTCTATTGTGCAGTTGTGCACT c.120
Y V Q K H N I Q A L L K D S I V Q L C T p.40
. . . . . | 03. g.15790
GCTCGACCTGAGAGACCCATGGCATTCCTCAGGGAATACTTTGAGAGGTTGGAGAAG | GAG c.180
A R P E R P M A F L R E Y F E R L E K | E p.60
. . . . . . g.15850
GAGGCAAAACAGATTCAGAATCTGCAGAAAGCAGGCACTCGTACAGACTCAAGGGAGGAT c.240
E A K Q I Q N L Q K A G T R T D S R E D p.80
. . . . . . g.15910
GAGATTTCTCCTCCTCCACCCAACCCAGTGGTTAAAGGTAGGAGGCGACGAGGTGCTATC c.300
E I S P P P P N P V V K G R R R R G A I p.100
. . . . | 04 . g.16768
AGCGCTGAGGTCTACACGGAGGAAGATGCGGCATCCTATGTTAGAAAG | GTTATACCAAAA c.360
S A E V Y T E E D A A S Y V R K | V I P K p.120
. . . . . . g.16828
GATTACAAGACAATGGCCGCTTTAGCCAAAGCCATTGAAAAGAATGTGCTGTTTTCACAT c.420
D Y K T M A A L A K A I E K N V L F S H p.140
. . | 05 . . . . g.17087
CTTGATGATAATGAGAGAAG | TGATATTTTTGATGCCATGTTTTCGGTCTCCTTTATCGCA c.480
L D D N E R S | D I F D A M F S V S F I A p.160
. . | 06 . . . . g.17981
GGAGAGACTGTGATTCAGCAAG | GTGATGAAGGGGATAACTTCTATGTGATTGATCAAGGA c.540
G E T V I Q Q G | D E G D N F Y V I D Q G p.180
| 07 . . . . . g.18836
GAGACGGAT | GTCTATGTTAACAATGAATGGGCAACCAGTGTTGGGGAAGGAGGGAGCTTT c.600
E T D | V Y V N N E W A T S V G E G G S F p.200
. . . . . . g.18896
GGAGAACTTGCTTTGATTTATGGAACACCGAGAGCAGCCACTGTCAAAGCAAAGACAAAT c.660
G E L A L I Y G T P R A A T V K A K T N p.220
. . . . | 08 . g.20883
GTGAAATTGTGGGGCATCGACCGAGACAGCTATAGAAGAATCCTCATG | GGAAGCACACTG c.720
V K L W G I D R D S Y R R I L M | G S T L p.240
. . . . | 09 . g.21912
AGAAAGCGGAAGATGTATGAGGAATTCCTTAGTAAAGTCTCTATTTTAG | AGTCTCTGGAC c.780
R K R K M Y E E F L S K V S I L E | S L D p.260
. . . . . . g.21972
AAGTGGGAACGTCTTACGGTAGCTGATGCATTGGAACCAGTGCAGTTTGAAGATGGGCAG c.840
K W E R L T V A D A L E P V Q F E D G Q p.280
. . . . . | 10 . g.22960
AAGATTGTGGTGCAGGGAGAACCAGGGGATGAGTTCTTCATTATTTTAGAG | GGGTCAGCT c.900
K I V V Q G E P G D E F F I I L E | G S A p.300
. . . . . . g.23020
GCTGTGCTACAACGTCGGTCAGAAAATGAAGAGTTTGTTGAAGTGGGAAGATTGGGGCCT c.960
A V L Q R R S E N E E F V E V G R L G P p.320
. | 11 . . . . . g.23355
TCTGATTATTTTG | GTGAAATTGCACTACTGATGAATCGTCCTCGTGCTGCCACAGTTGTT c.1020
S D Y F G | E I A L L M N R P R A A T V V p.340
. . . . . . g.23415
GCTCGTGGCCCCTTGAAGTGCGTTAAGCTGGACCGACCTAGATTTGAACGTGTTCTTGGC c.1080
A R G P L K C V K L D R P R F E R V L G p.360
. . . . . . g.23475
CCATGCTCAGACATCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCACTGTCT c.1140
P C S D I L K R N I Q Q Y N S F V S L S p.380
g.23481
GTCTGA c.1146
V X p.381
. . . . . . g.23541
aatctgcctcctgtgcctcccttttctcctctccccaatccatgcttcactcatgcaaac c.*60
. . . . . . g.23601
tgctttattttccctacttgcagcgccaagtggccactggcatcgcagcttcctgtctgt c.*120
. . . . . . g.23661
ttatatattgaaagttgcttttattgcaccattttcaatttggagcattaactaaatgct c.*180
. . . . . . g.23721
catacacagttaaataaatagaaagagttctatggagactttgctgttactgcttctctt c.*240
. . . . . . g.23781
tgtgcagtgttagtattcaccctgggcagtgagtgccatgctttttggtgagggcagatc c.*300
. . . . . . g.23841
ccagcacctattgaattaccatagagtaatgatgtaacagtgcaagattttttttttaag c.*360
. . . . . . g.23901
tgacataattgtccagttataagcgtatttagactgtggccatatatgctgtatttcttt c.*420
. . . . . . g.23961
gtagaataaatggtttctcattaaactctaaagattagggaaaatggatatagaaaatct c.*480
. . . . . . g.24021
tagtatagtagaaagacatctgcctgtaattaaactagtttaagggtggaaaaatgccca c.*540
. . . . . . g.24081
tttttgctaattatcaatgggatatgattggttcagtttttttttttccagagttgttgt c.*600
. . . . . . g.24141
ttgccaagctaatctgcctggttttatttatatcttgttattaatgtttcttctccaatt c.*660
. . . . . . g.24201
ctgaaatacttttgagtatggctatctatacctgccttttaagtttgaaactaactcata c.*720
. . . . . . g.24261
gattgcaaatattggttagtatttaactacatctgcctcggctcacaaattccgattaga c.*780
. . . . . . g.24321
cctttatccagctagtgccaaataattgatcagatgctgaattgagaataagaatttgag c.*840
. . . . . . g.24381
gtctacattcttggttgttaatttagagcgtttggttaaagtatgtccttcagctgactc c.*900
. . . . . . g.24441
cagtataatctcctctgctcattaaactgattccaggagattggatttgctgtgactaga c.*960
. . . . . . g.24501
tacagatggagcaaatgtcctaacagagaaatagaggtgatgctgctaaagggagaaatg c.*1020
. . . . . . g.24561
ccaggcggacaaagttcagtgtcgggaattttccccgtgacattcactggggcatgagat c.*1080
. . . . . . g.24621
tttggaagaagttttttactttggtttagtctttttttccttcctttttattcagctaga c.*1140
. . . . . . g.24681
atttctggtgggttgatggtagggtataatgtgtctgtgttgcttcaaattggtctgaaa c.*1200
. . . . . . g.24741
ggctatcctgctgaaagtcctgctttcctatctagcatttatttctctggcaaacttttc c.*1260
. . . . . . g.24801
tttcttttcttttttaaagtaaacttgtgtattgagtcttaactgtatttcagtattttc c.*1320
. . . . . . g.24861
cagccttatgtgttacattattccaatgatacccaacagtttatttttattattttttta c.*1380
. . . . . . g.24921
aacaaaatttcacagttctgtaatgtaggcacttttattttcattgtgatttatatataa c.*1440
. . . . . . g.24981
ggtaatgtagggttatatttgggagtgactgcaagcatttttccatctgtgtgcaactaa c.*1500
. . . . . . g.25041
ctgactctgttattgatcccttctcctgccctttcccaggtaatttaaattggtcatggt c.*1560
. . . . . . g.25101
agatttttttcatagatttgaaaaacttttaggttgttaccaagtatgaagtataaatct c.*1620
. . . . . . g.25161
ggggaagaggttttatttacattttagggtgggtaagaaagccaccttgttacaaatttt c.*1680
. . . . . . g.25221
ttaatttccaaaataatctatattaaatgagggtttctgatctgtactttgtgtttagct c.*1740
. . . . . . g.25281
acctttttatatttaaaaaattaaaaatgaaaattacgttcttacaagcttaaagcttga c.*1800
. . . . . . g.25341
tttgatctttgtttaaatgccaaaatgtacttaaatgagttacttagaatgccataaaat c.*1860
. . . . . . g.25401
tgcagtttcatgtatgtatataatcatgctcatgtatatttagttacgtataatgctttc c.*1920
. . . . . . g.25461
tgagtgagttttactcttaaatcatttggttaaatcatttggcttgctgtttactccctt c.*1980
. . . . . . g.25521
ctgtagtttttaattaaaaactttaaagataagtctacattaaacaatgatcacatctaa c.*2040
. . . . . . g.25581
agctttatctttgtgtaatctaagtatatgtgagaaatcagaattggcataatttgtctt c.*2100
. . . . . . g.25641
agttgatattcaaggctttaaaagtcattattcctgggcttggtaagtgaatttatgaga c.*2160
. . . . . . g.25701
tttactgctctagaaagtatagatggccaaaggaccgttttgtattgcttcctgattacc c.*2220
. . . . . . g.25761
agtctgattataccatgtgtgctaatatactttttttgttatagattgtcttaatggtag c.*2280
. . . . . . g.25821
gtcaagtaataaaaagagatgaaataatttaaattcttaaatgaatcagtttttcttccc c.*2340
. . . . . . g.25881
tttctcctttccgtctttcctctctctgtccttccccgaaagtctactcgggtgggcaaa c.*2400
. . . . . . g.25941
aatgaaaagggggaaagtgaattatgggatcggtgttttgaaagagcaatgtttattttc c.*2460
. . . . . . g.26001
agtgcttttcagtttgtcaaagagtggatctcaaaatcttgcttaaagggtaattgagat c.*2520
. . . . . . g.26061
gtagcagatttatttacttagtcatggaaagaaaaaaattcagtcaaaagctaaagattt c.*2580
. . . . . . g.26121
ccttttgattgaagacagattggttctgtggccttggaactttcccagacttaatgggga c.*2640
. . . . . . g.26181
aacatcatttctagattagcatactctttggtttaaatttaatatatacatttaatgtta c.*2700
. . . . . . g.26241
cttagggatacttttatattttgcatatataaagcctcatatataaagccttatttctga c.*2760
. . . . . . g.26301
tgctcttagatttctgaggagtgagatgattaagttgtattcattagtgtattggtattt c.*2820
. . . . . . g.26361
cttcacatccagtgaaattggagatatgttgtatgttagaagagcattctttaaattgtg c.*2880
. . . . . . g.26421
ttgctttgaacatgtgtaccttttctagattcagtaatcccttccccccgtcctctggag c.*2940
. . . . g.26463
tatgaaacctttagagtcacaataaaatgtaactaaagaaaa c.*2982
(downstream sequence)
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