spectrin, beta, erythrocytic (SPTB) - coding DNA reference sequence

(used for variant description)

(last modified August 27, 2020)


This file was created to facilitate the description of sequence variants on transcript NM_000347.5 in the SPTB gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_016202.1, covering SPTB transcript NM_000347.5.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
           .         .         .         .         .                g.5054
       cagggatccttccatgaagactgaggcaggcggagctgctaagagcctgctgac       c.-1

          .         .         .         .         .         .       g.5114
 ATGACATCGGCCACAGAGTTTGAAAATGTGGGCAACCAGCCACCTTACAGCAGGATCAAT       c.60
 M  T  S  A  T  E  F  E  N  V  G  N  Q  P  P  Y  S  R  I  N         p.20

          .         .         .         .         .         .       g.5174
 GCCCGCTGGGACGCCCCAGACGACGAGCTGGATAATGACAACAGCTCAGCCAGGCTCTTT       c.120
 A  R  W  D  A  P  D  D  E  L  D  N  D  N  S  S  A  R  L  F         p.40

          .         .         | 02         .         .         .    g.23090
 GAGAGGTCCCGGATAAAGGCCTTGGCAG | ATGAGCGGGAAGTTGTTCAGAAAAAGACCTTC    c.180
 E  R  S  R  I  K  A  L  A  D |   E  R  E  V  V  Q  K  K  T  F      p.60

          .         .         .         .         .         .       g.23150
 ACGAAATGGGTGAACTCGCACCTGGCTCGAGTGTCCTGCCGCATCACCGATCTCTACAAG       c.240
 T  K  W  V  N  S  H  L  A  R  V  S  C  R  I  T  D  L  Y  K         p.80

          .         .         .         .         .         .       g.23210
 GACCTGCGGGATGGGCGCATGCTCATCAAGCTGCTGGAGGTGCTCTCTGGAGAGATGCTG       c.300
 D  L  R  D  G  R  M  L  I  K  L  L  E  V  L  S  G  E  M  L         p.100

  | 03       .         .         .         .         .         .    g.24428
  | CCAAAGCCCACCAAGGGGAAGATGCGCATCCACTGCCTGGAGAATGTGGACAAGGCTCTC    c.360
  | P  K  P  T  K  G  K  M  R  I  H  C  L  E  N  V  D  K  A  L      p.120

          .         .         .         .         .         .       g.24488
 CAGTTCCTCAAGGAGCAGCGTGTACACCTGGAGAACATGGGCTCCCACGACATTGTAGAT       c.420
 Q  F  L  K  E  Q  R  V  H  L  E  N  M  G  S  H  D  I  V  D         p.140

          .         .         .         .         .     | 04   .    g.25837
 GGCAACCACCGCCTGGTCCTGGGCCTCATCTGGACCATCATCCTCCGCTTCCAG | ATTCAG    c.480
 G  N  H  R  L  V  L  G  L  I  W  T  I  I  L  R  F  Q   | I  Q      p.160

          .         .         .         .         .         .       g.25897
 GACATTGTGGTCCAAACTCAGGAAGGTCGTGAAACACGCTCAGCCAAGGATGCGTTGCTG       c.540
 D  I  V  V  Q  T  Q  E  G  R  E  T  R  S  A  K  D  A  L  L         p.180

          .         .       | 05 .         .         .         .    g.26348
 TTGTGGTGTCAGATGAAGACGGCAGG | CTACCCTCATGTTAATGTCACCAACTTTACCTCC    c.600
 L  W  C  Q  M  K  T  A  G  |  Y  P  H  V  N  V  T  N  F  T  S      p.200

          .         .         .         .        | 06.         .    g.26761
 AGCTGGAAGGATGGCTTGGCCTTTAATGCCCTGATACACAAGCACCG | GCCCGACCTGATC    c.660
 S  W  K  D  G  L  A  F  N  A  L  I  H  K  H  R  |  P  D  L  I      p.220

          .         .         .         .         .         .       g.26821
 GACTTTGATAAGCTGAAGGACTCCAATGCCCGGCACAACCTGGAGCACGCATTCAATGTG       c.720
 D  F  D  K  L  K  D  S  N  A  R  H  N  L  E  H  A  F  N  V         p.240

          .         .         .         .    | 07    .         .    g.27297
 GCTGAGCGCCAGCTGGGCATCATCCCGCTCCTCGACCCCGAAG | ATGTCTTTACGGAAAAC    c.780
 A  E  R  Q  L  G  I  I  P  L  L  D  P  E  D |   V  F  T  E  N      p.260

          .         .         .         .         .         .       g.27357
 CCTGATGAGAAATCCATCATCACCTATGTGGTGGCCTTTTACCACTACTTCTCCAAGATG       c.840
 P  D  E  K  S  I  I  T  Y  V  V  A  F  Y  H  Y  F  S  K  M         p.280

          .         .         .       | 08 .         .         .    g.28238
 AAGGTGCTGGCAGTGGAGGGCAAGCGTGTCGGCAAG | GTTATTGACCATGCCATTGAGACT    c.900
 K  V  L  A  V  E  G  K  R  V  G  K   | V  I  D  H  A  I  E  T      p.300

          .         .         .         .         .         .       g.28298
 GAGAAGATGATTGAAAAGTACAGCGGGCTAGCCTCGGACCTGCTCACCTGGATCGAGCAG       c.960
 E  K  M  I  E  K  Y  S  G  L  A  S  D  L  L  T  W  I  E  Q         p.320

          .         .         .         .         .         .       g.28358
 ACCATCACTGTCCTGAACAGCCGCAAGTTTGCCAACTCGCTGACGGGCGTCCAGCAGCAG       c.1020
 T  I  T  V  L  N  S  R  K  F  A  N  S  L  T  G  V  Q  Q  Q         p.340

          .         .         .         .     | 09   .         .    g.30318
 CTGCAGGCCTTCAGCACCTACCGCACCGTGGAGAAGCCGCCCAA | GTTTCAAGAGAAGGGG    c.1080
 L  Q  A  F  S  T  Y  R  T  V  E  K  P  P  K  |  F  Q  E  K  G      p.360

          .         .         .         .         .         .       g.30378
 AATCTGGAAGTTCTACTTTTTACCATCCAGTCCCGGATGAGAGCCAACAATCAGAAAGTG       c.1140
 N  L  E  V  L  L  F  T  I  Q  S  R  M  R  A  N  N  Q  K  V         p.380

          .         .         .         .   | 10     .         .    g.31451
 TACACACCCCACGATGGGAAACTAGTGTCTGACATCAACAGG | GCCTGGGAAAGCCTGGAG    c.1200
 Y  T  P  H  D  G  K  L  V  S  D  I  N  R   | A  W  E  S  L  E      p.400

          .         .         .         .         .         .       g.31511
 GAAGCTGAGTATCGGCGGGAGCTGGCCCTGAGAAATGAGCTCATTCGGCAGGAGAAGCTA       c.1260
 E  A  E  Y  R  R  E  L  A  L  R  N  E  L  I  R  Q  E  K  L         p.420

          .         .         .         .         .         .       g.31571
 GAGCAACTGGCCCGGCGCTTTGACCGGAAGGCCGCAATGAGAGAGACCTGGCTCAGTGAA       c.1320
 E  Q  L  A  R  R  F  D  R  K  A  A  M  R  E  T  W  L  S  E         p.440

          .         .  | 11      .         .         .         .    g.32548
 AACCAGCGCCTCGTGGCCCAG | GATAACTTTGGGTATGACCTGGCAGCTGTGGAGGCCGCC    c.1380
 N  Q  R  L  V  A  Q   | D  N  F  G  Y  D  L  A  A  V  E  A  A      p.460

          .         .         .         .         .         .       g.32608
 AAGAAGAAGCATGAGGCCATCGAGACCGACACGGCTGCCTACGAGGAGCGGGTGAGAGCC       c.1440
 K  K  K  H  E  A  I  E  T  D  T  A  A  Y  E  E  R  V  R  A         p.480

          .         .         .         .         .         .       g.32668
 CTGGAGGACCTGGCTCAGGAGCTGGAGAAAGAGAACTACCATGACCAGAAGCGCATCACG       c.1500
 L  E  D  L  A  Q  E  L  E  K  E  N  Y  H  D  Q  K  R  I  T         p.500

          .         .         .         .         .         .       g.32728
 GCCCGCAAGGACAATATACTGCGCCTATGGAGCTACCTGCAGGAGCTGCTGCAGTCCCGG       c.1560
 A  R  K  D  N  I  L  R  L  W  S  Y  L  Q  E  L  L  Q  S  R         p.520

          .         .         .         .         .         .       g.32788
 CGCCAGAGGCTCGAGACCACCCTGGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAGC       c.1620
 R  Q  R  L  E  T  T  L  A  L  Q  K  L  F  Q  D  M  L  H  S         p.540

          .         .     | 12   .         .         .         .    g.33567
 ATCGACTGGATGGATGAGATCAAG | GCTCACCTCTTGTCTGCCGAGTTTGGGAAGCACTTG    c.1680
 I  D  W  M  D  E  I  K   | A  H  L  L  S  A  E  F  G  K  H  L      p.560

          .         .         .         .         .         .       g.33627
 TTGGAGGTTGAAGACCTGCTACAGAAGCACAAGTTGATGGAAGCTGACATCGCCATCCAA       c.1740
 L  E  V  E  D  L  L  Q  K  H  K  L  M  E  A  D  I  A  I  Q         p.580

          .         .         .         .         .      | 13  .    g.34286
 GGGGACAAAGTGAAGGCCATCACCGCAGCCACCCTGAAGTTCACCGAGGGGAAAG | GGTAC    c.1800
 G  D  K  V  K  A  I  T  A  A  T  L  K  F  T  E  G  K  G |   Y      p.600

          .         .         .         .         .         .       g.34346
 CAGCCTTGTGACCCCCAGGTCATCCAGGACCGCATCAGCCACTTGGAGCAGTGCTTTGAG       c.1860
 Q  P  C  D  P  Q  V  I  Q  D  R  I  S  H  L  E  Q  C  F  E         p.620

          .         .         .         .         .         .       g.34406
 GAGCTGAGCAACATGGCAGCTGGGCGGAAGGCCCAACTGGAGCAGTCCAAACGACTCTGG       c.1920
 E  L  S  N  M  A  A  G  R  K  A  Q  L  E  Q  S  K  R  L  W         p.640

          .         .         .         .         .         .       g.34466
 AAGTTCTTCTGGGAGATGGATGAGGCTGAGAGCTGGATCAAGGAGAAGGAGCAGATCTAT       c.1980
 K  F  F  W  E  M  D  E  A  E  S  W  I  K  E  K  E  Q  I  Y         p.660

          .         .         .         .         .         .       g.34526
 TCTTCCCTGGACTATGGCAAAGACCTGACCAGTGTGCTCATCTTACAGCGCAAGCACAAG       c.2040
 S  S  L  D  Y  G  K  D  L  T  S  V  L  I  L  Q  R  K  H  K         p.680

          .         .         .         .         .         .       g.34586
 GCCTTTGAGGATGAGCTCCGTGGGCTGGATGCTCACCTGGAGCAGATCTTCCAGGAGGCT       c.2100
 A  F  E  D  E  L  R  G  L  D  A  H  L  E  Q  I  F  Q  E  A         p.700

          .         .         .         .         .         .       g.34646
 CATGGCATGGTTGCGCGCAAGCAGTTTGGGCACCCGCAGATCGAGGCCCGCATAAAGGAG       c.2160
 H  G  M  V  A  R  K  Q  F  G  H  P  Q  I  E  A  R  I  K  E         p.720

          .         .         .         .         .         .       g.34706
 GTGTCGGCACAGTGGGACCAGCTGAAGGACCTGGCTGCCTTCTGCAAGAAGAACCTCCAG       c.2220
 V  S  A  Q  W  D  Q  L  K  D  L  A  A  F  C  K  K  N  L  Q         p.740

          .         .         .         .         .         .       g.34766
 GATGCTGAGAACTTTTTCCAGTTCCAGGGCGATGCGGATGACCTGAAGGCTTGGCTGCAA       c.2280
 D  A  E  N  F  F  Q  F  Q  G  D  A  D  D  L  K  A  W  L  Q         p.760

          .         .         .         .         .         .       g.34826
 GACGCCCACCGGCTGCTCTCTGGTGAAGATGTGGGGCAGGACGAAGGGGCCACGCGGGCC       c.2340
 D  A  H  R  L  L  S  G  E  D  V  G  Q  D  E  G  A  T  R  A         p.780

          .         .         .         .         .         .       g.34886
 CTGGGGAAAAAGCACAAGGACTTCCTGGAGGAGCTGGAGGAGAGCCGTGGGGTGATGGAG       c.2400
 L  G  K  K  H  K  D  F  L  E  E  L  E  E  S  R  G  V  M  E         p.800

          .         .         .         .         .         .       g.34946
 CACCTGGAGCAGCAGGCCCAGGGATTCCCCGAAGAGTTTCGGGATTCCCCAGATGTGACC       c.2460
 H  L  E  Q  Q  A  Q  G  F  P  E  E  F  R  D  S  P  D  V  T         p.820

          .         .         .         .         .         .       g.35006
 CATCGGCTGCAGGCCCTGCGGGAGCTCTACCAACAGGTGGTGGCCCAGGCGGACCTGCGT       c.2520
 H  R  L  Q  A  L  R  E  L  Y  Q  Q  V  V  A  Q  A  D  L  R         p.840

          .         .         .         .         .         .       g.35066
 CAGCAGAGGCTGCAGGAAGCCCTGGACCTGTACACGGTGTTCGGGGAGACAGACGCCTGT       c.2580
 Q  Q  R  L  Q  E  A  L  D  L  Y  T  V  F  G  E  T  D  A  C         p.860

          .         .         .         .         .         .       g.35126
 GAGCTGTGGATGGGAGAGAAGGAGAAGTGGCTGGCCGAGATGGAAATGCCAGACACCCTG       c.2640
 E  L  W  M  G  E  K  E  K  W  L  A  E  M  E  M  P  D  T  L         p.880

          .         .       | 14 .         .         .         .    g.36326
 GAGGACCTGGAGGTCGTGCAGCACAG | GTTCGACATCCTGGACCAGGAGATGAAGACCTTG    c.2700
 E  D  L  E  V  V  Q  H  R  |  F  D  I  L  D  Q  E  M  K  T  L      p.900

          .         .         .         .         .         .       g.36386
 ATGACTCAGATTGATGGTGTGAACCTCGCTGCCAACAGCTTGGTAGAGAGTGGCCACCCA       c.2760
 M  T  Q  I  D  G  V  N  L  A  A  N  S  L  V  E  S  G  H  P         p.920

          .         .         .         .     | 15   .         .    g.41004
 CGCAGCAGGGAGGTGAAGCAGTACCAGGACCATCTGAACACCAG | GTGGCAGGCATTTCAG    c.2820
 R  S  R  E  V  K  Q  Y  Q  D  H  L  N  T  R  |  W  Q  A  F  Q      p.940

          .         .         .         .         .         .       g.41064
 ACCCTGGTGTCGGAGCGGCGGGAGGCTGTGGACTCAGCCCTCCGAGTGCACAACTACTGC       c.2880
 T  L  V  S  E  R  R  E  A  V  D  S  A  L  R  V  H  N  Y  C         p.960

          .         .         .         .         .         .       g.41124
 GTAGATTGCGAGGAGACCAGCAAGTGGATCACGGACAAGACAAAGGTAGTGGAGTCCACA       c.2940
 V  D  C  E  E  T  S  K  W  I  T  D  K  T  K  V  V  E  S  T         p.980

          .         .         .         .         .         .       g.41184
 AAAGACCTGGGGCGGGACCTGGCAGGTATCATCGCCATCCAGAGGAAGTTGTCAGGGCTG       c.3000
 K  D  L  G  R  D  L  A  G  I  I  A  I  Q  R  K  L  S  G  L         p.1000

          .         .         .         .         .         .       g.41244
 GAGCGTGACGTGGCCGCCATCCAGGCCCGTGTGGATGCCCTGGAGCGTGAGTCCCAGCAG       c.3060
 E  R  D  V  A  A  I  Q  A  R  V  D  A  L  E  R  E  S  Q  Q         p.1020

          .         .         .         .         .         .       g.41304
 CTGATGGACTCGCACCCTGAGCAGAAGGAGGATATTGGTCAGCGGCAAAAACACTTGGAG       c.3120
 L  M  D  S  H  P  E  Q  K  E  D  I  G  Q  R  Q  K  H  L  E         p.1040

          .         .         .         .         .         .       g.41364
 GAGCTGTGGCAGGGCCTGCAGCAATCCCTGCAGGGCCAGGAGGACTTGCTGGGGGAAGTC       c.3180
 E  L  W  Q  G  L  Q  Q  S  L  Q  G  Q  E  D  L  L  G  E  V         p.1060

          .         .         .         .         .         .       g.41424
 AGCCAGCTGCAGGCCTTCCTGCAGGATCTGGATGACTTCCAGGCCTGGCTCTCCATCACC       c.3240
 S  Q  L  Q  A  F  L  Q  D  L  D  D  F  Q  A  W  L  S  I  T         p.1080

          .         .         .         .         .         .       g.41484
 CAGAAGGCTGTGGCCTCTGAGGACATGCCCGAATCCCTCCCAGAGGCTGAGCAGCTCCTG       c.3300
 Q  K  A  V  A  S  E  D  M  P  E  S  L  P  E  A  E  Q  L  L         p.1100

          .         .         .         .         .         .       g.41544
 CAGCAGCATGCAGGTATCAAGGATGAGATTGACGGGCACCAAGACAGCTACCAGCGTGTT       c.3360
 Q  Q  H  A  G  I  K  D  E  I  D  G  H  Q  D  S  Y  Q  R  V         p.1120

          .         .         .         .         .         .       g.41604
 AAGGAGTCTGGGGAGAAAGTGATCCAAGGCCAGACGGACCCAGAGTATCTGCTTCTGGGC       c.3420
 K  E  S  G  E  K  V  I  Q  G  Q  T  D  P  E  Y  L  L  L  G         p.1140

          .         .         .         .         .         .       g.41664
 CAGCGGCTGGAGGGCCTGGATACTGGCTGGAATGCCCTGGGCAGGATGTGGGAGAGCCGC       c.3480
 Q  R  L  E  G  L  D  T  G  W  N  A  L  G  R  M  W  E  S  R         p.1160

          .         .         .         .         .         .       g.41724
 AGCCACACCCTCGCTCAGTGCCTTGGCTTCCAGGAGTTCCAGAAAGATGCCAAGCAGGCT       c.3540
 S  H  T  L  A  Q  C  L  G  F  Q  E  F  Q  K  D  A  K  Q  A         p.1180

          .         .  | 16      .         .         .         .    g.42236
 GAAGCCATCCTCAGCAACCAG | GAATACACTCTGGCTCACTTGGAGCCCCCAGACTCCCTG    c.3600
 E  A  I  L  S  N  Q   | E  Y  T  L  A  H  L  E  P  P  D  S  L      p.1200

          .         .         .         .         .         .       g.42296
 GAAGCTGCAGAGGCTGGGATCCGGAAGTTTGAGGATTTCTTGGGGTCTATGGAGAACAAC       c.3660
 E  A  A  E  A  G  I  R  K  F  E  D  F  L  G  S  M  E  N  N         p.1220

          .         .         .         .         .         .       g.42356
 CGGGATAAGGTCTTGAGTCCTGTGGACTCTGGAAACAAGCTGGTAGCTGAGGGAAACCTA       c.3720
 R  D  K  V  L  S  P  V  D  S  G  N  K  L  V  A  E  G  N  L         p.1240

          .         .         .         .     | 17   .         .    g.42537
 TACTCAGACAAGATCAAGGAGAAGGTGCAGCTGATTGAGGACAG | GCACAGGAAGAACAAC    c.3780
 Y  S  D  K  I  K  E  K  V  Q  L  I  E  D  R  |  H  R  K  N  N      p.1260

          .         .         .         .         .         .       g.42597
 GAGAAGGCCCAGGAGGCCTCTGTCCTACTGAGAGACAACCTGGAGCTACAGAACTTCCTC       c.3840
 E  K  A  Q  E  A  S  V  L  L  R  D  N  L  E  L  Q  N  F  L         p.1280

          .      | 18  .         .         .         .         .    g.43800
 CAGAACTGCCAGGAG | CTCACTCTCTGGATCAACGACAAGCTGCTGACATCTCAGGATGTC    c.3900
 Q  N  C  Q  E   | L  T  L  W  I  N  D  K  L  L  T  S  Q  D  V      p.1300

          .         .         .         .         .         .       g.43860
 TCCTATGATGAAGCACGAAACCTTCACAATAAATGGCTAAAGCACCAGGCGTTTGTGGCA       c.3960
 S  Y  D  E  A  R  N  L  H  N  K  W  L  K  H  Q  A  F  V  A         p.1320

          .         .         .         .   | 19     .         .    g.45613
 GAGCTGGCTTCCCATGAAGGGTGGCTAGAGAACATCGATGCG | GAAGGAAAGCAGCTGATG    c.4020
 E  L  A  S  H  E  G  W  L  E  N  I  D  A   | E  G  K  Q  L  M      p.1340

          .         .         .         .         .         .       g.45673
 GATGAGAAGCCCCAGTTTACAGCCCTGGTGTCCCAAAAGCTGGAAGCCCTGCACCGGCTC       c.4080
 D  E  K  P  Q  F  T  A  L  V  S  Q  K  L  E  A  L  H  R  L         p.1360

          .         .         .         .         .         .       g.45733
 TGGGACGAGCTGCAGGCCACCACAAAGGAGAAGACCCAGCACCTCTCGGCTGCCAGGAGC       c.4140
 W  D  E  L  Q  A  T  T  K  E  K  T  Q  H  L  S  A  A  R  S         p.1380

          .         .         .         .         .         .       g.45793
 TCCGACCTGCGCTTGCAGACCCATGCTGACCTCAACAAGTGGATCAGCGCCATGGAGGAC       c.4200
 S  D  L  R  L  Q  T  H  A  D  L  N  K  W  I  S  A  M  E  D         p.1400

          .         .         .         .         .         .       g.45853
 CAGCTGCGGTCAGACGACCCGGGCAAGGACCTGACCAGTGTCAATCGGATGTTGGCTAAG       c.4260
 Q  L  R  S  D  D  P  G  K  D  L  T  S  V  N  R  M  L  A  K         p.1420

        | 20 .         .         .         .         .         .    g.48271
 CTGAAG | CGAGTGGAGGACCAAGTGAATGTGCGAAAAGAGGAGCTGGGGGAGCTGTTTGCC    c.4320
 L  K   | R  V  E  D  Q  V  N  V  R  K  E  E  L  G  E  L  F  A      p.1440

          .         .         .         .         .         .       g.48331
 CAGGTGCCTTCAATGGGAGAGGAGGGAGGAGATGCAGACTTGAGCATCGAGAAGCGGTTC       c.4380
 Q  V  P  S  M  G  E  E  G  G  D  A  D  L  S  I  E  K  R  F         p.1460

          .         .         .         .         .         .       g.48391
 CTGGACCTCCTGGAACCCCTAGGAAGGAGGAAGAAGCAGCTGGAATCATCCAGAGCCAAG       c.4440
 L  D  L  L  E  P  L  G  R  R  K  K  Q  L  E  S  S  R  A  K         p.1480

          .         .         .    | 21    .         .         .    g.48929
 CTGCAGATCAGCCGGGACTTAGAGGATGAGACG | CTTTGGGTGGAGGAGAGGCTGCCTCTG    c.4500
 L  Q  I  S  R  D  L  E  D  E  T   | L  W  V  E  E  R  L  P  L      p.1500

          .         .         .         .         .         .       g.48989
 GCCCAGTCAGCCGACTATGGCACTAATCTGCAAACTGTGCAACTGTTCATGAAGAAGAAC       c.4560
 A  Q  S  A  D  Y  G  T  N  L  Q  T  V  Q  L  F  M  K  K  N         p.1520

     | 22    .         .         .         .         .         .    g.52802
 CAG | ACACTGCAGAATGAGATTCTGGGCCATACGCCGCGGGTTGAGGATGTGCTGCAGAGA    c.4620
 Q   | T  L  Q  N  E  I  L  G  H  T  P  R  V  E  D  V  L  Q  R      p.1540

          .         .         .         .         .         .       g.52862
 GGGCAGCAGCTGGTGGAGGCGGCGGAGATCGACTGCCAGGACCTTGAGGAGCGCCTGGGG       c.4680
 G  Q  Q  L  V  E  A  A  E  I  D  C  Q  D  L  E  E  R  L  G         p.1560

          .         .         .         .         .         .       g.52922
 CACCTGCAGAGCTCCTGGGACAGGCTGCGGGAGGCAGCGGCCGGGAGGCTGCAGCGACTG       c.4740
 H  L  Q  S  S  W  D  R  L  R  E  A  A  A  G  R  L  Q  R  L         p.1580

          .         .         .         .         .         .       g.52982
 AGGGACGCCAACGAGGCACAGCAGTACTACCTGGATGCAGACGAGGCTGAGGCCTGGATT       c.4800
 R  D  A  N  E  A  Q  Q  Y  Y  L  D  A  D  E  A  E  A  W  I         p.1600

          .         .         .         .   | 23     .         .    g.53639
 GGCGAGCAGGAGCTCTACGTCATCTCCGATGAGATCCCCAAG | GATGAAGAGGGCGCCATT    c.4860
 G  E  Q  E  L  Y  V  I  S  D  E  I  P  K   | D  E  E  G  A  I      p.1620

          .         .         .         .         .         .       g.53699
 GTGATGCTGAAGCGACATTTGCGGCAGCAGCGTGCGGTGGAGGACTACGGCCGGAACATC       c.4920
 V  M  L  K  R  H  L  R  Q  Q  R  A  V  E  D  Y  G  R  N  I         p.1640

          .         .         .         .         .    | 24    .    g.54731
 AAGCAGCTGGCCAGCCGGGCCCAGGGCCTGCTGTCTGCAGGCCACCCTGAGGG | GGAACAG    c.4980
 K  Q  L  A  S  R  A  Q  G  L  L  S  A  G  H  P  E  G  |  E  Q      p.1660

          .         .         .         .         .         .       g.54791
 ATCATCAGACTTCAGGGGCAAGTGGACAAGCACTACGCAGGGCTGAAGGACGTGGCGGAA       c.5040
 I  I  R  L  Q  G  Q  V  D  K  H  Y  A  G  L  K  D  V  A  E         p.1680

          .         .         .         .         .         .       g.54851
 GAGCGCAAGCGCAAGCTGGAGAACATGTACCACCTGTTCCAGCTCAAGCGGGAGACCGAC       c.5100
 E  R  K  R  K  L  E  N  M  Y  H  L  F  Q  L  K  R  E  T  D         p.1700

          .         .         .         .         .         .       g.54911
 GACCTGGAGCAGTGGATTTCAGAAAAGGAGCTAGTGGCCTCTTCCCCGGAAATGGGGCAA       c.5160
 D  L  E  Q  W  I  S  E  K  E  L  V  A  S  S  P  E  M  G  Q         p.1720

          .         | 25         .         .         .         .    g.55236
 GACTTTGACCACGTGACT | CTTCTGCGGGACAAGTTCCGGGACTTTGCCCGGGAGACCGGG    c.5220
 D  F  D  H  V  T   | L  L  R  D  K  F  R  D  F  A  R  E  T  G      p.1740

          .         .         .         .         .         .       g.55296
 GCGATTGGGCAGGAGCGGGTGGACAATGTGAATGCCTTCATCGAGCGACTCATCGACGCG       c.5280
 A  I  G  Q  E  R  V  D  N  V  N  A  F  I  E  R  L  I  D  A         p.1760

          .         .         .         .         .         .       g.55356
 GGCCACAGCGAGGCGGCCACCATCGCCGAGTGGAAGGACGGGCTGAACGAGATGTGGGCA       c.5340
 G  H  S  E  A  A  T  I  A  E  W  K  D  G  L  N  E  M  W  A         p.1780

          .         .         .         .         .         .       g.55416
 GACCTCCTGGAGCTCATTGACACGCGCATGCAGCTGCTGGCCGCCTCCTATGACCTGCAC       c.5400
 D  L  L  E  L  I  D  T  R  M  Q  L  L  A  A  S  Y  D  L  H         p.1800

          .         .         .         .         .         .       g.55476
 CGCTACTTCTACACGGGTGCCGAGATCCTGGGCCTCATCGACGAGAAGCACCGCGAGCTG       c.5460
 R  Y  F  Y  T  G  A  E  I  L  G  L  I  D  E  K  H  R  E  L         p.1820

          .         .         .         .         .         .       g.55536
 CCCGAGGACGTGGGGCTGGACGCCAGCACGGCCGAGTCCTTCCACCGGGTGCACACAGCC       c.5520
 P  E  D  V  G  L  D  A  S  T  A  E  S  F  H  R  V  H  T  A         p.1840

          .         .         .    | 26    .         .         .    g.57046
 TTCGAGCGGGAGCTCCACCTGCTGGGTGTCCAG | GTGCAGCAGTTCCAGGACGTGGCCACC    c.5580
 F  E  R  E  L  H  L  L  G  V  Q   | V  Q  Q  F  Q  D  V  A  T      p.1860

          .         .         .         .         .         .       g.57106
 CGTCTGCAGACAGCATATGCTGGGGAGAAGGCAGAGGCCATCCAGAACAAGGAGCAGGAG       c.5640
 R  L  Q  T  A  Y  A  G  E  K  A  E  A  I  Q  N  K  E  Q  E         p.1880

          .         .         .         .         .         .       g.57166
 GTGTCTGCCGCGTGGCAGGCGCTGCTCGATGCCTGTGCCGGGCGCCGGACCCAGCTAGTG       c.5700
 V  S  A  A  W  Q  A  L  L  D  A  C  A  G  R  R  T  Q  L  V         p.1900

          .         .         .         .         .         .       g.57226
 GACACGGCGGATAAATTCCGCTTCTTCAGCATGGCCCGTGACCTCCTCTCCTGGATGGAG       c.5760
 D  T  A  D  K  F  R  F  F  S  M  A  R  D  L  L  S  W  M  E         p.1920

          .         .         .         | 27         .         .    g.58442
 AGCATCATCCGGCAGATCGAGACCCAGGAGAGGCCCAG | GGATGTCTCCTCTGTGGAACTG    c.5820
 S  I  I  R  Q  I  E  T  Q  E  R  P  R  |  D  V  S  S  V  E  L      p.1940

          .         .         .         .         .         .       g.58502
 CTCATGAAGTATCACCAGGGCATCAATGCAGAGATTGAAACCCGGAGCAAGAACTTCAGT       c.5880
 L  M  K  Y  H  Q  G  I  N  A  E  I  E  T  R  S  K  N  F  S         p.1960

          .         .         .         .         .        | 28.    g.59033
 GCCTGCCTGGAGCTTGGCGAGTCCCTGCTGCAGCGGCAGCACCAGGCCTCAGAGGAG | ATC    c.5940
 A  C  L  E  L  G  E  S  L  L  Q  R  Q  H  Q  A  S  E  E   | I      p.1980

          .         .         .         .         .         .       g.59093
 CGCGAGAAACTGCAGCAGGTGATGTCCAGGAGGAAAGAGATGAATGAGAAGTGGGAAGCC       c.6000
 R  E  K  L  Q  Q  V  M  S  R  R  K  E  M  N  E  K  W  E  A         p.2000

          .         .   | 29     .         .         .         .    g.60327
 CGCTGGGAGCGGCTCCGCATGT | TGCTGGAGGTGTGCCAGTTCTCGAGGGATGCCTCTGTG    c.6060
 R  W  E  R  L  R  M  L |   L  E  V  C  Q  F  S  R  D  A  S  V      p.2020

          .         .         .         .         .         .       g.60387
 GCTGAGGCGTGGCTGATTGCCCAGGAGCCCTACCTGGCCAGCGGGGACTTTGGACACACA       c.6120
 A  E  A  W  L  I  A  Q  E  P  Y  L  A  S  G  D  F  G  H  T         p.2040

          .         .         .         .         .         .       g.60447
 GTGGACAGTGTGGAGAAGCTCATCAAGAGGCATGAGGCTTTTGAGAAGTCCACGGCCAGC       c.6180
 V  D  S  V  E  K  L  I  K  R  H  E  A  F  E  K  S  T  A  S         p.2060

          .         .         .          | 30        .         .    g.60817
 TGGGCAGAGCGCTTTGCTGCCCTGGAGAAGCCCACCACG | CTTGAGCTGAAAGAACGCCAG    c.6240
 W  A  E  R  F  A  A  L  E  K  P  T  T   | L  E  L  K  E  R  Q      p.2080

          .         .          | 31        .         .         .    g.61378
 ATTGCAGAGAGACCCGCAGAGGAGACTGG | GCCTCAAGAGGAGGAAGGCGAGACAGCAGGG    c.6300
 I  A  E  R  P  A  E  E  T  G  |  P  Q  E  E  E  G  E  T  A  G      p.2100

          .         .         .         .         .         .       g.61438
 GAGGCTCCAGTTTCCCACCATGCGGCCACCGAGAGAACGTCCCCGGTCAGTCTCTGGTCT       c.6360
 E  A  P  V  S  H  H  A  A  T  E  R  T  S  P  V  S  L  W  S         p.2120

          .         .         .         .         .                 g.61492
 CGTTTGTCTAGTTCCTGGGAGTCACTGCAGCCAGAGCCCTCTCACCCCTACTAG             c.6414
 R  L  S  S  S  W  E  S  L  Q  P  E  P  S  H  P  Y  X               p.2137

          .         .         .         .         .         .       g.61552
 gctcagcccaggtggaggcgagatgagctggcgcagccccgccctccatcctccccacat       c.*60

          .         .         .         .         .         .       g.61612
 ccctgcagccacctcccagcagagcaggctacgtcctcactgaggtgttcttcatgagag       c.*120

          .         .         .         .         .         .       g.61672
 tactagcctcctccactcctccccacagcgcagaggaaacaggccagcccagtgacatga       c.*180

          .         .         .         .         .         .       g.61732
 cgttattagttttgttttacctaatgtaataaattttattgtataaatatatcaccattt       c.*240

          .                                                         g.61750
 acatgaggggaaacacta                                                 c.*258

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Spectrin, beta, erythrocytic protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

Powered by LOVD v.3.0 Build 24
©2004-2020 Leiden University Medical Center