rotatin (RTTN) - coding DNA reference sequence

(used for variant description)

(last modified January 22, 2016)


This file was created to facilitate the description of sequence variants on transcript NM_173630.3 in the RTTN gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_033104.1, covering RTTN transcript NM_173630.3.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                                                    g.5008
                                                     attaattg       c.-61

 .         .         .         .         .         .                g.5068
 tggctggacgcagtggcgcggcagtttaattctccggcggctgcagattgacgggacgag       c.-1

          .         .         .  | 02      .         .         .    g.5440
 ATGGTCCTGGCAGGGCTCATCAGGAAACTCG | GTCATCAGCTGGCCGAGATCAGGGAGCGC    c.60
 M  V  L  A  G  L  I  R  K  L  G |   H  Q  L  A  E  I  R  E  R      p.20

          .         .         .         .         .         .       g.5500
 GCTCTCAAGAGTATTCTCTGCAAGATTGAGCACAACTTAATCTGCTACGCTGATCTCATT       c.120
 A  L  K  S  I  L  C  K  I  E  H  N  L  I  C  Y  A  D  L  I         p.40

          .         .         .         .         .         .       g.5560
 CAGGAGAGGCAACTTTTTCTTCATTTGCTGGAATGGTTCAATTTCCCGTCCGTTCCGATG       c.180
 Q  E  R  Q  L  F  L  H  L  L  E  W  F  N  F  P  S  V  P  M         p.60

          .         .         .          | 03        .         .    g.6484
 AAGGAAGAGGTTCTGAACCTGTTAAGCAGATTGGTTAAG | TATCCCCCAGCAGTCCAACAT    c.240
 K  E  E  V  L  N  L  L  S  R  L  V  K   | Y  P  P  A  V  Q  H      p.80

          .         .         .         .         .         .       g.6544
 TTGGTTGACGTTGGTGCAGTAGAGTTCTTATCTAAGCTTCGGTCTAATGTGGAGCCAAAT       c.300
 L  V  D  V  G  A  V  E  F  L  S  K  L  R  S  N  V  E  P  N         p.100

          .         .         .         .         .         .       g.6604
 CTGCAGGCTGAAATTGATGGCATTCTGGATGGACTTTTTCTTCTTCCTTCGGAAGTTCCT       c.360
 L  Q  A  E  I  D  G  I  L  D  G  L  F  L  L  P  S  E  V  P         p.120

          .         .         .        | 04.         .         .    g.8766
 GCACTATCTTCTGCCTCATACCAAACCAATCAAACTG | AATTGTCAAAAAACCCTGAAATC    c.420
 A  L  S  S  A  S  Y  Q  T  N  Q  T  E |   L  S  K  N  P  E  I      p.140

          .         .         .         .         .         .       g.8826
 TTAACAGGATATTTTCCCCAAGACAAAAGTAATTTCCAGCAGATGGAAGTGCCGCCACGA       c.480
 L  T  G  Y  F  P  Q  D  K  S  N  F  Q  Q  M  E  V  P  P  R         p.160

         | 05.         .         .         .         .         .    g.11275
 CCAGTGG | TAAATCAGACTGTGAAGTGCTTGAAGTTTTCTACATTTCCTTGGCTACCCCTG    c.540
 P  V  V |   N  Q  T  V  K  C  L  K  F  S  T  F  P  W  L  P  L      p.180

          .         .         .         | 06         .         .    g.13010
 ACCACCACAGACAGACATGTCCTCTCCTCTAATGAAAG | CTCTTTAAGAAGTAGTAACCAC    c.600
 T  T  T  D  R  H  V  L  S  S  N  E  S  |  S  L  R  S  S  N  H      p.200

          .         .         .         .         .         .       g.13070
 ACTTTAATCTGGAACACCTGTGAACTATTGAAGGATGTTATCATGCAAGATTTTCCTGCT       c.660
 T  L  I  W  N  T  C  E  L  L  K  D  V  I  M  Q  D  F  P  A         p.220

          .         .         .    | 07    .         .         .    g.14105
 GAGATTTTCCTTCAAAGGCCAAAAATTGTTCAG | AGCCTTTTATCTCTGTTGAAACTGGCC    c.720
 E  I  F  L  Q  R  P  K  I  V  Q   | S  L  L  S  L  L  K  L  A      p.240

          .         .         .         .         .         .       g.14165
 TTTGGAGATGGAAAGCATCGCCTGGCATTACAGTCGGTGTCCTGCCTGCAGCAGCTGTGC       c.780
 F  G  D  G  K  H  R  L  A  L  Q  S  V  S  C  L  Q  Q  L  C         p.260

          .         .         .         .         .         .       g.14225
 ATGTATTTAAGAAACAGACTTAACTTTCACCGAGATCCAGGTTTTTTCTCCAATAAACAC       c.840
 M  Y  L  R  N  R  L  N  F  H  R  D  P  G  F  F  S  N  K  H         p.280

   | 08      .         .         .         .         .         .    g.17332
 G | ACACAGTTTCCCAAAATTCTTCTTTGTCTTATTGTCATGAAGCAAGAGGTACTCATCAT    c.900
 D |   T  V  S  Q  N  S  S  L  S  Y  C  H  E  A  R  G  T  H  H      p.300

          .         .         .         .         .         .       g.17392
 TCCCAGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGC       c.960
 S  Q  N  P  S  P  G  S  S  S  P  R  P  S  V  V  G  R  T  G         p.320

          .         .         .         .        | 09.         .    g.20020
 CAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGCGTCCTCTAG | TGGAAGTAGTAGT    c.1020
 Q  R  P  R  G  D  G  Q  D  W  D  A  A  S  S  S  |  G  S  S  S      p.340

          .         .         .         .         .         .       g.20080
 CATGCTCATGTAAACTCCAGGATATCCGTTCATTCACCTTTGGATATGGGACACATAGAT       c.1080
 H  A  H  V  N  S  R  I  S  V  H  S  P  L  D  M  G  H  I  D         p.360

          .         .         .         .         .         .       g.20140
 CTGCCAGAGCTGGAAACTGAAGACACATTGGAACTACAATTCCAGCAGCTCAGTCTTCCC       c.1140
 L  P  E  L  E  T  E  D  T  L  E  L  Q  F  Q  Q  L  S  L  P         p.380

          .         .         .         .          | 10        .    g.22514
 CAGTTTTGTGTCTCCATTCTGGAATCAGCTGTTCCTCTCTTAAGAACAG | GTAGCAGACAA    c.1200
 Q  F  C  V  S  I  L  E  S  A  V  P  L  L  R  T  G |   S  R  Q      p.400

          .         .         .         .         .         .       g.22574
 GTGATAATAAGAGTTCTGGAATTGCTTACAGAGGATATGACACTTATTGGTGAAGCAATT       c.1260
 V  I  I  R  V  L  E  L  L  T  E  D  M  T  L  I  G  E  A  I         p.420

          .         .         .         .      | 11  .         .    g.33896
 TCAACAGATATCTGGGATGACAGCAGCCTTTTTGGTATAGATATG | AAGGAGAAACTACTC    c.1320
 S  T  D  I  W  D  D  S  S  L  F  G  I  D  M   | K  E  K  L  L      p.440

          .         .         .         .         .         .       g.33956
 CTGGTGTTGGGAGCCCTTGGAGAAACCATGTGCTACCATAAAAGTAGTATCAGTTTGGAG       c.1380
 L  V  L  G  A  L  G  E  T  M  C  Y  H  K  S  S  I  S  L  E         p.460

          .         .         .         .         .         .       g.34016
 CAGCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTTTATCAGCATTTCCCTGTTTGCA       c.1440
 Q  P  E  V  M  L  V  H  H  R  M  A  F  I  S  I  S  L  F  A         p.480

          .         .         .       | 12 .         .         .    g.41683
 GTTCGACTGCTACAAACGCTTCTCCCTGTTGAAAAG | GCAAGCGAGTTTTTATCAGAGCCT    c.1500
 V  R  L  L  Q  T  L  L  P  V  E  K   | A  S  E  F  L  S  E  P      p.500

          .         .         .         .         .         .       g.41743
 ATGTCAACAGCATTATTTCTCCTTTCTTTGGACATGCCTATTTCTTTGGAATATCCAAAT       c.1560
 M  S  T  A  L  F  L  L  S  L  D  M  P  I  S  L  E  Y  P  N         p.520

          .         .         .         .         .         .       g.41803
 ATTCATGAAGCTGTTGTGGCCTATTTGGAACAGCTGAATTCTGAAAACTACAGTATTTAT       c.1620
 I  H  E  A  V  V  A  Y  L  E  Q  L  N  S  E  N  Y  S  I  Y         p.540

          .         .         .         .         .         .       g.41863
 AAACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATT       c.1680
 K  R  T  A  E  A  V  Y  S  I  E  C  T  C  N  F  L  S  D  I         p.560

           | 13        .         .         .         .         .    g.43746
 GGGAAAGAG | GGAGAGAAGAATCTCTTAGAATTAGTGGAGCTGGCAGACCAAGCCTTGCGT    c.1740
 G  K  E   | G  E  K  N  L  L  E  L  V  E  L  A  D  Q  A  L  R      p.580

          .         .         .         .         .         .       g.43806
 AGCTTTTCCTATCATCAGCATTTCCCGCTAATAAAGGAAATCATCAGCATTTGTTCAAAG       c.1800
 S  F  S  Y  H  Q  H  F  P  L  I  K  E  I  I  S  I  C  S  K         p.600

    | 14     .         .         .         .         .         .    g.44596
 AT | CTGGAAATCTGCTCAGGCCAGTCCATTACTACAAGGAGAAAGTCAGAAGGTGCTTCTC    c.1860
 I  |  W  K  S  A  Q  A  S  P  L  L  Q  G  E  S  Q  K  V  L  L      p.620

          .         .         .         .         .         .       g.44656
 CATATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAAACTTACCACTGCTGTCTGGAA       c.1920
 H  M  L  S  H  P  L  P  R  V  K  A  E  T  Y  H  C  C  L  E         p.640

           | 15        .         .         .         .         .    g.60044
 ATCACGAAG | GAATGTTTAGGTGTCCATAATGTCACTAAACCCGTGTCTTCACTTTGCAAT    c.1980
 I  T  K   | E  C  L  G  V  H  N  V  T  K  P  V  S  S  L  C  N      p.660

          .         .         .         .         .         .       g.60104
 GGAATTCATTTTCTACTTCATCCAAAAGTTCTGTATGAAATCTCTGTATTTGGCATTCAA       c.2040
 G  I  H  F  L  L  H  P  K  V  L  Y  E  I  S  V  F  G  I  Q         p.680

          .      | 16  .         .         .         .         .    g.60684
 GAGCCCGAAAGTGAG | GTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGA    c.2100
 E  P  E  S  E   | V  N  T  A  A  K  A  I  L  L  Y  L  L  Q  G      p.700

          .         .         .         .         .         .       g.60744
 CGATTGATGATGACAGCATTGACCTGGAACAAGTTTATTGAATCTCTCTGTCCTGTCATC       c.2160
 R  L  M  M  T  A  L  T  W  N  K  F  I  E  S  L  C  P  V  I         p.720

          .   | 17     .         .         .         .         .    g.61737
 CCAATACTACAG | GGCTATGCCGACACAGAAGATCCTCTGGGTAACTGCATTCTCCTTCTA    c.2220
 P  I  L  Q   | G  Y  A  D  T  E  D  P  L  G  N  C  I  L  L  L      p.740

          .         .         .         .         .         .       g.61797
 AGCAAAGCAAGTTCTGACACAGAAGAGATGCTTCCGTGTACTACCCGATTAAAGTCCATG       c.2280
 S  K  A  S  S  D  T  E  E  M  L  P  C  T  T  R  L  K  S  M         p.760

          .         .          | 18        .         .         .    g.64974
 CTGCGACTTTTGCTAGTGAAAAAGCCATC | GGTCCGTTCGCTAGCATTAAAGCTTTTAGCA    c.2340
 L  R  L  L  L  V  K  K  P  S  |  V  R  S  L  A  L  K  L  L  A      p.780

          .         .         .         .         .         .       g.65034
 TTCCATCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGTT       c.2400
 F  H  L  T  S  E  E  G  A  D  T  K  R  P  L  I  D  A  R  V         p.800

          .         .         .         .         .         .       g.65094
 CTCTCCAGAGTTACTGATTTATTCATTGGGAAGAAACCTATTGAACTCAGACTGGATGAC       c.2460
 L  S  R  V  T  D  L  F  I  G  K  K  P  I  E  L  R  L  D  D         p.820

          .         .  | 19      .         .         .         .    g.68378
 AGAAGAGAGCTGGTTATTAAG | TTGGAGACTGTTGAAAAGGTATATGAAATCTTCACCTCA    c.2520
 R  R  E  L  V  I  K   | L  E  T  V  E  K  V  Y  E  I  F  T  S      p.840

          .         .         .         .         .         .       g.68438
 GATGATGTTGATCTCGTTTTGAGAAAGTCAGCTGCTGAACAGTTAGCTGTGATTATGCAA       c.2580
 D  D  V  D  L  V  L  R  K  S  A  A  E  Q  L  A  V  I  M  Q         p.860

   | 20      .         .         .         .         .         .    g.70597
 G | ATATTAAAATGCATGCTGTGGTGAAAAAGTTATGCTTAATTGACAAAATAATTGAGTAT    c.2640
 D |   I  K  M  H  A  V  V  K  K  L  C  L  I  D  K  I  I  E  Y      p.880

          .         .         . | 21       .         .         .    g.71040
 TTAAATGAATGTGTGAGTCAAGATGGCAAG | GTTGTAGAATGTTTGGTACAACCATGCCTC    c.2700
 L  N  E  C  V  S  Q  D  G  K   | V  V  E  C  L  V  Q  P  C  L      p.900

          .         .         .         .         .         .       g.71100
 ACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCAACAG       c.2760
 T  L  L  R  K  V  L  C  G  D  P  V  M  R  V  S  L  S  Q  Q         p.920

          .         .         | 22         .         .         .    g.75478
 TCTTCTCTTTTGACCGTGTTATTCAGAG | TTTCCTTAATATTTCATGAAGATTGTAGTGTC    c.2820
 S  S  L  L  T  V  L  F  R  V |   S  L  I  F  H  E  D  C  S  V      p.940

          .         .         .         .         .         .       g.75538
 GTGACTGAAGTTGGAGCACTATTTTGTCTTCTATTATTTGATGAAGTATCGAGAATGGAT       c.2880
 V  T  E  V  G  A  L  F  C  L  L  L  F  D  E  V  S  R  M  D         p.960

       | 23  .         .         .         .         .         .    g.76240
 ATGTG | GTCTGTTAATCCTTCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTGCCTGTT    c.2940
 M  W  |  S  V  N  P  S  N  K  P  S  L  P  S  V  F  S  L  P  V      p.980

          .     | 24   .         .         .         .         .    g.82226
 TCCGTTTTTAGAAG | GTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCT    c.3000
 S  V  F  R  R  |  Y  H  L  P  V  H  V  I  G  H  H  A  V  S  P      p.1000

          .         .         .         .         .         .       g.82286
 TACTCCATAGTTTTGCCCTTATCTGCTGATTGTTTGGCCTTGAAGCCGGTGTCAGATATG       c.3060
 Y  S  I  V  L  P  L  S  A  D  C  L  A  L  K  P  V  S  D  M         p.1020

          .         .         .         .         .         .       g.82346
 CTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATAATCTGTTGAAGCAAATG       c.3120
 L  R  I  A  W  N  L  S  W  Y  H  G  S  D  N  L  L  K  Q  M         p.1040

          .         .    | 25    .         .         .         .    g.83022
 AACTCTGAAACTAAAACGCAAGA | AATTTTAGATGCATTGAAGTTATCTACAGAGGACATC    c.3180
 N  S  E  T  K  T  Q  E  |  I  L  D  A  L  K  L  S  T  E  D  I      p.1060

          .         .         .         .         .         .       g.83082
 CTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTCCATTGTT       c.3240
 L  T  L  K  I  T  H  M  A  S  G  L  Q  D  C  L  H  S  I  V         p.1080

          .         .         .         .         .         .       g.83142
 CAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATGAGTTTTTATCTTCTG       c.3300
 Q  A  A  T  H  R  E  V  R  A  A  V  T  R  M  S  F  Y  L  L         p.1100

          .         .         .         .         .         .       g.83202
 AATGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTTG       c.3360
 N  D  R  L  S  L  K  G  C  P  G  P  C  G  V  T  L  K  S  L         p.1120

          .         .    | 26    .         .         .         .    g.89063
 GCTTGGCACACCGCACTAAACAG | GTTTTTACAGGTGCTTCCTGCTTGCACTGAAGATGAG    c.3420
 A  W  H  T  A  L  N  R  |  F  L  Q  V  L  P  A  C  T  E  D  E      p.1140

          .         .         .         .         .         .       g.89123
 AAACTGCTAATAGATATCATACATTTTTTAAATAAATTAATAAAGGAACAAAGAAAAAAT       c.3480
 K  L  L  I  D  I  I  H  F  L  N  K  L  I  K  E  Q  R  K  N         p.1160

          .         .         .         .         | 27         .    g.96139
 TCTTCACTAGAACTTCTAAACTGGATTCTCGAATTACTTCTTAGACAT | AGTGCAAACCCA    c.3540
 S  S  L  E  L  L  N  W  I  L  E  L  L  L  R  H   | S  A  N  P      p.1180

          .         .         .         .         .         .       g.96199
 CTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGATGATATCCGG       c.3600
 L  L  D  L  L  V  L  T  E  S  Q  A  R  E  E  T  D  D  I  R         p.1200

          .         .         .         .         .         .       g.96259
 ACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCTCTTTTTGATACCTTGCTGCTC       c.3660
 T  A  V  R  Q  Q  L  Q  K  E  L  I  A  L  F  D  T  L  L  L         p.1220

          .         .    | 28    .         .         .         .    g.101046
 AATTTCATGGAAGTTACTGACAG | GAAATGCTCGGAACTTCTTTACGTTTTTCAAACGCAG    c.3720
 N  F  M  E  V  T  D  R  |  K  C  S  E  L  L  Y  V  F  Q  T  Q      p.1240

          .         .         .         .         .         .       g.101106
 CTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTG       c.3780
 L  A  L  K  L  L  Q  C  L  K  V  T  D  A  P  H  F  Y  G  L         p.1260

          .         .         .         .         .         .       g.101166
 CCGTCCCTTGAGCGGACCTTACGAGGGATGGCTAACCTCACTGCGTTTCCGGGATGGAGC       c.3840
 P  S  L  E  R  T  L  R  G  M  A  N  L  T  A  F  P  G  W  S         p.1280

          .         .         .         .         .         .       g.101226
 TCACACTCTCCTCTCACAAAGCCTCTAGATATCTGTGTGAAGTACTTGTCAGGTCTCCTT       c.3900
 S  H  S  P  L  T  K  P  L  D  I  C  V  K  Y  L  S  G  L  L         p.1300

     | 29    .         .         .         .         .         .    g.117979
 GAG | GTCATTACTTCTTTTTATGTGGAGCGTGGAGGAAATGCTATGTCCTTCATGGGAAAA    c.3960
 E   | V  I  T  S  F  Y  V  E  R  G  G  N  A  M  S  F  M  G  K      p.1320

          .         .         .         .         .         .       g.118039
 GGTGTTACAAAGAGCACAATTCTTTGCTTGCTTCACTTATCCCATGAGATGATGGCCCAG       c.4020
 G  V  T  K  S  T  I  L  C  L  L  H  L  S  H  E  M  M  A  Q         p.1340

          .   | 30     .         .         .         .         .    g.118554
 GCTGGGAGCTTG | GAGTGGATGTCACTTTGGTTCTTGCCTTTGGGTAGTCATAGTGAAGAA    c.4080
 A  G  S  L   | E  W  M  S  L  W  F  L  P  L  G  S  H  S  E  E      p.1360

          .         .         .         .         .         .       g.118614
 CATATTCCTACTCAACAAGGATTGGCTTGGTTGATTCCATTATGGGTTGATCGGGACCCA       c.4140
 H  I  P  T  Q  Q  G  L  A  W  L  I  P  L  W  V  D  R  D  P         p.1380

     | 31    .         .         .         .         .         .    g.122636
 GAG | GTGAGATTCACTTCACTGGGATTAGGATCAGCACTGACCACCCTTGAAACGGGCTGT    c.4200
 E   | V  R  F  T  S  L  G  L  G  S  A  L  T  T  L  E  T  G  C      p.1400

          .         .         .         .         .         .       g.122696
 GTGGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAAC       c.4260
 V  A  L  A  N  S  C  Q  N  I  S  G  G  L  W  G  T  V  V  N         p.1420

          .         .         .         .   | 32     .         .    g.124060
 ATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCGGGAG | GCGGCATTTATTCTTCAG    c.4320
 I  L  L  D  Q  S  E  C  S  M  V  R  R  E   | A  A  F  I  L  Q      p.1440

          .         .         .         .         .     | 33   .    g.135191
 AATCTCCTTGTAATTCCAATGCCTACAGAAATTATAAAGGATTATACTTGGCAG | GGTCCC    c.4380
 N  L  L  V  I  P  M  P  T  E  I  I  K  D  Y  T  W  Q   | G  P      p.1460

          .         .         .         .         .         .       g.135251
 TGTGTTCATGATGAGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCCTTCAGGCTCTT       c.4440
 C  V  H  D  E  D  S  G  L  S  L  I  G  K  P  A  L  Q  A  L         p.1480

          .         .         .         .         .         .       g.135311
 TTATATCACTGCCATTTTTATGAACATTTGAATCAGATGGTAAAGCATTGTTACCTAGGA       c.4500
 L  Y  H  C  H  F  Y  E  H  L  N  Q  M  V  K  H  C  Y  L  G         p.1500

          .         .         .         .         .         .       g.135371
 CGGTGTATGTTTGATTTGAATTTTTCTGCTTTTGATAGAAATTCAGAAAGCAATGATTTA       c.4560
 R  C  M  F  D  L  N  F  S  A  F  D  R  N  S  E  S  N  D  L         p.1520

      | 34   .         .         .         .         .         .    g.136788
 AATG | GTTTAGATGACTCATTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAGGATCGA    c.4620
 N  G |   L  D  D  S  F  K  F  W  R  A  P  S  R  T  S  Q  D  R      p.1540

          .         .         .    | 35    .         .         .    g.144831
 GATCCAAGTTCTCTCTCCACCTCAGAAACAACG | GTGGCACCTTCATTGGGGAGTACTGAA    c.4680
 D  P  S  S  L  S  T  S  E  T  T   | V  A  P  S  L  G  S  T  E      p.1560

          .         .         .         .         .         .       g.144891
 TTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGCCTCCCATGACCAGTTTGTG       c.4740
 F  Q  P  L  V  Q  S  T  T  L  L  P  E  A  S  H  D  Q  F  V         p.1580

         | 36.         .         .         .         .         .    g.150737
 GCTCAAG | GTCACCAGGAAAGTACATCACCACGGCCACCTCATGATTCATCTCTTTCTGCT    c.4800
 A  Q  G |   H  Q  E  S  T  S  P  R  P  P  H  D  S  S  L  S  A      p.1600

          .         .         .         .         .         .       g.150797
 CCCCTGCCCAAACTGTGTGTTTTTGTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC       c.4860
 P  L  P  K  L  C  V  F  V  T  P  S  L  L  S  A  M  C  S  L         p.1620

          .         .         .         .         .         .       g.150857
 TTGGACAACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAAGCTCAT       c.4920
 L  D  N  L  L  T  I  A  P  R  D  T  A  K  A  F  R  Q  A  H         p.1640

          .         . | 37       .         .         .         .    g.152934
 CTCATAGAACTTCTCTGTAG | CATTGCAGATGCTACCCTCATACAGACATGTGTCCAGGAA    c.4980
 L  I  E  L  L  C  S  |  I  A  D  A  T  L  I  Q  T  C  V  Q  E      p.1660

          .         .         .         .         .  | 38      .    g.156451
 CTCAGAGCCCTGCTGCCTTCATCACCTCCAGCTGAACACACTCAGGCTCAG | GTTTCCTTT    c.5040
 L  R  A  L  L  P  S  S  P  P  A  E  H  T  Q  A  Q   | V  S  F      p.1680

          .         .         .         .         .         .       g.156511
 CTCCTGGAATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCT       c.5100
 L  L  E  Y  L  S  S  L  S  R  L  L  Q  S  C  L  L  V  E  P         p.1700

          .         .         .         .         .         .       g.156571
 GACCTTGTGATTCAGGATGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTC       c.5160
 D  L  V  I  Q  D  E  L  V  K  P  L  I  T  N  I  I  G  I  L         p.1720

          .         .      | 39  .         .         .         .    g.159213
 ACCATATGTACCAAAGATGTATTAG | ATAAAGAGTTAATATCAGCTTTTTATCACACATGG    c.5220
 T  I  C  T  K  D  V  L  D |   K  E  L  I  S  A  F  Y  H  T  W      p.1740

          .         .         .         .         .         .       g.159273
 ACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCG       c.5280
 T  H  L  F  N  L  L  A  M  L  L  R  K  A  G  A  I  T  L  P         p.1760

          .         .         .         .    | 40    .         .    g.162555
 TTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTG | ATATGTTCTGCACATGT    c.5340
 F  V  T  V  A  L  A  K  H  W  T  A  A  I  D |   M  F  C  T  C      p.1780

          .         .         .         .         .         .       g.162615
 GCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTT       c.5400
 A  G  L  S  A  T  C  P  A  L  Y  T  A  S  L  Q  F  L  S  V         p.1800

          .         .         .         .         .         .       g.162675
 CTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAACACATTTATGCTGT       c.5460
 L  L  T  E  E  A  K  G  H  L  Q  A  K  S  K  T  H  L  C  C         p.1820

          .         .         .         .         .         .       g.162735
 AGTCCAACAGTGGCTTCACTTCTTGATGACTCTCAGGAAAATCAGAAATCTCTAGAACAA       c.5520
 S  P  T  V  A  S  L  L  D  D  S  Q  E  N  Q  K  S  L  E  Q         p.1840

          .         .  | 41      .         .         .         .    g.179784
 CTTAGTGATGTAATCCTTCAG | TGCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAAGA    c.5580
 L  S  D  V  I  L  Q   | C  Y  E  G  K  S  S  K  D  I  L  K  R      p.1860

          .         .         .         .         .         .       g.179844
 GTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGAAACATGCT       c.5640
 V  A  A  N  A  L  M  S  L  L  A  V  S  R  R  A  Q  K  H  A         p.1880

         | 42.         .         .         .         .         .    g.180670
 TTGAAAG | CCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTG    c.5700
 L  K  A |   N  L  I  D  N  C  M  E  Q  M  K  H  I  N  A  Q  L      p.1900

          .         .         .         .      | 43  .         .    g.181940
 AACCTAGATTCTCTGAGGCCTGGGAAAGCAGCATTGAAAAAAAAG | GAGGATGGTGTTATT    c.5760
 N  L  D  S  L  R  P  G  K  A  A  L  K  K  K   | E  D  G  V  I      p.1920

          .         .         .         .         .         .       g.182000
 AAAGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTGTCTTTATCAAAATGAGGAATGT       c.5820
 K  E  L  S  I  A  M  Q  L  L  R  N  C  L  Y  Q  N  E  E  C         p.1940

     | 44    .         .         .         .         .         .    g.185935
 AAA | GAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATT    c.5880
 K   | E  A  A  L  E  A  H  L  V  P  V  L  H  S  L  W  P  W  I      p.1960

          .         .         .         .         .         .       g.185995
 TTGATGGATGATTCATTGATGCAAATTTCTCTGCAGCTCCTTTGTGTCTATACTGCAAAT       c.5940
 L  M  D  D  S  L  M  Q  I  S  L  Q  L  L  C  V  Y  T  A  N         p.1980

          . | 45       .         .         .         .         .    g.189959
 TTTCCAAATG | GTTGCAGTTCTCTTTGTTGGTCAAGTTGTGGACAACACCCTGTTCAAGCT    c.6000
 F  P  N  G |   C  S  S  L  C  W  S  S  C  G  Q  H  P  V  Q  A      p.2000

          .         .         .         .         .         .       g.190019
 ACACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAG       c.6060
 T  H  R  G  A  V  S  N  S  L  M  L  C  I  L  K  L  A  S  Q         p.2020

          .         .         .         .         .         .       g.190079
 ATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTTCTTTCAAACCTGGCC       c.6120
 M  P  L  E  N  T  T  V  Q  Q  M  V  F  M  L  L  S  N  L  A         p.2040

          .         .         .    | 46    .         .         .    g.193079
 TTGTCGCATGACTGTAAAGGAGTAATTCAGAAG | AGTAACTTCTTACAGAACTTCCTCTCT    c.6180
 L  S  H  D  C  K  G  V  I  Q  K   | S  N  F  L  Q  N  F  L  S      p.2060

          .         .         .         .         .         .       g.193139
 CTAGCATTGCCAAAAGGAGGAAATAAACATCTAAGTAATCTGACTATTCTTTGGTTGAAG       c.6240
 L  A  L  P  K  G  G  N  K  H  L  S  N  L  T  I  L  W  L  K         p.2080

          .         .         .         .         .         .       g.193199
 TTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGGC       c.6300
 L  L  L  N  I  S  S  G  E  D  G  Q  Q  M  I  L  R  L  D  G         p.2100

          .         .         .         .         .         .       g.193259
 TGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCCT       c.6360
 C  L  D  L  L  T  E  M  S  K  Y  K  H  K  S  S  P  L  L  P         p.2120

          .         .         .         .         .         .       g.193319
 CTTCTTATCTTTCATAATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATCCTGGCTAAT       c.6420
 L  L  I  F  H  N  V  C  F  S  P  A  N  K  P  K  I  L  A  N         p.2140

   | 47      .         .         .         .         .         .    g.204301
 G | AAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGTGAGAATCAAAATGCTCAGAGG    c.6480
 E |   K  V  I  T  V  L  A  A  C  L  E  S  E  N  Q  N  A  Q  R      p.2160

          .         .         .         .      | 48  .         .    g.205474
 ATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAG | GCAAAAACAGCTTTG    c.6540
 I  G  A  A  A  L  W  A  L  I  Y  N  Y  Q  K   | A  K  T  A  L      p.2180

          .         .         .         .         .      | 49  .    g.206495
 AAAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA | CTTTC    c.6600
 K  S  P  S  V  K  R  R  V  D  E  A  Y  S  L  A  K  K  T |   F      p.2200

          .         .         .         .         .         .       g.206555
 CCAAACTCAGAAGCAAACCCTCTAAATGCCTATTATTTGAAATGTCTTGAAAACCTCGTG       c.6660
 P  N  S  E  A  N  P  L  N  A  Y  Y  L  K  C  L  E  N  L  V         p.2220

          .         .                                               g.206576
 CAGCTCCTTAATTCTTCCTGA                                              c.6681
 Q  L  L  N  S  S  X                                                p.2226

          .         .         .         .         .         .       g.206636
 gtgccatgggatgctacaccttgaagctgacagtcatcaacaggggagctaaagttgaag       c.*60

          .         .         .         .         .         .       g.206696
 ccagctgtgtgtagcagctgttacctgaagacgtgctacctctctacaaagtgttgatcc       c.*120

          .         .         .         .         .         .       g.206756
 ccttctttcccatgagagagagaactggtgatactccaacaccgtccagttgtggcagct       c.*180

          .         .         .         .         .         .       g.206816
 ctccagaagtaatagcagctgacaactttctgtgccttttcctttctgttgaaaaggcat       c.*240

          .         .         .         .         .         .       g.206876
 agaaagttctgggaacataaacatttttacccttttctatgccatttattttgtaaaaat       c.*300

          .         .         .         .                           g.206923
 cctatttaacagttatttaataaaacaatatttttagaaactaaaaa                    c.*347

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Rotatin protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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