sodium channel, voltage-gated, type III, alpha subunit (SCN3A) - coding DNA reference sequence

(used for variant description)

(last modified November 14, 2018)


This file was created to facilitate the description of sequence variants on transcript NM_006922.3 in the SCN3A gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_042289.1, covering SCN3A transcript NM_006922.3.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                                   .                g.5033
                                                 accatagagtga       c.-481

 .         .         .         .         .         .                g.5093
 atctcagaacaggaagcggaggcataagcagagaggattctggaaaggtctctttgtttt       c.-421

 .         .         .         .         .         .                g.5153
 cttatccacagagaaagaaagaaaaaaaattgtaactaatttgtaaacctctgtggtcaa       c.-361

 .         .         .         .         .         .                g.5213
 aaaaaaaaaaaaaaaaaaaagctgaacagctgcagaggaagacacgttataccctaacca       c.-301

 .         .         .         .         .         .   | 02         g.22348
 tcttggatgctgggctttgttatgctgtaattcataaggctctgttttatcag | agattat    c.-241

 .         .         .         .         .         .                g.22408
 ggagcaagaaaactgaagccaagccacatcaaggtttgacagggatgagatacctgtcaa       c.-181

 .         .         .         .         .         .                g.22468
 ggattcatagtagagtggcttactgggaaaggagcaaagaatctcttctagggatattgt       c.-121

 .         .         .         .         .         .                g.22528
 aagaataaatgagataattcacagaagggacctggagcttttccggaaaaaggtgctgtg       c.-61

 .          | 03        .         .         .         .             g.32694
 actatctaag | gtaattcgtatgcaagaagctacacgtaattaaatgtgcaggatgaaaag    c.-1

          .         .         .         .         .         .       g.32754
 ATGGCACAGGCACTGTTGGTACCCCCAGGACCTGAAAGCTTCCGCCTTTTTACTAGAGAA       c.60
 M  A  Q  A  L  L  V  P  P  G  P  E  S  F  R  L  F  T  R  E         p.20

          .         .         .         .         .         .       g.32814
 TCTCTTGCTGCTATCGAAAAACGTGCTGCAGAAGAGAAAGCCAAGAAGCCCAAAAAGGAA       c.120
 S  L  A  A  I  E  K  R  A  A  E  E  K  A  K  K  P  K  K  E         p.40

          .         .         .         .         .         .       g.32874
 CAAGATAATGATGATGAGAACAAACCAAAGCCAAATAGTGACTTGGAAGCTGGAAAGAAC       c.180
 Q  D  N  D  D  E  N  K  P  K  P  N  S  D  L  E  A  G  K  N         p.60

          .         .         .         .         .         .       g.32934
 CTTCCATTTATTTATGGAGACATTCCTCCAGAGATGGTGTCAGAGCCCCTGGAGGACCTG       c.240
 L  P  F  I  Y  G  D  I  P  P  E  M  V  S  E  P  L  E  D  L         p.80

          .         .     | 04   .         .         .         .    g.38576
 GATCCCTACTATATCAATAAGAAA | ACTTTTATAGTAATGAATAAAGGAAAGGCAATTTTC    c.300
 D  P  Y  Y  I  N  K  K   | T  F  I  V  M  N  K  G  K  A  I  F      p.100

          .         .         .         .         .         .       g.38636
 CGATTCAGTGCCACCTCTGCCTTGTATATTTTAACTCCACTAAACCCTGTTAGGAAAATT       c.360
 R  F  S  A  T  S  A  L  Y  I  L  T  P  L  N  P  V  R  K  I         p.120

          .         .    | 05    .         .         .         .    g.40300
 GCTATCAAGATTTTGGTACATTC | TTTATTCAGCATGCTTATCATGTGCACTATTTTGACC    c.420
 A  I  K  I  L  V  H  S  |  L  F  S  M  L  I  M  C  T  I  L  T      p.140

          .         .         .         .         .    | 06    .    g.44575
 AACTGTGTATTTATGACCTTGAGCAACCCTCCTGACTGGACAAAGAATGTAGA | GTACACA    c.480
 N  C  V  F  M  T  L  S  N  P  P  D  W  T  K  N  V  E  |  Y  T      p.160

          .         .         .         .         .         .       g.44635
 TTCACTGGAATCTATACCTTTGAGTCACTTATAAAAATCTTGGCAAGAGGGTTTTGCTTA       c.540
 F  T  G  I  Y  T  F  E  S  L  I  K  I  L  A  R  G  F  C  L         p.180

          .         .         .         .         .         .       g.44695
 GAAGATTTTACGTTTCTTCGTGATCCATGGAACTGGCTGGATTTCAGTGTCATTGTGATG       c.600
 E  D  F  T  F  L  R  D  P  W  N  W  L  D  F  S  V  I  V  M         p.200

    | 07     .         .         .         .         .         .    g.45437
 GC | ATATGTGACAGAGTTTGTGGACCTGGGCAATGTCTCAGCGTTGAGAACATTCAGAGTT    c.660
 A  |  Y  V  T  E  F  V  D  L  G  N  V  S  A  L  R  T  F  R  V      p.220

          .         .         .     | 08   .         .         .    g.46286
 CTCCGAGCACTGAAAACAATTTCAGTCATTCCAG | GTTTAAAGACCATTGTGGGGGCCCTG    c.720
 L  R  A  L  K  T  I  S  V  I  P  G |   L  K  T  I  V  G  A  L      p.240

          .         .         .         .         .         .       g.46346
 ATCCAGTCGGTAAAGAAGCTTTCTGATGTGATGATCCTGACTGTGTTCTGTCTGAGCGTG       c.780
 I  Q  S  V  K  K  L  S  D  V  M  I  L  T  V  F  C  L  S  V         p.260

          .         .         .         .         .         .       g.46406
 TTTGCTCTCATTGGGCTGCAGCTGTTCATGGGCAATCTGAGGAATAAATGTTTGCAGTGG       c.840
 F  A  L  I  G  L  Q  L  F  M  G  N  L  R  N  K  C  L  Q  W         p.280

          .         .         .         .         .         .       g.46466
 CCCCCAAGCGATTCTGCTTTTGAAACCAACACCACTTCCTACTTTAATGGCACAATGGAT       c.900
 P  P  S  D  S  A  F  E  T  N  T  T  S  Y  F  N  G  T  M  D         p.300

          .         .         .         .         .         .       g.46526
 TCAAATGGGACATTTGTTAATGTAACAATGAGCACATTTAACTGGAAGGATTACATTGGA       c.960
 S  N  G  T  F  V  N  V  T  M  S  T  F  N  W  K  D  Y  I  G         p.320

         | 09.         .         .         .         .         .    g.46770
 GATGACA | GTCACTTTTATGTTTTGGATGGGCAAAAAGACCCTTTACTCTGTGGAAATGGC    c.1020
 D  D  S |   H  F  Y  V  L  D  G  Q  K  D  P  L  L  C  G  N  G      p.340

          .  | 10      .         .         .         .         .    g.53234
 TCAGATGCAGG | CCAGTGTCCAGAAGGATACATCTGTGTGAAGGCTGGTCGAAACCCCAAC    c.1080
 S  D  A  G  |  Q  C  P  E  G  Y  I  C  V  K  A  G  R  N  P  N      p.360

          .         .         .         .         .         .       g.53294
 TATGGCTACACAAGCTTTGACACCTTTAGCTGGGCTTTCCTGTCTCTATTTCGACTCATG       c.1140
 Y  G  Y  T  S  F  D  T  F  S  W  A  F  L  S  L  F  R  L  M         p.380

          .         .         .    | 11    .         .         .    g.54457
 ACTCAAGACTACTGGGAAAATCTTTACCAGTTG | ACATTACGTGCTGCTGGGAAAACATAC    c.1200
 T  Q  D  Y  W  E  N  L  Y  Q  L   | T  L  R  A  A  G  K  T  Y      p.400

          .         .         .         .         .         .       g.54517
 ATGATATTTTTTGTCCTGGTCATTTTCTTGGGCTCATTTTATTTGGTGAATTTGATCCTG       c.1260
 M  I  F  F  V  L  V  I  F  L  G  S  F  Y  L  V  N  L  I  L         p.420

          .         .         .         .         .         .       g.54577
 GCTGTGGTGGCCATGGCCTATGAGGAGCAGAATCAGGCCACCTTGGAAGAAGCAGAACAA       c.1320
 A  V  V  A  M  A  Y  E  E  Q  N  Q  A  T  L  E  E  A  E  Q         p.440

          .         .         .         .         .         .       g.54637
 AAAGAGGCCGAATTTCAGCAGATGCTCGAACAGCTTAAAAAGCAACAGGAAGAAGCTCAG       c.1380
 K  E  A  E  F  Q  Q  M  L  E  Q  L  K  K  Q  Q  E  E  A  Q         p.460

  | 12       .         .         .         .         .         .    g.62119
  | GCAGTTGCGGCAGCATCAGCTGCTTCAAGAGATTTCAGTGGAATAGGTGGGTTAGGAGAG    c.1440
  | A  V  A  A  A  S  A  A  S  R  D  F  S  G  I  G  G  L  G  E      p.480

          .         .         .         .         .         .       g.62179
 CTGTTGGAAAGTTCTTCAGAAGCATCAAAGTTGAGTTCCAAAAGTGCTAAAGAATGGAGG       c.1500
 L  L  E  S  S  S  E  A  S  K  L  S  S  K  S  A  K  E  W  R         p.500

          .         .         .         .         .         .       g.62239
 AACCGAAGGAAGAAAAGAAGACAGAGAGAGCACCTTGAAGGAAACAACAAAGGAGAGAGA       c.1560
 N  R  R  K  K  R  R  Q  R  E  H  L  E  G  N  N  K  G  E  R         p.520

          .         .         .         .         .         .       g.62299
 GACAGCTTTCCCAAATCCGAATCTGAAGACAGCGTCAAAAGAAGCAGCTTCCTTTTCTCC       c.1620
 D  S  F  P  K  S  E  S  E  D  S  V  K  R  S  S  F  L  F  S         p.540

          .         .         .         .         .  | 13      .    g.68099
 ATGGATGGAAACAGACTGACCAGTGACAAAAAATTCTGCTCCCCTCATCAG | TCTCTCTTG    c.1680
 M  D  G  N  R  L  T  S  D  K  K  F  C  S  P  H  Q   | S  L  L      p.560

          .         .         .         .         .         .       g.68159
 AGTATCCGTGGCTCCCTGTTTTCCCCAAGACGCAATAGCAAAACAAGCATTTTCAGTTTC       c.1740
 S  I  R  G  S  L  F  S  P  R  R  N  S  K  T  S  I  F  S  F         p.580

          .         .         .         .         .         .       g.68219
 AGAGGTCGGGCAAAGGATGTTGGATCTGAAAATGACTTTGCTGATGATGAACACAGCACA       c.1800
 R  G  R  A  K  D  V  G  S  E  N  D  F  A  D  D  E  H  S  T         p.600

          .         .         .         .         .         .       g.68279
 TTTGAAGACAGCGAAAGCAGGAGAGACTCACTGTTTGTGCCGCACAGACATGGAGAGCGA       c.1860
 F  E  D  S  E  S  R  R  D  S  L  F  V  P  H  R  H  G  E  R         p.620

          .         .         .         .         .         .       g.68339
 CGCAACAGTAACGTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGCTTCCAGCA       c.1920
 R  N  S  N  V  S  Q  A  S  M  S  S  R  M  V  P  G  L  P  A         p.640

          .         .         .         .         .         .       g.68399
 AATGGGAAGATGCACAGCACTGTGGATTGCAATGGTGTGGTTTCCTTGGTGGGTGGACCT       c.1980
 N  G  K  M  H  S  T  V  D  C  N  G  V  V  S  L  V  G  G  P         p.660

          .         .         .          | 14        .         .    g.69501
 TCAGCTCTAACGTCACCTACTGGACAACTTCCCCCAGAG | GGCACCACCACAGAAACGGAA    c.2040
 S  A  L  T  S  P  T  G  Q  L  P  P  E   | G  T  T  T  E  T  E      p.680

          .         .         .         .         .         .       g.69561
 GTCAGAAAGAGAAGGTTAAGCTCTTACCAGATTTCAATGGAGATGCTGGAGGATTCCTCT       c.2100
 V  R  K  R  R  L  S  S  Y  Q  I  S  M  E  M  L  E  D  S  S         p.700

          .         .         .         .         .   | 15     .    g.70979
 GGAAGGCAAAGAGCCGTGAGCATAGCCAGCATTCTGACCAACACAATGGAAG | AACTTGAA    c.2160
 G  R  Q  R  A  V  S  I  A  S  I  L  T  N  T  M  E  E |   L  E      p.720

          .         .         .         .         .         .       g.71039
 GAATCTAGACAGAAATGTCCGCCATGCTGGTATAGATTTGCCAATGTGTTCTTGATCTGG       c.2220
 E  S  R  Q  K  C  P  P  C  W  Y  R  F  A  N  V  F  L  I  W         p.740

          .         .         .         .         .         .       g.71099
 GACTGCTGTGATGCATGGTTAAAAGTAAAACATCTTGTGAATTTAATTGTTATGGATCCA       c.2280
 D  C  C  D  A  W  L  K  V  K  H  L  V  N  L  I  V  M  D  P         p.760

          .         .         .         .         .         .       g.71159
 TTTGTTGATCTTGCCATCACTATTTGCATTGTCTTAAATACCCTCTTTATGGCCATGGAG       c.2340
 F  V  D  L  A  I  T  I  C  I  V  L  N  T  L  F  M  A  M  E         p.780

          .         .         .         .         .  | 16      .    g.77680
 CACTACCCCATGACTGAGCAATTCAGTAGTGTGTTGACTGTAGGAAACCTG | GTCTTTACT    c.2400
 H  Y  P  M  T  E  Q  F  S  S  V  L  T  V  G  N  L   | V  F  T      p.800

          .         .         .         .         .         .       g.77740
 GGGATTTTCACAGCAGAAATGGTTCTCAAGATCATTGCCATGGATCCTTATTACTATTTC       c.2460
 G  I  F  T  A  E  M  V  L  K  I  I  A  M  D  P  Y  Y  Y  F         p.820

          .         .         .         .         .         .       g.77800
 CAAGAAGGCTGGAATATCTTTGATGGAATTATTGTCAGCCTCAGTTTAATGGAGCTTGGT       c.2520
 Q  E  G  W  N  I  F  D  G  I  I  V  S  L  S  L  M  E  L  G         p.840

          .         .         .         .      | 17  .         .    g.78807
 CTGTCAAATGTGGAGGGATTGTCTGTACTGCGATCATTCAGACTG | CTTAGAGTTTTCAAG    c.2580
 L  S  N  V  E  G  L  S  V  L  R  S  F  R  L   | L  R  V  F  K      p.860

          .         .         .         .         .         .       g.78867
 TTGGCAAAATCCTGGCCCACACTAAATATGCTAATTAAGATCATTGGCAATTCTGTGGGG       c.2640
 L  A  K  S  W  P  T  L  N  M  L  I  K  I  I  G  N  S  V  G         p.880

          .         .         .         .         .         .       g.78927
 GCTCTAGGAAACCTCACCTTGGTGTTGGCCATCATCGTCTTCATTTTTGCTGTGGTCGGC       c.2700
 A  L  G  N  L  T  L  V  L  A  I  I  V  F  I  F  A  V  V  G         p.900

          .         .         .         .         .         .       g.78987
 ATGCAGCTCTTTGGTAAGAGCTACAAAGAATGTGTCTGCAAGATCAATGATGACTGTACG       c.2760
 M  Q  L  F  G  K  S  Y  K  E  C  V  C  K  I  N  D  D  C  T         p.920

          .         .         .         .         .         .       g.79047
 CTCCCACGGTGGCACATGAACGACTTCTTCCACTCCTTCCTGATTGTGTTCCGCGTGCTG       c.2820
 L  P  R  W  H  M  N  D  F  F  H  S  F  L  I  V  F  R  V  L         p.940

          .         .         .         .         .         .       g.79107
 TGTGGAGAGTGGATAGAGACCATGTGGGACTGTATGGAGGTCGCTGGCCAAACCATGTGC       c.2880
 C  G  E  W  I  E  T  M  W  D  C  M  E  V  A  G  Q  T  M  C         p.960

          .         .         .         .   | 18     .         .    g.81005
 CTTATTGTTTTCATGTTGGTCATGGTCATTGGAAACCTTGTG | GTTCTGAACCTCTTTCTG    c.2940
 L  I  V  F  M  L  V  M  V  I  G  N  L  V   | V  L  N  L  F  L      p.980

          .         .         .         .         .         .       g.81065
 GCCTTATTGTTGAGTTCATTTAGCTCAGACAACCTTGCTGCTACTGATGATGACAATGAA       c.3000
 A  L  L  L  S  S  F  S  S  D  N  L  A  A  T  D  D  D  N  E         p.1000

          .         .         .         .         .         .       g.81125
 ATGAATAATCTGCAGATTGCAGTAGGAAGAATGCAAAAGGGAATTGATTATGTGAAAAAT       c.3060
 M  N  N  L  Q  I  A  V  G  R  M  Q  K  G  I  D  Y  V  K  N         p.1020

          .         .         .         .         .         .       g.81185
 AAGATGCGGGAGTGTTTCCAAAAAGCCTTTTTTAGAAAGCCAAAAGTTATAGAAATCCAT       c.3120
 K  M  R  E  C  F  Q  K  A  F  F  R  K  P  K  V  I  E  I  H         p.1040

          .         .         .         .         .         .       g.81245
 GAAGGCAATAAGATAGACAGCTGCATGTCCAATAATACTGGAATTGAAATAAGCAAAGAG       c.3180
 E  G  N  K  I  D  S  C  M  S  N  N  T  G  I  E  I  S  K  E         p.1060

          .         .         .         .         .         .       g.81305
 CTTAATTATCTTAGAGATGGGAATGGAACCACCAGTGGTGTAGGTACTGGAAGCAGTGTT       c.3240
 L  N  Y  L  R  D  G  N  G  T  T  S  G  V  G  T  G  S  S  V         p.1080

          .         .         .         .         .         .       g.81365
 GAAAAATACGTAATCGATGAAAATGATTATATGTCATTCATAAACAACCCCAGCCTCACC       c.3300
 E  K  Y  V  I  D  E  N  D  Y  M  S  F  I  N  N  P  S  L  T         p.1100

          .         .         .         .         .         .       g.81425
 GTCACAGTGCCAATTGCTGTTGGAGAGTCTGACTTTGAAAACTTAAATACTGAAGAGTTC       c.3360
 V  T  V  P  I  A  V  G  E  S  D  F  E  N  L  N  T  E  E  F         p.1120

          .         .         .    | 19    .         .         .    g.93540
 AGCAGTGAGTCAGAACTAGAAGAAAGCAAAGAG | AAATTAAATGCAACCAGCTCATCTGAA    c.3420
 S  S  E  S  E  L  E  E  S  K  E   | K  L  N  A  T  S  S  S  E      p.1140

          .         .         .         .         .         .       g.93600
 GGAAGCACAGTTGATGTTGTTCTACCCCGAGAAGGTGAACAAGCTGAAACTGAACCCGAA       c.3480
 G  S  T  V  D  V  V  L  P  R  E  G  E  Q  A  E  T  E  P  E         p.1160

          .         .         .     | 20   .         .         .    g.95144
 GAAGACCTTAAACCGGAAGCTTGTTTTACTGAAG | GATGTATTAAAAAGTTTCCATTCTGT    c.3540
 E  D  L  K  P  E  A  C  F  T  E  G |   C  I  K  K  F  P  F  C      p.1180

          .         .         .         .         .         .       g.95204
 CAAGTAAGTACAGAAGAAGGCAAAGGGAAGATCTGGTGGAATCTTCGAAAAACCTGCTAC       c.3600
 Q  V  S  T  E  E  G  K  G  K  I  W  W  N  L  R  K  T  C  Y         p.1200

          .         .         .         .         .         .       g.95264
 AGTATTGTTGAGCACAACTGGTTTGAGACTTTCATTGTGTTCATGATCCTTCTCAGTAGT       c.3660
 S  I  V  E  H  N  W  F  E  T  F  I  V  F  M  I  L  L  S  S         p.1220

           | 21        .         .         .         .         .    g.96081
 GGTGCATTG | GCCTTTGAAGATATATACATTGAACAGCGAAAGACTATCAAAACCATGCTA    c.3720
 G  A  L   | A  F  E  D  I  Y  I  E  Q  R  K  T  I  K  T  M  L      p.1240

          .         .         .         .         .         .       g.96141
 GAATATGCTGACAAAGTCTTTACCTATATATTCATTCTGGAAATGCTTCTCAAATGGGTT       c.3780
 E  Y  A  D  K  V  F  T  Y  I  F  I  L  E  M  L  L  K  W  V         p.1260

          .         .         .         .         .         .       g.96201
 GCTTATGGATTTCAAACATATTTCACTAATGCCTGGTGCTGGCTAGATTTCTTGATCGTT       c.3840
 A  Y  G  F  Q  T  Y  F  T  N  A  W  C  W  L  D  F  L  I  V         p.1280

     | 22    .         .         .         .         .         .    g.108721
 GAT | GTTTCTTTGGTTAGCCTGGTAGCCAATGCTCTTGGCTACTCAGAACTCGGTGCCATC    c.3900
 D   | V  S  L  V  S  L  V  A  N  A  L  G  Y  S  E  L  G  A  I      p.1300

          .         .         .         .         .         .       g.108781
 AAATCATTACGGACATTAAGAGCTTTAAGACCTCTAAGAGCCTTATCCCGGTTTGAAGGC       c.3960
 K  S  L  R  T  L  R  A  L  R  P  L  R  A  L  S  R  F  E  G         p.1320

        | 23 .         .         .         .         .         .    g.111618
 ATGAGG | GTGGTTGTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATGAATGTGCTGTTG    c.4020
 M  R   | V  V  V  N  A  L  V  G  A  I  P  S  I  M  N  V  L  L      p.1340

          .         .         .         .         .         .       g.111678
 GTCTGTCTCATCTTCTGGTTGATCTTTAGCATCATGGGTGTGAATTTGTTTGCTGGCAAG       c.4080
 V  C  L  I  F  W  L  I  F  S  I  M  G  V  N  L  F  A  G  K         p.1360

          .         .         .         .         .         .       g.111738
 TTCTACCACTGTGTTAACATGACAACGGGTAACATGTTTGACATTAGTGATGTTAACAAT       c.4140
 F  Y  H  C  V  N  M  T  T  G  N  M  F  D  I  S  D  V  N  N         p.1380

          .         .         .         .         .         .       g.111798
 TTGAGTGACTGTCAGGCTCTTGGCAAGCAAGCTCGGTGGAAAAACGTGAAAGTAAACTTT       c.4200
 L  S  D  C  Q  A  L  G  K  Q  A  R  W  K  N  V  K  V  N  F         p.1400

          .         .         .          | 24        .         .    g.112589
 GATAATGTTGGCGCTGGCTATCTTGCACTGCTTCAAGTG | GCCACATTTAAAGGCTGGATG    c.4260
 D  N  V  G  A  G  Y  L  A  L  L  Q  V   | A  T  F  K  G  W  M      p.1420

          .         .         .    | 25    .         .         .    g.113467
 GATATTATGTATGCAGCTGTTGATTCACGAGAT | GTTAAACTTCAGCCTGTATATGAAGAA    c.4320
 D  I  M  Y  A  A  V  D  S  R  D   | V  K  L  Q  P  V  Y  E  E      p.1440

          .         .         .         .         .         .       g.113527
 AATCTGTACATGTATTTATACTTTGTCATCTTTATCATCTTTGGGTCATTCTTCACTCTG       c.4380
 N  L  Y  M  Y  L  Y  F  V  I  F  I  I  F  G  S  F  F  T  L         p.1460

          .         .         .         .         .  | 26      .    g.114619
 AATCTATTCATTGGTGTCATCATAGATAACTTCAACCAGCAGAAAAAGAAG | TTTGGAGGT    c.4440
 N  L  F  I  G  V  I  I  D  N  F  N  Q  Q  K  K  K   | F  G  G      p.1480

          .         .         .         .         .         .       g.114679
 CAAGACATCTTTATGACAGAGGAACAGAAAAAATATTACAATGCAATGAAGAAACTTGGA       c.4500
 Q  D  I  F  M  T  E  E  Q  K  K  Y  Y  N  A  M  K  K  L  G         p.1500

          .         .         .       | 27 .         .         .    g.116588
 TCCAAGAAACCTCAGAAACCCATACCTCGCCCAGCA | AACAAATTCCAAGGAATGGTCTTT    c.4560
 S  K  K  P  Q  K  P  I  P  R  P  A   | N  K  F  Q  G  M  V  F      p.1520

          .         .         .         .         .         .       g.116648
 GATTTTGTAACCAGACAAGTCTTTGATATCAGCATCATGATCCTCATCTGCCTCAACATG       c.4620
 D  F  V  T  R  Q  V  F  D  I  S  I  M  I  L  I  C  L  N  M         p.1540

          .         .         .         .         .         .       g.116708
 GTCACCATGATGGTGGAAACGGATGACCAGGGCAAATACATGACCCTAGTTTTGTCCCGG       c.4680
 V  T  M  M  V  E  T  D  D  Q  G  K  Y  M  T  L  V  L  S  R         p.1560

          .         .         .         .         .         .       g.116768
 ATCAACCTAGTGTTCATTGTTCTGTTCACTGGAGAATTTGTGCTGAAGCTCGTCTCCCTC       c.4740
 I  N  L  V  F  I  V  L  F  T  G  E  F  V  L  K  L  V  S  L         p.1580

          .         .         .         .         .         .       g.116828
 AGACACTACTACTTCACTATAGGCTGGAACATCTTTGACTTTGTGGTGGTGATTCTCTCC       c.4800
 R  H  Y  Y  F  T  I  G  W  N  I  F  D  F  V  V  V  I  L  S         p.1600

         | 28.         .         .         .         .         .    g.117796
 ATTGTAG | GTATGTTTCTGGCTGAGATGATAGAAAAGTATTTTGTGTCCCCTACCTTGTTC    c.4860
 I  V  G |   M  F  L  A  E  M  I  E  K  Y  F  V  S  P  T  L  F      p.1620

          .         .         .         .         .         .       g.117856
 CGAGTGATCCGTCTTGCCAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGGGG       c.4920
 R  V  I  R  L  A  R  I  G  R  I  L  R  L  I  K  G  A  K  G         p.1640

          .         .         .         .         .         .       g.117916
 ATCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACATCGGCCTC       c.4980
 I  R  T  L  L  F  A  L  M  M  S  L  P  A  L  F  N  I  G  L         p.1660

          .         .         .         .         .         .       g.117976
 CTGCTCTTCCTGGTCATGTTTATCTATGCCATCTTTGGGATGTCCAACTTTGCCTATGTT       c.5040
 L  L  F  L  V  M  F  I  Y  A  I  F  G  M  S  N  F  A  Y  V         p.1680

          .         .         .         .         .         .       g.118036
 AAAAAGGAAGCTGGAATTGATGACATGTTCAACTTTGAGACCTTTGGCAACAGCATGATC       c.5100
 K  K  E  A  G  I  D  D  M  F  N  F  E  T  F  G  N  S  M  I         p.1700

          .         .         .         .         .         .       g.118096
 TGCTTGTTCCAAATTACAACCTCTGCTGGCTGGGATGGATTGCTAGCACCTATTCTTAAT       c.5160
 C  L  F  Q  I  T  T  S  A  G  W  D  G  L  L  A  P  I  L  N         p.1720

          .         .         .         .         .         .       g.118156
 AGTGCACCACCCGACTGTGACCCTGACACAATTCACCCTGGCAGCTCAGTTAAGGGAGAC       c.5220
 S  A  P  P  D  C  D  P  D  T  I  H  P  G  S  S  V  K  G  D         p.1740

          .         .         .         .         .         .       g.118216
 TGTGGGAACCCATCTGTTGGGATTTTCTTTTTTGTCAGTTACATCATCATATCCTTCCTG       c.5280
 C  G  N  P  S  V  G  I  F  F  F  V  S  Y  I  I  I  S  F  L         p.1760

          .         .         .         .         .         .       g.118276
 GTTGTGGTGAACATGTACATCGCGGTCATCCTGGAGAACTTCAGTGTTGCTACTGAAGAA       c.5340
 V  V  V  N  M  Y  I  A  V  I  L  E  N  F  S  V  A  T  E  E         p.1780

          .         .         .         .         .         .       g.118336
 AGTGCAGAGCCCCTGAGTGAGGATGACTTTGAGATGTTCTATGAGGTTTGGGAAAAGTTT       c.5400
 S  A  E  P  L  S  E  D  D  F  E  M  F  Y  E  V  W  E  K  F         p.1800

          .         .         .         .         .         .       g.118396
 GATCCCGATGCGACCCAGTTTATAGAGTTCTCTAAACTCTCTGATTTTGCAGCTGCCCTG       c.5460
 D  P  D  A  T  Q  F  I  E  F  S  K  L  S  D  F  A  A  A  L         p.1820

          .         .         .         .         .         .       g.118456
 GATCCTCCTCTTCTCATAGCAAAACCCAACAAAGTCCAGCTTATTGCCATGGATCTGCCC       c.5520
 D  P  P  L  L  I  A  K  P  N  K  V  Q  L  I  A  M  D  L  P         p.1840

          .         .         .         .         .         .       g.118516
 ATGGTCAGTGGTGACCGGATCCACTGTCTTGATATTTTATTTGCCTTTACAAAGCGTGTT       c.5580
 M  V  S  G  D  R  I  H  C  L  D  I  L  F  A  F  T  K  R  V         p.1860

          .         .         .         .         .         .       g.118576
 TTGGGTGAGAGTGGAGAGATGGATGCCCTTCGAATACAGATGGAAGACAGGTTTATGGCA       c.5640
 L  G  E  S  G  E  M  D  A  L  R  I  Q  M  E  D  R  F  M  A         p.1880

          .         .         .         .         .         .       g.118636
 TCAAACCCCTCCAAAGTCTCTTATGAGCCTATTACAACCACTTTGAAACGTAAACAAGAG       c.5700
 S  N  P  S  K  V  S  Y  E  P  I  T  T  T  L  K  R  K  Q  E         p.1900

          .         .         .         .         .         .       g.118696
 GAGGTGTCTGCCGCTATCATTCAGCGTAATTTCAGATGTTATCTTTTAAAGCAAAGGTTA       c.5760
 E  V  S  A  A  I  I  Q  R  N  F  R  C  Y  L  L  K  Q  R  L         p.1920

          .         .         .         .         .         .       g.118756
 AAAAATATATCAAGTAACTATAACAAAGAGGCAATTAAAGGGAGGATTGACTTACCTATA       c.5820
 K  N  I  S  S  N  Y  N  K  E  A  I  K  G  R  I  D  L  P  I         p.1940

          .         .         .         .         .         .       g.118816
 AAACAAGACATGATTATTGACAAACTAAATGGGAACTCCACTCCAGAAAAAACAGATGGG       c.5880
 K  Q  D  M  I  I  D  K  L  N  G  N  S  T  P  E  K  T  D  G         p.1960

          .         .         .         .         .         .       g.118876
 AGTTCCTCTACCACCTCTCCTCCTTCCTATGATAGTGTAACAAAACCAGACAAGGAAAAG       c.5940
 S  S  S  T  T  S  P  P  S  Y  D  S  V  T  K  P  D  K  E  K         p.1980

          .         .         .         .         .         .       g.118936
 TTTGAGAAAGACAAACCAGAAAAAGAAAGCAAAGGAAAAGAGGTCAGAGAAAATCAAAAG       c.6000
 F  E  K  D  K  P  E  K  E  S  K  G  K  E  V  R  E  N  Q  K         p.2000

                                                                    g.118939
 TAA                                                                c.6003
 X                                                                  p.2000

          .         .         .         .         .         .       g.118999
 aaagaaacaaagaattatctttgtgatcaattgtttacagcctatgaaggtaaagtatat       c.*60

          .         .         .         .         .         .       g.119059
 gtgtcaactggacttcaagaggaggtccatgccaaactgactgttttaacaaatactcat       c.*120

          .         .         .         .         .         .       g.119119
 agtcagtgcctatacaagacagtgaagtgacctctctgtcactgcaactctgtgaagcag       c.*180

          .         .         .         .         .         .       g.119179
 ggtatcaacattgacaagaggttgctgtttttattaccagctgacactgctgaggagaaa       c.*240

          .         .         .         .         .         .       g.119239
 cccaatggctacctagactatagggatagttgtgcaaagtgaacattgtaactacaccaa       c.*300

          .         .         .         .         .         .       g.119299
 acacctttagtacagtccttgcatccattctatttttaacttccatatctgccatatttt       c.*360

          .         .         .         .         .         .       g.119359
 tacaaaatttgttctagtgcatttccatggtccccaattcatagtttattcataatgcta       c.*420

          .         .         .         .         .         .       g.119419
 tgtcactatttttgtaaatgaggtttacgttgaagaaacagtatacaagaaccctgtctc       c.*480

          .         .         .         .         .         .       g.119479
 tcaaatgatcagacaaaggtgttttgccagagagataaaatttttgctcaaaaccagaaa       c.*540

          .         .         .         .         .         .       g.119539
 aagaattgtaatggctacagtttcagttacttccattttctagatggctttaattttgaa       c.*600

          .         .         .         .         .         .       g.119599
 agtattttagtctgttatgtttgtttctatctgaacagttatgtgcctgtaaagtctcct       c.*660

          .         .         .         .         .         .       g.119659
 ctaatatttaaaggattatttttatgcaaagtattctgtttcagcaagtgcaaattttat       c.*720

          .         .         .         .         .         .       g.119719
 tctaagtttcagagctctatatttaatttaggtcaaatgctttccaaaaagtaatctaat       c.*780

          .         .         .         .         .         .       g.119779
 aaatccattctagaaaaatatatctaaagtattgctttagaatagttgttccactttctg       c.*840

          .         .         .         .         .         .       g.119839
 ctgcagtattgctttgccatcttctgctctcagcaaagctgatagtctatgtcaattaaa       c.*900

          .         .         .         .         .         .       g.119899
 taccctatgttatgtaaatagttattttatcctgtggtgcatgtttgggcaaatatatat       c.*960

          .         .         .         .         .         .       g.119959
 atagcctgataaacaacttctattaaatcaaatatgtaccacagtgtatgtgtcttttgc       c.*1020

          .         .         .         .         .         .       g.120019
 aagcttccaacagggatgtatcctgtatcattcattaaacatagtttaaaggctatcact       c.*1080

          .         .         .         .         .         .       g.120079
 aatgcatgttaatattgcctatgctgctctattttactcaatccattcttcacaagtctt       c.*1140

          .         .         .         .         .         .       g.120139
 ggttaaagaatgtcacatattggtgatagaatgaattcaacctgctctgtccattatgtc       c.*1200

          .         .         .         .         .         .       g.120199
 aagcagaataatttgaagctatttacaaacacctttacttttgcacttttaattcaacat       c.*1260

          .         .         .         .         .         .       g.120259
 gagtatcatatggtatctctctagatttcaaggaaacacactggatactgcctactgaca       c.*1320

          .         .         .         .         .         .       g.120319
 aaacctattcttcatattttgctaaaaatatgtctaaaacttgtttaaatataaataatg       c.*1380

          .         .         .         .         .         .       g.120379
 taaaaatataatcaactttatttgtcagcattttgtacataagaaaattattttcaggtt       c.*1440

          .         .         .         .         .         .       g.120439
 gatgacatcacaatttattttactttatgcttttgcttttgatttttaatcacaattcca       c.*1500

          .         .         .         .         .         .       g.120499
 aacttttgaatccataagatttttcaatggataatttcctaaaataaaagttagataatg       c.*1560

          .         .         .         .         .         .       g.120559
 ggttttatggatttctttgttataatatattttctaccattccaataggagatacattgg       c.*1620

          .         .         .         .         .         .       g.120619
 tcaaacactcaaacctagatcattttctaccaactatggttgcctcaatataacctttta       c.*1680

          .         .         .         .         .         .       g.120679
 ttcatagatgtttttttttattcaacttttgtagtatttacgtatgcagactagtcttat       c.*1740

          .         .         .         .         .         .       g.120739
 ttttttaattcctgctgcactaaagctattacaaatataacatggactttgttcttttta       c.*1800

          .         .         .         .         .         .       g.120799
 gccatgaacaaagtggcaaagttgtgcaattacctaacatgatataaatttttgtttttt       c.*1860

          .         .         .         .         .         .       g.120859
 gcacaaaccaaaagtttaatgttaattctttttacaaaactatttactgtagtgtattga       c.*1920

          .         .         .         .         .         .       g.120919
 agaactgcatgcagggaattgctattgctaaaaagaatggtgagctacgtcattattgag       c.*1980

          .         .         .         .         .         .       g.120979
 ccaaaagaataaatttcattttttattgcatttcacttattggcctctggggttttttgt       c.*2040

          .         .         .         .         .         .       g.121039
 ttttgttttttgctgttggcagtttaaaatatatataattaataaaacctgtgcttgatc       c.*2100

          .         .         .         .         .         .       g.121099
 tgacatttgtatacataaaagtttacatgaattttacaacaaactagtgcatgattcacc       c.*2160

          .         .         .         .         .         .       g.121159
 aagcagtactacagaacaaaggcaaattaaaagcagctttgtgaacttttatgtgtgcaa       c.*2220

          .         .         .         .         .         .       g.121219
 aggatcaagttcacatgttccaactttcaggtttgataataatagtagtaaccacctaca       c.*2280

          .         .         .         .         .         .       g.121279
 atagctttcaatttcaattaactcccttggctataagcatctaaactcatcttctttcaa       c.*2340

          .         .         .         .         .         .       g.121339
 tataattgatgctatctcctaattacttggtggctaataaatgttacattctttgttact       c.*2400

          .         .         .         .         .         .       g.121399
 taaatgcattatataaactcctatgtatacataaggtattaatgatatagttattgagaa       c.*2460

          .         .         .         .         .         .       g.121459
 tttatattaacttttttttcaagaacccttggatttatgtgaggtcaaaaccaaactctt       c.*2520

          .         .         .         .         .         .       g.121519
 attctcagtggaaaactccagttgtaatgcatatttttaaagacaatttggatctaaata       c.*2580

          .         .         .         .         .                 g.121569
 tgtatttcataattctcccataataaattatataaggtggctaattggaa                 c.*2630

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Sodium channel, voltage-gated, type III, alpha subunit protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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