(used for variant description)
(last modified December 10, 2013)
This file was created to facilitate the description of sequence variants on transcript NM_001165963.1 in the SCN1A gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000002.11, covering SCN1A transcript NM_001165963.1.
(upstream sequence)
. g.80511
aatgtgcaggatgacaag c.-1
. . . . . . g.80571
ATGGAGCAAACAGTGCTTGTACCACCAGGACCTGACAGCTTCAACTTCTTCACCAGAGAA c.60
M E Q T V L V P P G P D S F N F F T R E p.20
. . . . . . g.80631
TCTCTTGCGGCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAGAATCCCAAACCAGAC c.120
S L A A I E R R I A E E K A K N P K P D p.40
. . . . . . g.80691
AAAAAAGATGACGACGAAAATGGCCCAAAGCCAAATAGTGACTTGGAAGCTGGAAAGAAC c.180
K K D D D E N G P K P N S D L E A G K N p.60
. . . . . . g.80751
CTTCCATTTATTTATGGAGACATTCCTCCAGAGATGGTGTCAGAGCCCCTGGAGGACCTG c.240
L P F I Y G D I P P E M V S E P L E D L p.80
. . | 02 . . . . g.95480
GACCCCTACTATATCAATAAGAAA | ACTTTTATAGTATTGAATAAAGGGAAGGCCATCTTC c.300
D P Y Y I N K K | T F I V L N K G K A I F p.100
. . . . . . g.95540
CGGTTCAGTGCCACCTCTGCCCTGTACATTTTAACTCCCTTCAATCCTCTTAGGAAAATA c.360
R F S A T S A L Y I L T P F N P L R K I p.120
. . | 03 . . . . g.97669
GCTATTAAGATTTTGGTACATTC | ATTATTCAGCATGCTAATTATGTGCACTATTTTGACA c.420
A I K I L V H S | L F S M L I M C T I L T p.140
. . . . . | 04 . g.99373
AACTGTGTGTTTATGACAATGAGTAACCCTCCTGATTGGACAAAGAATGTAGA | ATACACC c.480
N C V F M T M S N P P D W T K N V E | Y T p.160
. . . . . . g.99433
TTCACAGGAATATATACTTTTGAATCACTTATAAAAATTATTGCAAGGGGATTCTGTTTA c.540
F T G I Y T F E S L I K I I A R G F C L p.180
. . . . . . g.99493
GAAGATTTTACTTTCCTTCGGGATCCATGGAACTGGCTCGATTTCACTGTCATTACATTT c.600
E D F T F L R D P W N W L D F T V I T F p.200
| 05 . . . . . . g.101247
GC | GTACGTCACAGAGTTTGTGGACCTGGGCAATGTCTCGGCATTGAGAACATTCAGAGTT c.660
A | Y V T E F V D L G N V S A L R T F R V p.220
. . . | 06 . . . g.102170
CTCCGAGCATTGAAGACGATTTCAGTCATTCCAG | GCCTGAAAACCATTGTGGGAGCCCTG c.720
L R A L K T I S V I P G | L K T I V G A L p.240
. . . . . . g.102230
ATCCAGTCTGTGAAGAAGCTCTCAGATGTAATGATCCTGACTGTGTTCTGTCTGAGCGTA c.780
I Q S V K K L S D V M I L T V F C L S V p.260
. . . . . . g.102290
TTTGCTCTAATTGGGCTGCAGCTGTTCATGGGCAACCTGAGGAATAAATGTATACAATGG c.840
F A L I G L Q L F M G N L R N K C I Q W p.280
. . . . . . g.102350
CCTCCCACCAATGCTTCCTTGGAGGAACATAGTATAGAAAAGAATATAACTGTGAATTAT c.900
P P T N A S L E E H S I E K N I T V N Y p.300
. . . . . . g.102410
AATGGTACACTTATAAATGAAACTGTCTTTGAGTTTGACTGGAAGTCATATATTCAAGAT c.960
N G T L I N E T V F E F D W K S Y I Q D p.320
| 07 . . . . . . g.105239
TCAA | GATATCATTATTTCCTGGAGGGTTTTTTAGATGCACTACTATGTGGAAATAGCTCT c.1020
S R | Y H Y F L E G F L D A L L C G N S S p.340
| 08 . . . . . g.106416
GATGCAGG | CCAATGTCCAGAGGGATATATGTGTGTGAAAGCTGGTAGAAATCCCAATTAT c.1080
D A G | Q C P E G Y M C V K A G R N P N Y p.360
. . . . . . g.106476
GGCTACACAAGCTTTGATACCTTCAGTTGGGCTTTTTTGTCCTTGTTTCGACTAATGACT c.1140
G Y T S F D T F S W A F L S L F R L M T p.380
. . . | 09 . . . g.107186
CAGGACTTCTGGGAAAATCTTTATCAACTG | ACATTACGTGCTGCTGGGAAAACGTACATG c.1200
Q D F W E N L Y Q L | T L R A A G K T Y M p.400
. . . . . . g.107246
ATATTTTTTGTATTGGTCATTTTCTTGGGCTCATTCTACCTAATAAATTTGATCCTGGCT c.1260
I F F V L V I F L G S F Y L I N L I L A p.420
. . . . . . g.107306
GTGGTGGCCATGGCCTACGAGGAACAGAATCAGGCCACCTTGGAAGAAGCAGAACAGAAA c.1320
V V A M A Y E E Q N Q A T L E E A E Q K p.440
. . . . . | 10. g.108808
GAGGCCGAATTTCAGCAGATGATTGAACAGCTTAAAAAGCAACAGGAGGCAGCTCAG | CAG c.1380
E A E F Q Q M I E Q L K K Q Q E A A Q | Q p.460
. . . . . . g.108868
GCAGCAACGGCAACTGCCTCAGAACATTCCAGAGAGCCCAGTGCAGCAGGCAGGCTCTCA c.1440
A A T A T A S E H S R E P S A A G R L S p.480
. . . . . . g.108928
GACAGCTCATCTGAAGCCTCTAAGTTGAGTTCCAAGAGTGCTAAGGAAAGAAGAAATCGG c.1500
D S S S E A S K L S S K S A K E R R N R p.500
. . . . . . g.108988
AGGAAGAAAAGAAAACAGAAAGAGCAGTCTGGTGGGGAAGAGAAAGATGAGGATGAATTC c.1560
R K K R K Q K E Q S G G E E K D E D E F p.520
. . . . . . g.109048
CAAAAATCTGAATCTGAGGACAGCATCAGGAGGAAAGGTTTTCGCTTCTCCATTGAAGGG c.1620
Q K S E S E D S I R R K G F R F S I E G p.540
. . . . | 11 . . g.110101
AACCGATTGACATATGAAAAGAGGTACTCCTCCCCACACCAG | TCTTTGTTGAGCATCCGT c.1680
N R L T Y E K R Y S S P H Q | S L L S I R p.560
. . . . . . g.110161
GGCTCCCTATTTTCACCAAGGCGAAATAGCAGAACAAGCCTTTTCAGCTTTAGAGGGCGA c.1740
G S L F S P R R N S R T S L F S F R G R p.580
. . . . . . g.110221
GCAAAGGATGTGGGATCTGAGAACGACTTCGCAGATGATGAGCACAGCACCTTTGAGGAT c.1800
A K D V G S E N D F A D D E H S T F E D p.600
. . . . . . g.110281
AACGAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGAGACGCAACAGC c.1860
N E S R R D S L F V P R R H G E R R N S p.620
. . . . . . g.110341
AACCTGAGTCAGACCAGTAGGTCATCCCGGATGCTGGCAGTGTTTCCAGCGAATGGGAAG c.1920
N L S Q T S R S S R M L A V F P A N G K p.640
. . . . . . g.110401
ATGCACAGCACTGTGGATTGCAATGGTGTGGTTTCCTTGGTTGGTGGACCTTCAGTTCCT c.1980
M H S T V D C N G V V S L V G G P S V P p.660
. . . . . . g.110461
ACATCGCCTGTTGGACAGCTTCTGCCAGAGGTGATAATAGATAAGCCAGCTACTGATGAC c.2040
T S P V G Q L L P E V I I D K P A T D D p.680
| 12 . . . . . . g.111765
AAT | GGAACAACCACTGAAACTGAAATGAGAAAGAGAAGGTCAAGTTCTTTCCACGTTTCC c.2100
N | G T T T E T E M R K R R S S S F H V S p.700
. . . . . . g.111825
ATGGACTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGCATTCTA c.2160
M D F L E D P S Q R Q R A M S I A S I L p.720
. | 13 . . . . . g.112707
ACAAATACAGTAGAAG | AACTTGAAGAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAA c.2220
T N T V E E | L E E S R Q K C P P C W Y K p.740
. . . . . . g.112767
TTTTCCAACATATTCTTAATCTGGGACTGTTCTCCATATTGGTTAAAAGTGAAACATGTT c.2280
F S N I F L I W D C S P Y W L K V K H V p.760
. . . . . . g.112827
GTCAACCTGGTTGTGATGGACCCATTTGTTGACCTGGCCATCACCATCTGTATTGTCTTA c.2340
V N L V V M D P F V D L A I T I C I V L p.780
. . . . . . g.112887
AATACTCTTTTCATGGCCATGGAGCACTATCCAATGACGGACCATTTCAATAATGTGCTT c.2400
N T L F M A M E H Y P M T D H F N N V L p.800
. | 14 . . . . . g.114581
ACAGTAGGAAACTTG | GTTTTCACTGGGATCTTTACAGCAGAAATGTTTCTGAAAATTATT c.2460
T V G N L | V F T G I F T A E M F L K I I p.820
. . . . . . g.114641
GCCATGGATCCTTACTATTATTTCCAAGAAGGCTGGAATATCTTTGACGGTTTTATTGTG c.2520
A M D P Y Y Y F Q E G W N I F D G F I V p.840
. . . . . . g.114701
ACGCTTAGCCTGGTAGAACTTGGACTCGCCAATGTGGAAGGATTATCTGTTCTCCGTTCA c.2580
T L S L V E L G L A N V E G L S V L R S p.860
| 15 . . . . . g.116051
TTTCGATTG | CTGCGAGTTTTCAAGTTGGCAAAATCTTGGCCAACGTTAAATATGCTAATA c.2640
F R L | L R V F K L A K S W P T L N M L I p.880
. . . . . . g.116111
AAGATCATCGGCAATTCCGTGGGGGCTCTGGGAAATTTAACCCTCGTCTTGGCCATCATC c.2700
K I I G N S V G A L G N L T L V L A I I p.900
. . . . . . g.116171
GTCTTCATTTTTGCCGTGGTCGGCATGCAGCTCTTTGGTAAAAGCTACAAAGATTGTGTC c.2760
V F I F A V V G M Q L F G K S Y K D C V p.920
. . . . . . g.116231
TGCAAGATCGCCAGTGATTGTCAACTCCCACGCTGGCACATGAATGACTTCTTCCACTCC c.2820
C K I A S D C Q L P R W H M N D F F H S p.940
. . . . . . g.116291
TTCCTGATTGTGTTCCGCGTGCTGTGTGGGGAGTGGATAGAGACCATGTGGGACTGTATG c.2880
F L I V F R V L C G E W I E T M W D C M p.960
. . . . . . g.116351
GAGGTTGCTGGTCAAGCCATGTGCCTTACTGTCTTCATGATGGTCATGGTGATTGGAAAC c.2940
E V A G Q A M C L T V F M M V M V I G N p.980
| 16 . . . . . . g.117656
CTAGTG | GTCCTGAATCTCTTTCTGGCCTTGCTTCTGAGCTCATTTAGTGCAGACAACCTT c.3000
L V | V L N L F L A L L L S S F S A D N L p.1000
. . . . . . g.117716
GCAGCCACTGATGATGATAATGAAATGAATAATCTCCAAATTGCTGTGGATAGGATGCAC c.3060
A A T D D D N E M N N L Q I A V D R M H p.1020
. . . . . . g.117776
AAAGGAGTAGCTTATGTGAAAAGAAAAATATATGAATTTATTCAACAGTCCTTCATTAGG c.3120
K G V A Y V K R K I Y E F I Q Q S F I R p.1040
. . . . . . g.117836
AAACAAAAGATTTTAGATGAAATTAAACCACTTGATGATCTAAACAACAAGAAAGACAGT c.3180
K Q K I L D E I K P L D D L N N K K D S p.1060
. . . . . . g.117896
TGTATGTCCAATCATACAGCAGAAATTGGGAAAGATCTTGACTATCTTAAAGATGTAAAT c.3240
C M S N H T A E I G K D L D Y L K D V N p.1080
. . . . . . g.117956
GGAACTACAAGTGGTATAGGAACTGGCAGCAGTGTTGAAAAATACATTATTGATGAAAGT c.3300
G T T S G I G T G S S V E K Y I I D E S p.1100
. . . . . . g.118016
GATTACATGTCATTCATAAACAACCCCAGTCTTACTGTGACTGTACCAATTGCTGTAGGA c.3360
D Y M S F I N N P S L T V T V P I A V G p.1120
. . . . . . g.118076
GAATCTGACTTTGAAAATTTAAACACGGAAGACTTTAGTAGTGAATCGGATCTGGAAGAA c.3420
E S D F E N L N T E D F S S E S D L E E p.1140
| 17 . . . . . g.138456
AGCAAAGAG | AAACTGAATGAAAGCAGTAGCTCATCAGAAGGTAGCACTGTGGACATCGGC c.3480
S K E | K L N E S S S S S E G S T V D I G p.1160
. . . . . . g.138516
GCACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTGAACCAGAAGCTTGT c.3540
A P V E E Q P V V E P E E T L E P E A C p.1180
. | 18 . . . . . g.140284
TTCACTGAAG | GCTGTGTACAAAGATTCAAGTGTTGTCAAATCAATGTGGAAGAAGGCAGA c.3600
F T E G | C V Q R F K C C Q I N V E E G R p.1200
. . . . . . g.140344
GGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAGTTGAACATAACTGGTTT c.3660
G K Q W W N L R R T C F R I V E H N W F p.1220
. . . . | 19 . . g.141865
GAGACCTTCATTGTTTTCATGATTCTCCTTAGTAGTGGTGCTCTG | GCATTTGAAGATATA c.3720
E T F I V F M I L L S S G A L | A F E D I p.1240
. . . . . . g.141925
TATATTGATCAGCGAAAGACGATTAAGACGATGTTGGAATATGCTGACAAGGTTTTCACT c.3780
Y I D Q R K T I K T M L E Y A D K V F T p.1260
. . . . . . g.141985
TACATTTTCATTCTGGAAATGCTTCTAAAATGGGTGGCATATGGCTATCAAACATATTTC c.3840
Y I F I L E M L L K W V A Y G Y Q T Y F p.1280
. . . | 20 . . g.144312
ACCAATGCCTGGTGTTGGCTGGACTTCTTAATTGTTGAT | GTTTCATTGGTCAGTTTAACA c.3900
T N A W C W L D F L I V D | V S L V S L T p.1300
. . . . . . g.144372
GCAAATGCCTTGGGTTACTCAGAACTTGGAGCCATCAAATCTCTCAGGACACTAAGAGCT c.3960
A N A L G Y S E L G A I K S L R T L R A p.1320
. . . . | 21 . . g.151397
CTGAGACCTCTAAGAGCCTTATCTCGATTTGAAGGGATGAGG | GTGGTTGTGAATGCCCTT c.4020
L R P L R A L S R F E G M R | V V V N A L p.1340
. . . . . . g.151457
TTAGGAGCAATTCCATCCATCATGAATGTGCTTCTGGTTTGTCTTATATTCTGGCTAATT c.4080
L G A I P S I M N V L L V C L I F W L I p.1360
. . . . . . g.151517
TTCAGCATCATGGGCGTAAATTTGTTTGCTGGCAAATTCTACCACTGTATTAACACCACA c.4140
F S I M G V N L F A G K F Y H C I N T T p.1380
. . . . . . g.151577
ACTGGTGACAGGTTTGACATCGAAGACGTGAATAATCATACTGATTGCCTAAAACTAATA c.4200
T G D R F D I E D V N N H T D C L K L I p.1400
. . . . . . g.151637
GAAAGAAATGAGACTGCTCGATGGAAAAATGTGAAAGTAAACTTTGATAATGTAGGATTT c.4260
E R N E T A R W K N V K V N F D N V G F p.1420
. . | 22 . . . . g.154392
GGGTATCTCTCTTTGCTTCAAGTT | GCCACATTCAAAGGATGGATGGATATAATGTATGCA c.4320
G Y L S L L Q V | A T F K G W M D I M Y A p.1440
. | 23 . . . . g.155999
GCAGTTGATTCCAGAAAT | GTGGAACTCCAGCCTAAGTATGAAGAAAGTCTGTACATGTAT c.4380
A V D S R N | V E L Q P K Y E E S L Y M Y p.1460
. . . . . . g.156059
CTTTACTTTGTTATTTTCATCATCTTTGGGTCCTTCTTCACCTTGAACCTGTTTATTGGT c.4440
L Y F V I F I I F G S F F T L N L F I G p.1480
. . . | 24 . . . g.158039
GTCATCATAGATAATTTCAACCAGCAGAAAAAGAAG | TTTGGAGGTCAAGACATCTTTATG c.4500
V I I D N F N Q Q K K K | F G G Q D I F M p.1500
. . . . . . g.158099
ACAGAAGAACAGAAGAAATACTATAATGCAATGAAAAAATTAGGATCGAAAAAACCGCAA c.4560
T E E Q K K Y Y N A M K K L G S K K P Q p.1520
. . | 25 . . . . g.159755
AAGCCTATACCTCGACCAGGA | AACAAATTTCAAGGAATGGTCTTTGACTTCGTAACCAGA c.4620
K P I P R P G | N K F Q G M V F D F V T R p.1540
. . . . . . g.159815
CAAGTTTTTGACATAAGCATCATGATTCTCATCTGTCTTAACATGGTCACAATGATGGTG c.4680
Q V F D I S I M I L I C L N M V T M M V p.1560
. . . . . . g.159875
GAAACAGATGACCAGAGTGAATATGTGACTACCATTTTGTCACGCATCAATCTGGTGTTC c.4740
E T D D Q S E Y V T T I L S R I N L V F p.1580
. . . . . . g.159935
ATTGTGCTATTTACTGGAGAGTGTGTACTGAAACTCATCTCTCTACGCCATTATTATTTT c.4800
I V L F T G E C V L K L I S L R H Y Y F p.1600
. . . . . | 26 . g.161718
ACCATTGGATGGAATATTTTTGATTTTGTGGTTGTCATTCTCTCCATTGTAG | GTATGTTT c.4860
T I G W N I F D F V V V I L S I V G | M F p.1620
. . . . . . g.161778
CTTGCCGAGCTGATAGAAAAGTATTTCGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTT c.4920
L A E L I E K Y F V S P T L F R V I R L p.1640
. . . . . . g.161838
GCTAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGGGGATCCGCACGCTGCTC c.4980
A R I G R I L R L I K G A K G I R T L L p.1660
. . . . . . g.161898
TTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACATCGGCCTCCTACTCTTCCTAGTC c.5040
F A L M M S L P A L F N I G L L L F L V p.1680
. . . . . . g.161958
ATGTTCATCTACGCCATCTTTGGGATGTCCAACTTTGCCTATGTTAAGAGGGAAGTTGGG c.5100
M F I Y A I F G M S N F A Y V K R E V G p.1700
. . . . . . g.162018
ATCGATGACATGTTCAACTTTGAGACCTTTGGCAACAGCATGATCTGCCTATTCCAAATT c.5160
I D D M F N F E T F G N S M I C L F Q I p.1720
. . . . . . g.162078
ACAACCTCTGCTGGCTGGGATGGATTGCTAGCACCCATTCTCAACAGTAAGCCACCCGAC c.5220
T T S A G W D G L L A P I L N S K P P D p.1740
. . . . . . g.162138
TGTGACCCTAATAAAGTTAACCCTGGAAGCTCAGTTAAGGGAGACTGTGGGAACCCATCT c.5280
C D P N K V N P G S S V K G D C G N P S p.1760
. . . . . . g.162198
GTTGGAATTTTCTTTTTTGTCAGTTACATCATCATATCCTTCCTGGTTGTGGTGAACATG c.5340
V G I F F F V S Y I I I S F L V V V N M p.1780
. . . . . . g.162258
TACATCGCGGTCATCCTGGAGAACTTCAGTGTTGCTACTGAAGAAAGTGCAGAGCCTCTG c.5400
Y I A V I L E N F S V A T E E S A E P L p.1800
. . . . . . g.162318
AGTGAGGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCAACT c.5460
S E D D F E M F Y E V W E K F D P D A T p.1820
. . . . . . g.162378
CAGTTCATGGAATTTGAAAAATTATCTCAGTTTGCAGCTGCGCTTGAACCGCCTCTCAAT c.5520
Q F M E F E K L S Q F A A A L E P P L N p.1840
. . . . . . g.162438
CTGCCACAACCAAACAAACTCCAGCTCATTGCCATGGATTTGCCCATGGTGAGTGGTGAC c.5580
L P Q P N K L Q L I A M D L P M V S G D p.1860
. . . . . . g.162498
CGGATCCACTGTCTTGATATCTTATTTGCTTTTACAAAGCGGGTTCTAGGAGAGAGTGGA c.5640
R I H C L D I L F A F T K R V L G E S G p.1880
. . . . . . g.162558
GAGATGGATGCTCTACGAATACAGATGGAAGAGCGATTCATGGCTTCCAATCCTTCCAAG c.5700
E M D A L R I Q M E E R F M A S N P S K p.1900
. . . . . . g.162618
GTCTCCTATCAGCCAATCACTACTACTTTAAAACGAAAACAAGAGGAAGTATCTGCTGTC c.5760
V S Y Q P I T T T L K R K Q E E V S A V p.1920
. . . . . . g.162678
ATTATTCAGCGTGCTTACAGACGCCACCTTTTAAAGCGAACTGTAAAACAAGCTTCCTTT c.5820
I I Q R A Y R R H L L K R T V K Q A S F p.1940
. . . . . . g.162738
ACGTACAATAAAAACAAAATCAAAGGTGGGGCTAATCTTCTTATAAAAGAAGACATGATA c.5880
T Y N K N K I K G G A N L L I K E D M I p.1960
. . . . . . g.162798
ATTGACAGAATAAATGAAAACTCTATTACAGAAAAAACTGATCTGACCATGTCCACTGCA c.5940
I D R I N E N S I T E K T D L T M S T A p.1980
. . . . . . g.162858
GCTTGTCCACCTTCCTATGACCGGGTGACAAAGCCAATTGTGGAAAAACATGAGCAAGAA c.6000
A C P P S Y D R V T K P I V E K H E Q E p.2000
. . . g.162888
GGCAAAGATGAAAAAGCCAAAGGGAAATAA c.6030
G K D E K A K G K X p.2009
. . . . . . g.162948
atgaaaataaataaaaataattgggtgacaaattgtttacagcctgtgaaggtgatgtat c.*60
. . . . . . g.163008
ttttatcaacaggactcctttaggaggtcaatgccaaactgactgtttttacacaaatct c.*120
. . . . . . g.163068
ccttaaggtcagtgcctacaataagacagtgaccccttgtcagcaaactgtgactctgtg c.*180
. . . . . . g.163128
taaaggggagatgaccttgacaggaggttactgttctcactaccagctgacactgctgaa c.*240
. . . . . . g.163188
gataagatgcacaatggctagtcagactgtagggaccagtttcaaggggtgcaaacctgt c.*300
. . . . . . g.163248
gattttggggttgtttaacatgaaacactttagtgtagtaattgtatccactgtttgcat c.*360
. . . . . . g.163308
ttcaactgccacatttgtcacatttttatggaatctgttagtggattcatctttttgtta c.*420
. . . . . . g.163368
atccatgtgtttattatatgtgactatttttgtaaacgaagtttctgttgagaaataggc c.*480
. . . . . . g.163428
taaggacctctataacaggtatgccacctggggggtatggcaaccacatggccctcccag c.*540
. . . . . . g.163488
ctacacaaagtcgtggtttgcatgagggcatgctgcacttagagatcatgcatgagaaaa c.*600
. . . . . . g.163548
agtcacaagaaaaacaaattcttaaatttcaccatatttctgggaggggtaattgggtga c.*660
. . . . . . g.163608
taagtggaggtgctttgttgatcttgttttgcgaaatccagcccctagaccaagtagatt c.*720
. . . . . . g.163668
atttgtgggtaggccagtaaatcttagcaggtgcaaacttcattcaaatgtttggagtca c.*780
. . . . . . g.163728
taaatgttatgtttctttttgttgtattaaaaaaaaaacctgaatagtgaatattgcccc c.*840
. . . . . . g.163788
tcaccctccaccgccagaagactgaattgaccaaaattactctttataaatttctgcttt c.*900
. . . . . . g.163848
ttcctgcactttgtttagccatcttcggctctcagcaaggttgacactgtatatgttaat c.*960
. . . . . . g.163908
gaaatgctatttattatgtaaatagtcattttaccctgtggtgcacgtttgagcaaacaa c.*1020
. . . . . . g.163968
ataatgacctaagcacagtatttattgcatcaaatatgtaccacaagaaatgtagagtgc c.*1080
. . . . . . g.164028
aagctttacacaggtaataaaatgtattctgtaccatttatagatagtttggatgctatc c.*1140
. . . . . . g.164088
aatgcatgtttatattaccatgctgctgtatctggtttctctcactgctcagaatctcat c.*1200
. . . . . . g.164148
ttatgagaaaccatatgtcagtggtaaagtcaaggaaattgttcaacagatctcatttat c.*1260
. . . . . . g.164208
ttaagtcattaagcaatagtttgcagcactttaacagctttttggttatttttacatttt c.*1320
. . . . . . g.164268
aagtggataacatatggtatatagccagactgtacagacatgtttaaaaaaacacactgc c.*1380
. . . . . . g.164328
ttaacctattaaatatgtgtttagaattttataagcaaatataaatactgtaaaaagtca c.*1440
. . . . . . g.164388
ctttattttatttttcagcattatgtacataaatatgaagaggaaattatcttcaggttg c.*1500
. . . . . . g.164448
atatcacaatcacttttcttactttctgtccatagtactttttcatgaaagaaatttgct c.*1560
. . . . . . g.164508
aaataagacatgaaaacaagactgggtagttgtagatttctgctttttaaattacatttg c.*1620
. . . . . . g.164568
ctaattttagattatttcacaattttaaggagcaaaataggttcacgattcatatccaaa c.*1680
. . . . . . g.164628
ttatgctttgcaattggaaaagggtttaaaattttatttatatttctggtagtacctgca c.*1740
. . . . . . g.164688
ctaactgaattgaaggtagtgcttatgttatttttgttctttttttctgacttcggttta c.*1800
. . . . . . g.164748
tgttttcatttctttggagtaatgctgctctagattgttctaaatagaatgtgggcttca c.*1860
. . . . . . g.164808
taatttttttttccacaaaaacagagtagtcaacttatatagtcaattacatcaggacat c.*1920
. . . . . . g.164868
tttgtgtttcttacagaagcaaaccataggctcctcttttccttaaaactacttagataa c.*1980
. . . . . . g.164928
actgtattcgtgaactgcatgctggaaaatgctactattatgctaaataatgctaaccaa c.*2040
. . . . g.164973
catttaaaatgtgcaaaactaataaagattacattttttatttta c.*2085
(downstream sequence)
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