patched 2 (PTCH2) - 9505 nt intron 02 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.6158
gtaagttgtggacactggccatagctgctcaggtatggtgagcccaagacaagaacgggg  c.265+60

         .         .         .         .         .         .  g.6218
tgaggagctggctactgagctctagcaggcctggccctggggctggagggtcacctgctg  c.265+120

         .         .         .         .         .         .  g.6278
gccagagtcctacacctgggcatctaggaacaccgttccctcccacaaccataaatggac  c.265+180

         .         .         .         .         .         .  g.6338
atctgcagatgttagaccttgtgaattgggtgtatagaatatttgtctgtgattttgtac  c.265+240

         .         .         .         .         .         .  g.6398
gttagcatttattgctaactttctatgtgtgtctttgacaatgcatcagggttttacaaa  c.265+300

         .         .         .         .         .         .  g.6458
ggcagctaaaacaagattcatctttcagtagcaaagaaagtaaaatatgtgctggaataa  c.265+360

         .         .         .         .         .         .  g.6518
ctaaaatacaatacagagcatcctgtgattatgtggtataagatagggtagggagaaatc  c.265+420

         .         .         .         .         .         .  g.6578
acttctgaccagcagaatcagaaaagttagaactagaaggctggggaaactgagtaaata  c.265+480

         .         .         .         .         .         .  g.6638
atctggccaagcctgcagggagaggactcaggcacccaggcccatttaatggaaaagcaa  c.265+540

         .         .         .         .         .         .  g.6698
tacagaatccacactttgaggcaatagccagggtcagatggaatcaaatcctcactttct  c.265+600

         .         .         .         .         .         .  g.6758
taaggaagcataaaagaagaatgattttcttggggtttttttttggggggggttgttttt  c.265+660

         .         .         .         .         .         .  g.6818
ttgtttgtttgtttgtttgagacagagtctttctctgtcacccaggctggagtgcagtgg  c.265+720

         .         .         .         .         .         .  g.6878
tgcgatcctggatcactacaacctcacttcccgggttcaagtgattctcgtgcctcagcc  c.265+780

         .         .         .         .         .         .  g.6938
tccaagtagctgggatcacaggtgcccaccaacacacccggctaatttttgtatttttag  c.265+840

         .         .         .         .         .         .  g.6998
tagagacagcctagacctccagggctcaggtcctcccacctcagcctcccaagtagctgg  c.265+900

         .         .         .         .         .         .  g.7058
gattacaggcgtgcgccaccacacccagctaatttttgttttgttttgttttggagacag  c.265+960

         .         .         .         .         .         .  g.7118
aatctcactctgtcacccaggctggagtgcagtggtgtgatctcagctcagtgcaacctc  c.265+1020

         .         .         .         .         .         .  g.7178
cacctcccagggtcaagtgattcttgtgcctcagccacctaagtagctgggactacaggc  c.265+1080

         .         .         .         .         .         .  g.7238
ataagccaccacaccctgataatttttgggtttttggttttttgttttttttttgagaca  c.265+1140

         .         .         .         .         .         .  g.7298
gagtctcactctgtctcatccaagctggagtttagtggcttgatatcgtctcactgcaac  c.265+1200

         .         .         .         .         .         .  g.7358
ctctgcctcccaggttcaaacgattctcctgcctcagcctccaaagtagctgagattaca  c.265+1260

         .         .         .         .         .         .  g.7418
ggtgggcgacaccatgcctggctaatttttgtattattagtagagaccaggtttcaccat  c.265+1320

         .         .         .         .         .         .  g.7478
gttggccaggctggtctcgaactcctggcttcaagtaatccgctcacctcagcctcccaa  c.265+1380

         .         .         .         .         .         .  g.7538
agtgctgggattacaggtgtgagccaccgtgcctggccagaatgatttctcattaataat  c.265+1440

         .         .         .         .         .         .  g.7598
ttcagcaggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccggggc  c.265+1500

         .         .         .         .         .         .  g.7658
gggcggatcaaaggtcaggagttcaagaccaacctggccaacataataaaaccccatctc  c.265+1560

         .         .         .         .         .         .  g.7718
tactaaaaatacaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctacttg  c.265+1620

         .         .         .         .         .         .  g.7778
ggaagcggagacaggagaattgcttgaacctgggaggcggaggttgcagtgagccaagat  c.265+1680

         .         .         .         .         .         .  g.7838
cgccgcactgcactccagcctgggcagcagagggagattccatctcaaaaaaaaaaaaaa  c.265+1740

         .         .         .         .         .         .  g.7898
aaaaatttcagcatgactctcttctttcctgagggctggtttcatatggcagccctttga  c.265+1800

         .         .         .         .         .         .  g.7958
taggagtcaaactccagtctgtttttccctgggaaatttgcattttgtagactccctcag  c.265+1860

         .         .         .         .         .         .  g.8018
ccctggcccatacccaaaggcagaacccaggttggagtctcacaccctcgagttatttca  c.265+1920

         .         .         .         .         .         .  g.8078
aatactggcaagtcctaggatccacagcagatgtttctcagagcttgcctgcctgttgag  c.265+1980

         .         .         .         .         .         .  g.8138
ctcccacacgccatccccaccctacctacccccagccctgcagactctcacatccatata  c.265+2040

         .         .         .         .         .         .  g.8198
cactctaggccagccctggggtccagagcagatgtctcgctctgcctgcctgcccccagc  c.265+2100

         .         .         .         .         .         .  g.8258
cccaggacacagatgtgcatacacgcacatacacatatccccacccacaccactgctgcc  c.265+2160

         .         .         .         .         .         .  g.8318
tgggtggtcccagatgactcttggatttcctgccccaacagaggcagtctcccttccctt  c.265+2220

         .         .         .         .         .         .  g.8378
cctccctctccattccccacattctccccatctaaacactgcttgagcctccatgtttcc  c.265+2280

         .         .         .         .         .         .  g.8438
tcatcctctctcctatactccagcataggataggctagaccccagcagttttttgctgtt  c.265+2340

         .         .         .         .         .         .  g.8498
gtttgggggagggttttataagaggatggtagccaattcctaggcttttttcctttattt  c.265+2400

         .         .         .         .         .         .  g.8558
cagaatatcactcttgtcctatattggctgggggtgaggtaaaaatctttttttttcttt  c.265+2460

         .         .         .         .         .         .  g.8618
ctgttttttttttttttttttttttgagagtaagtcttgctctgttgcccaggctgtagt  c.265+2520

         .         .         .         .         .         .  g.8678
gcagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagcgattctccag  c.265+2580

         .         .         .         .         .         .  g.8738
agtagctgacactataggcatgcgccaccatgcccggctaatttttttgtatttttagta  c.265+2640

         .         .         .         .         .         .  g.8798
gaaacagggtgtcaccatgttggccatgctggcctcgatctcctgaccttgtgatccgcc  c.265+2700

         .         .         .         .         .         .  g.8858
cgccttggcctcccaaagtgctgggattacaggcctgagccagacgctaggccaatcttt  c.265+2760

         .         .         .         .         .         .  g.8918
tttttcatagagatggagtctcactgtgagacccagtctcaaagaaaaagtgtaagaagg  c.265+2820

         .         .         .         .         .         .  g.8978
cagggtgcagtggctcacgcctgtaatcccagcacttcgggaggccgaagtaggtggatc  c.265+2880

         .         .         .         .         .         .  g.9038
tcctgaggtcaggagttcaacaccagcctggctagcctggctaacttggtgaaactccat  c.265+2940

         .         .         .         .         .         .  g.9098
ctctactaaaaatacaaaaattagccaagtgcggtggttcgcgcctgtagtcccagctac  c.265+3000

         .         .         .         .         .         .  g.9158
tccagaggctgaggcaggagaatcgcttgagcccaggaggcagaggttgcagtgggccaa  c.265+3060

         .         .         .         .         .         .  g.9218
gatcgtgccactgcactctagcctggcgacagagcgagactcaaaaaaaaaaaaaaagaa  c.265+3120

         .         .         .         .         .         .  g.9278
aagaaaaagaaagattaagccgaggaagaaaccgaacattggctatcacagtgttccaga  c.265+3180

         .         .         .         .         .         .  g.9338
ccagagttcagggtcctccttaactttgcctcagtgagacttggaatttgacttgtttgt  c.265+3240

         .         .         .         .         .         .  g.9398
ctttcctggccaactgtaaagtcaagcgttcagaggcagattgttctctaaaatgaaaat  c.265+3300

         .         .         .         .         .         .  g.9458
tacaaaggcctggcacggtggctcacgcctgtaatcctagcactttgggaggccgaagcg  c.265+3360

         .         .         .         .         .         .  g.9518
ggtggatcacttgaggtcaagagtttgagaccagcctgaccaacatggtgaaacactgtc  c.265+3420

         .         .         .         .         .         .  g.9578
tctactccaaatacaaaattagccaggcgtggtggtgcatgcctgtaatcccagctactg  c.265+3480

         .         .         .         .         .         .  g.9638
gggaggctgtggcaggagaatcgcttgaacccgggaggcagagtttgcagtgagccgaga  c.265+3540

         .         .         .         .         .         .  g.9698
tcgcgtctttgtactccagcctgcgcaacaagagctgccattccatgtagaagacagagg  c.265+3600

         .         .         .         .         .         .  g.9758
atggccttatatcagttggtagaatcaccatccacttaaatacctaaagctaaaacctta  c.265+3660

         .         .         .         .         .         .  g.9818
ggagtcagcctcagttcttgttcacccaattgtttactaaactattaaatccttgcttct  c.265+3720

         .         .         .         .         .         .  g.9878
taacctctctcataacaaacccatcctttctttttttttttttttgagacggagtcttga  c.265+3780

         .         .         .         .         .         .  g.9938
tgtgttgcccacactggagtgcagaggtgcgatcttagctcactgcaagctccatctccc  c.265+3840

         .         .         .         .         .         .  g.9998
gggttcacgccattctcctgcctcagccttctgagtagctgggactacaggcacccgcca  c.265+3900

         .         .         .         .         .         .  g.10058
ccatgcccagctaatttttttgtattttttttagtagagacagggttccaccatgttagc  c.265+3960

         .         .         .         .         .         .  g.10118
caggatggtgtcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgg  c.265+4020

         .         .         .         .         .         .  g.10178
gattacaggcttgagccaccgggcccggcacaaacccatcctttctaccttgtggtcact  c.265+4080

         .         .         .         .         .         .  g.10238
gctctagttgaggccttgttctatctctggcaatacacttctgattgtatcatttagaat  c.265+4140

         .         .         .         .         .         .  g.10298
gcttttaggccaggcgtggtggctcatgcttgtaatcctagcattttgggaggccaaggt  c.265+4200

         .         .         .         .         .         .  g.10358
gggaggcttgactgagcccaggaattcaagaccagcctgggcaacatggcaaaaacccat  c.265+4260

         .         .         .         .         .         .  g.10418
ctctatttctaaaaaattaaaaaataaaataaggccaggcacagtggctcacacctgtaa  c.265+4320

         .         .         .         .         .         .  g.10478
tcccagcattttgggagtccagggtggggtggatcacctgaggtcaggagttcgagacca  c.265+4380

         .         .         .         .         .         .  g.10538
gcctggccaacatggcaaaaccttgtctctactaaaaatacaaaatttggccacacatga  c.265+4440

         .         .         .         .         .         .  g.10598
tggcatgtacctgtaatcgcagctactccggaggctgaggcaggagatcacttgaaccca  c.265+4500

         .         .         .         .         .         .  g.10658
ggaggcggaggttgcagtgagctgagatcgtgccattgcactccagcctgggtaacagca  c.265+4560

         .         .         .         .         .         .  g.10718
agactctgtctcaaaaaaatatataaataaataaattaaattaaataatagaatgctttt  c.265+4620

         .         .         .         .         .         .  g.10778
agccacatgaaaagagaagaaaaggaaaggaagaagggaagaaggaagaaagaagattga  c.265+4680

         .         .         .         .         .         .  g.10838
tttattattctctgtaacaggaagcctggttaattcagttaattcggcagcccaaggaca  c.265+4740

         .     g.10851
ttagcaaggaccc  c.265+4753

--------------------- middle of intron ---------------------
                                    g.10852       .           g.10863
                                    c.266-4752  agtttctttcta  c.266-4741

.         .         .         .         .         .           g.10923
tctttctcctctgccatcttcaacattctggacttttgtcctcagacttatctcaaagtg  c.266-4681

.         .         .         .         .         .           g.10983
gctgctgcagtgtcaggaaaaagaaatcattcttgtcttgcatttctttttgtttttgtt  c.266-4621

.         .         .         .         .         .           g.11043
ttgttttatagagacagggtctcactctttcacccaggctggagtgcagtgacacaatca  c.266-4561

.         .         .         .         .         .           g.11103
cagctcactgcagcctggaactcctaggctcacacagtactcctgcctctttctctgtag  c.266-4501

.         .         .         .         .         .           g.11163
tatctgggactacaggcacatgccaccatgcacagctaatttttttgtttgtttgtttgt  c.266-4441

.         .         .         .         .         .           g.11223
ttgtttgtagagacgcagtcccactatgttgcccaggctgatcttttttccttttttctt  c.266-4381

.         .         .         .         .         .           g.11283
tttcttttccatcccccgagacagagtcttgctctctagcccaggctggagtgcagtgga  c.266-4321

.         .         .         .         .         .           g.11343
ttgacctcagctcactgcaacctccgcctcctgggttcaagcgattcttctgcctcagcc  c.266-4261

.         .         .         .         .         .           g.11403
tcctcagtagctgggattacaggtgcgcaccacgcctggctaatttttgtatttttagta  c.266-4201

.         .         .         .         .         .           g.11463
aagacagggtttcaccacgttggccaagctagtctcaacctcttgacttcgtgatccgcc  c.266-4141

.         .         .         .         .         .           g.11523
cacctcggcctcccaaagtgctgggattgcaggtatgagccatcgcgcctggccggcccc  c.266-4081

.         .         .         .         .         .           g.11583
caggctggtcttgaactcctggtctcaagcgatcctcctgccttggcctcctgaagtgct  c.266-4021

.         .         .         .         .         .           g.11643
ggggttacaggcatgagccaccatgcctgatcttgcatctcttttaaaaagtgaggaaaa  c.266-3961

.         .         .         .         .         .           g.11703
atgtattagtagcctcccagccaacttctcatttgctctctttggcaagaactatgtagc  c.266-3901

.         .         .         .         .         .           g.11763
atcctatgccgaaatccttcacttggcaaaggcaatggaattactgattggcttcttaaa  c.266-3841

.         .         .         .         .         .           g.11823
ctaatcaagtttcacctcctgatgctggggaggagcccagctgtccctaatcactgggcc  c.266-3781

.         .         .         .         .         .           g.11883
tttccgatgacggccacggaaatcagggtctgttagaaaggaggaaggtgctgacagcct  c.266-3721

.         .         .         .         .         .           g.11943
caccttcaaatctgcctccacagcaccaccctgtggccaatctccatctggccaagtcag  c.266-3661

.         .         .         .         .         .           g.12003
tccccttcttagtgcccttccaccgatttccaccagattctgtaaaatcaaatataaact  c.266-3601

.         .         .         .         .         .           g.12063
ccatagcacacactctaggccctccataattggacttgattgcttctccagcattgccgc  c.266-3541

.         .         .         .         .         .           g.12123
tggctcctccctggctcactcttagcagtaccgaaacacggagtctttgacagttccctg  c.266-3481

.         .         .         .         .         .           g.12183
cgcacacctggtccaggacacgtttcctgacttcttctcgtgggcacctcatcattcaca  c.266-3421

.         .         .         .         .         .           g.12243
actcacaatagtgtattcacaaaaatacattgttaggtgatgaaaacgtcagatcccctc  c.266-3361

.         .         .         .         .         .           g.12303
tgcccaaaatctaccatgactcccatttcacctagagaaagcttaagtccctacaatagt  c.266-3301

.         .         .         .         .         .           g.12363
atataggcctttacacgtgaaacttctggaccaaagattatggagcatatatattgcaat  c.266-3241

.         .         .         .         .         .           g.12423
gttgctttcccccgaagagtgtaccatattacactctcatggtgggttagagtgtactct  c.266-3181

.         .         .         .         .         .           g.12483
tgtaaaccagcaacgagtgccatcaattttaaaatttttgctaaattgttagatagtaac  c.266-3121

.         .         .         .         .         .           g.12543
ttattgatgtttgtatttgcatttacattattatttataaggtagagtctttttccatat  c.266-3061

.         .         .         .         .         .           g.12603
tggttaaccagttatattttcccgttggtaaagacataaaagtttggccgagcacagtga  c.266-3001

.         .         .         .         .         .           g.12663
ctcatgcctgtaatcccagcactttcagaggctgaggtgggaggatcacttgagcccagg  c.266-2941

.         .         .         .         .         .           g.12723
agttcgagaccagcctgggcaacatagggagaccctgtctctacaaaaaatacaaacatt  c.266-2881

.         .         .         .         .         .           g.12783
aactgggcatggtggcacacacctgtagttccagctacttgagaggattgcttgagccgg  c.266-2821

.         .         .         .         .         .           g.12843
gaggtcaaggctgcggtgagctgtgattgcaccactgcactccagcctgggtgacaaagc  c.266-2761

.         .         .         .         .         .           g.12903
gagaccctgtctcaaaaaaaagagacaagttgttttttcatgtatcaatcttgatattct  c.266-2701

.         .         .         .         .         .           g.12963
ccctcctctgtcctatttcctcccctgtcacctgcagtctttccttcagttccttctcat  c.266-2641

.         .         .         .         .         .           g.13023
ttttctgtcacttcatttctctaccagcaactattgaaaaataactccacatctgtacct  c.266-2581

.         .         .         .         .         .           g.13083
actgtgtgccatgcaatttcctaagtactttgcctgcatttattctaattctaccaaggt  c.266-2521

.         .         .         .         .         .           g.13143
agtcactgtttctgtttgacagatgaggagctggagacccagagagaataactaatgagc  c.266-2461

.         .         .         .         .         .           g.13203
ccaaggcacagactaagcattatcgactcttcctttctgcaccacaatgcatcccagttc  c.266-2401

.         .         .         .         .         .           g.13263
acctgtccatatctatctttgtcaactaaggtttatctttttctctgccccattttctcc  c.266-2341

.         .         .         .         .         .           g.13323
cctgaggagtctttattctctttgatgctccattttaaattatccgtgtttctttctctt  c.266-2281

.         .         .         .         .         .           g.13383
gctttcttatcagatctctctgggttccttcctcctcccatgcctccttcctctcagcaa  c.266-2221

.         .         .         .         .         .           g.13443
acccacttactatggagagcttatctctgtcctcttcttcccttccatgcggcagccttc  c.266-2161

.         .         .         .         .         .           g.13503
ggcctaatcttggtgaaataaacactgcagtacaggcctggcaaaagagtggggagtagg  c.266-2101

.         .         .         .         .         .           g.13563
ggagagtcggagaaggagaggctgggcacggtggctcacacctgtaatcccagcactttg  c.266-2041

.         .         .         .         .         .           g.13623
tgaggccgaggctggcagatcacctgaggtcagcagttcaagatcagcctggcgaacagg  c.266-1981

.         .         .         .         .         .           g.13683
gtgaaaccccatctctactactaataatataaaaattagccaggcgtagtggcaggcacc  c.266-1921

.         .         .         .         .         .           g.13743
tgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagag  c.266-1861

.         .         .         .         .         .           g.13803
gttgcagtgagccgagattgcaccattgcactccagcctgggcaataagagcgaaactca  c.266-1801

.         .         .         .         .         .           g.13863
gtctcaaaaaaaaaaaaaagggaaggaactggcagtgtggggagcaggacaggaagactg  c.266-1741

.         .         .         .         .         .           g.13923
ttttcatgaggtgaaggccaggaatgtgacttttggggcacgaggggacatgtgagcata  c.266-1681

.         .         .         .         .         .           g.13983
tgggtaagtatgtgttgggggctaccaaggatttggggcttttgtgagtgagaagattac  c.266-1621

.         .         .         .         .         .           g.14043
atgggtttgaaaaagagattggagggccaggtgcagtgactcacacctgtaatcccagca  c.266-1561

.         .         .         .         .         .           g.14103
ctttaggaggctggggtgggaggatcgcttgagcccaggaatttaagaccaacttggggc  c.266-1501

.         .         .         .         .         .           g.14163
cgggtgcggtggctcactcctgtaatcccagcactttgggaggccgtgaaaccccacctg  c.266-1441

.         .         .         .         .         .           g.14223
tactaaaaatgcaaaaaattagctggccatggtggcaggtgcttgtaatcccagctactc  c.266-1381

.         .         .         .         .         .           g.14283
ggaaggctgaggcacgagaatcgcttgaacctgggagacagacgttgcagtgagccacaa  c.266-1321

.         .         .         .         .         .           g.14343
aaaagaccagcttgggcaacatagtgatgagacctcgtctctacaaaaaatttaaaaatt  c.266-1261

.         .         .         .         .         .           g.14403
agccaggcctggtggcgggtgcctgtggtcccagccacttgggaggctgaggtgggagga  c.266-1201

.         .         .         .         .         .           g.14463
tcacctgagcccaggaagtcgaagctatagtgagctatgatcaggccactgcactccagc  c.266-1141

.         .         .         .         .         .           g.14523
ctgggcaatagagcaagactctgtctcaaaaaaaaaaaaaaaaggaaaagagattgggaa  c.266-1081

.         .         .         .         .         .           g.14583
acatgacgatctcagatggggcttgagtctcagagaagcagtacgtttgggtcccagcag  c.266-1021

.         .         .         .         .         .           g.14643
gcagcaaagactaacaggaggagacccccagacaggtggaaacagcgcagggtctgagat  c.266-961

.         .         .         .         .         .           g.14703
cagaccaaatccgcaaagcctccagaggtagatttggccctcactcttccccacatcata  c.266-901

.         .         .         .         .         .           g.14763
gttaggtgatagcccctcacaatgtccccacctcccccaggtcccagttacagagcagga  c.266-841

.         .         .         .         .         .           g.14823
gcctgtggccagcataacgcaggactggaggggcgctaagatccaggacactatggcagg  c.266-781

.         .         .         .         .         .           g.14883
cctggcgccgggaatccctgtggtctggacagtgagggcggtgaaaaggatctggacacc  c.266-721

.         .         .         .         .         .           g.14943
tccctccccttggcccactttgatttcacccctgccagggttcgtgagctgattccatgc  c.266-661

.         .         .         .         .         .           g.15003
actttctgcctgagtgggagcagcacactgaatgactgtcccatcctccctctcccccac  c.266-601

.         .         .         .         .         .           g.15063
accaacacagggcccattattatcacccattattatcagacactcctatccctgccctct  c.266-541

.         .         .         .         .         .           g.15123
ccttaggacactttgcagaaaggtgtgtggatataaatcactgcccagagcaacctgaac  c.266-481

.         .         .         .         .         .           g.15183
taagaaccagccctagccctacacctgttcttttaggaaaccctcctagcagcagcctcc  c.266-421

.         .         .         .         .         .           g.15243
ctattggcccctattggccctccttgtcctccccaccagaacagagagggactgagcgag  c.266-361

.         .         .         .         .         .           g.15303
ggttcccttaccaagatgcccctacaacccccacagcccacggccagctcatgctgattg  c.266-301

.         .         .         .         .         .           g.15363
tcatttttaagtttacacccaaaacccagccaacctggttcatgcttaagccctagacca  c.266-241

.         .         .         .         .         .           g.15423
cacaagaaatccgcagagccacacaaccgaggcttctccacttccctggcagagctccag  c.266-181

.         .         .         .         .         .           g.15483
gacccagaagcctggggagtcggcctgggccatgaccaggccctcagggataaggcaggg  c.266-121

.         .         .         .         .         .           g.15543
actcctctctgccgcacctctcccacttgtctggggaggcctcagagttagaagccccct  c.266-61

.         .         .         .         .         .           g.15603
tcccaagttctgacccgcctaggccctttcccccccagctttctctgtttgctctggcag  c.266-1


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