tet methylcytosine dioxygenase 2 (TET2) - coding DNA reference sequence

(used for variant description)

(last modified December 17, 2021)


This file was created to facilitate the description of sequence variants on transcript NM_001127208.2 in the TET2 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NC_000004.11, covering TET2 transcript NM_001127208.2.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                                                    g.5817
                                                      ggcagtg       c.-481

 .         .         .         .         .         .                g.5877
 gcagcggcgagagcttgggcggccgccgccgcctcctcgcgagcgccgcgcgcccgggtc       c.-421

 .         .         .         .         .         .                g.5937
 ccgctcgcatgcaagtcacgtccgccccctcggcgcggccgccccgagacgccggccccg       c.-361

 .         .         .         .         .         .                g.5997
 ctgagtgatgagaacagacgtcaaactgccttatgaatattgatgcggaggctaggctgc       c.-301

 .         .         .         .         .         .                g.6057
 tttcgtagagaagcagaaggaagcaagatggctgccctttaggatttgttagaaaggaga       c.-241

 .         .         .         .         .        | 02.             g.49497
 cccgactgcaactgctggattgctgcaaggctgagggacgagaacgag | gctggcaaacat    c.-181

 .         .         .         .         .         .                g.49557
 tcagcagcacaccctctcaagattgtttacttgcctttgctcctgttgagttacaacgct       c.-121

 .         .         .         .         .         .                g.49617
 tggaagcaggagatgggctcagcagcagccaataggacatgatccaggaagagcagtaag       c.-61

 .         .    | 03    .         .         .         .             g.93068
 ggactgagctgctg | aattcaactagagggcagccttgtggatggccccgaagcaagcctg    c.-1

          .         .         .         .         .         .       g.93128
 ATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCA       c.60
 M  E  Q  D  R  T  N  H  V  E  G  N  R  L  S  P  F  L  I  P         p.20

          .         .         .         .         .         .       g.93188
 TCACCTCCCATTTGCCAGACAGAACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACTG       c.120
 S  P  P  I  C  Q  T  E  P  L  A  T  K  L  Q  N  G  S  P  L         p.40

          .         .         .         .         .         .       g.93248
 CCTGAGAGAGCTCATCCAGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAAAAGTTAT       c.180
 P  E  R  A  H  P  E  V  N  G  D  T  K  W  H  S  F  K  S  Y         p.60

          .         .         .         .         .         .       g.93308
 TATGGAATACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAGTCCTGACTTTACACAA       c.240
 Y  G  I  P  C  M  K  G  S  Q  N  S  R  V  S  P  D  F  T  Q         p.80

          .         .         .         .         .         .       g.93368
 GAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATGGAGGAATAAAACGCACAGTTAGTGAA       c.300
 E  S  R  G  Y  S  K  C  L  Q  N  G  G  I  K  R  T  V  S  E         p.100

          .         .         .         .         .         .       g.93428
 CCTTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAGACCAAAAGGCTAATGGA       c.360
 P  S  L  S  G  L  L  Q  I  K  K  L  K  Q  D  Q  K  A  N  G         p.120

          .         .         .         .         .         .       g.93488
 GAAAGACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAAT       c.420
 E  R  R  N  F  G  V  S  Q  E  R  N  P  G  E  S  S  Q  P  N         p.140

          .         .         .         .         .         .       g.93548
 GTCTCCGATTTGAGTGATAAGAAAGAATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTT       c.480
 V  S  D  L  S  D  K  K  E  S  V  S  S  V  A  Q  E  N  A  V         p.160

          .         .         .         .         .         .       g.93608
 AAAGATTTCACCAGTTTTTCAACACATAACTGCAGTGGGCCTGAAAATCCAGAGCTTCAG       c.540
 K  D  F  T  S  F  S  T  H  N  C  S  G  P  E  N  P  E  L  Q         p.180

          .         .         .         .         .         .       g.93668
 ATTCTGAATGAGCAGGAGGGGAAAAGTGCTAATTACCATGACAAGAACATTGTATTACTT       c.600
 I  L  N  E  Q  E  G  K  S  A  N  Y  H  D  K  N  I  V  L  L         p.200

          .         .         .         .         .         .       g.93728
 AAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCTTCCGTGGAACAC       c.660
 K  N  K  A  V  L  M  P  N  G  A  T  V  S  A  S  S  V  E  H         p.220

          .         .         .         .         .         .       g.93788
 ACACATGGTGAACTCCTGGAAAAAACACTGTCTCAATATTATCCAGATTGTGTTTCCATT       c.720
 T  H  G  E  L  L  E  K  T  L  S  Q  Y  Y  P  D  C  V  S  I         p.240

          .         .         .         .         .         .       g.93848
 GCGGTGCAGAAAACCACATCTCACATAAATGCCATTAACAGTCAGGCTACTAATGAGTTG       c.780
 A  V  Q  K  T  T  S  H  I  N  A  I  N  S  Q  A  T  N  E  L         p.260

          .         .         .         .         .         .       g.93908
 TCCTGTGAGATCACTCACCCATCGCATACCTCAGGGCAGATCAATTCCGCACAGACCTCT       c.840
 S  C  E  I  T  H  P  S  H  T  S  G  Q  I  N  S  A  Q  T  S         p.280

          .         .         .         .         .         .       g.93968
 AACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCTGATGAT       c.900
 N  S  E  L  P  P  K  P  A  A  V  V  S  E  A  C  D  A  D  D         p.300

          .         .         .         .         .         .       g.94028
 GCTGATAATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTTCCTTTCAGAAACCAGAA       c.960
 A  D  N  A  S  K  L  A  A  M  L  N  T  C  S  F  Q  K  P  E         p.320

          .         .         .         .         .         .       g.94088
 CAACTACAACAACAAAAATCAGTTTTTGAGATATGCCCATCTCCTGCAGAAAATAACATC       c.1020
 Q  L  Q  Q  Q  K  S  V  F  E  I  C  P  S  P  A  E  N  N  I         p.340

          .         .         .         .         .         .       g.94148
 CAGGGAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTG       c.1080
 Q  G  T  T  K  L  A  S  G  E  E  F  C  S  G  S  S  S  N  L         p.360

          .         .         .         .         .         .       g.94208
 CAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACAAAATGAAATGAATGGTGCTTAC       c.1140
 Q  A  P  G  G  S  S  E  R  Y  L  K  Q  N  E  M  N  G  A  Y         p.380

          .         .         .         .         .         .       g.94268
 TTCAAGCAAAGCTCAGTGTTCACTAAGGATTCCTTTTCTGCCACTACCACACCACCACCA       c.1200
 F  K  Q  S  S  V  F  T  K  D  S  F  S  A  T  T  T  P  P  P         p.400

          .         .         .         .         .         .       g.94328
 CCATCACAATTGCTTCTTTCTCCCCCTCCTCCTCTTCCACAGGTTCCTCAGCTTCCTTCA       c.1260
 P  S  Q  L  L  L  S  P  P  P  P  L  P  Q  V  P  Q  L  P  S         p.420

          .         .         .         .         .         .       g.94388
 GAAGGAAAAAGCACTCTGAATGGTGGAGTTTTAGAAGAACACCACCACTACCCCAACCAA       c.1320
 E  G  K  S  T  L  N  G  G  V  L  E  E  H  H  H  Y  P  N  Q         p.440

          .         .         .         .         .         .       g.94448
 AGTAACACAACACTTTTAAGGGAAGTGAAAATAGAGGGTAAACCTGAGGCACCACCTTCC       c.1380
 S  N  T  T  L  L  R  E  V  K  I  E  G  K  P  E  A  P  P  S         p.460

          .         .         .         .         .         .       g.94508
 CAGAGTCCTAATCCATCTACACATGTATGCAGCCCTTCTCCGATGCTTTCTGAAAGGCCT       c.1440
 Q  S  P  N  P  S  T  H  V  C  S  P  S  P  M  L  S  E  R  P         p.480

          .         .         .         .         .         .       g.94568
 CAGAATAATTGTGTGAACAGGAATGACATACAGACTGCAGGGACAATGACTGTTCCATTG       c.1500
 Q  N  N  C  V  N  R  N  D  I  Q  T  A  G  T  M  T  V  P  L         p.500

          .         .         .         .         .         .       g.94628
 TGTTCTGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGT       c.1560
 C  S  E  K  T  R  P  M  S  E  H  L  K  H  N  P  P  I  F  G         p.520

          .         .         .         .         .         .       g.94688
 AGCAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAACAAAGAGCAAGAGATT       c.1620
 S  S  G  E  L  Q  D  N  C  Q  Q  L  M  R  N  K  E  Q  E  I         p.540

          .         .         .         .         .         .       g.94748
 CTGAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTGCCCCCAACACAGCACTATCTG       c.1680
 L  K  G  R  D  K  E  Q  T  R  D  L  V  P  P  T  Q  H  Y  L         p.560

          .         .         .         .         .         .       g.94808
 AAACCAGGATGGATTGAATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCATCTAAAA       c.1740
 K  P  G  W  I  E  L  K  A  P  R  F  H  Q  A  E  S  H  L  K         p.580

          .         .         .         .         .         .       g.94868
 CGTAATGAGGCATCACTGCCATCAATTCTTCAGTATCAACCCAATCTCTCCAATCAAATG       c.1800
 R  N  E  A  S  L  P  S  I  L  Q  Y  Q  P  N  L  S  N  Q  M         p.600

          .         .         .         .         .         .       g.94928
 ACCTCCAAACAATACACTGGAAATTCCAACATGCCTGGGGGGCTCCCAAGGCAAGCTTAC       c.1860
 T  S  K  Q  Y  T  G  N  S  N  M  P  G  G  L  P  R  Q  A  Y         p.620

          .         .         .         .         .         .       g.94988
 ACCCAGAAAACAACACAGCTGGAGCACAAGTCACAAATGTACCAAGTTGAAATGAATCAA       c.1920
 T  Q  K  T  T  Q  L  E  H  K  S  Q  M  Y  Q  V  E  M  N  Q         p.640

          .         .         .         .         .         .       g.95048
 GGGCAGTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAAAAACCCTCACACCAGGTG       c.1980
 G  Q  S  Q  G  T  V  D  Q  H  L  Q  F  Q  K  P  S  H  Q  V         p.660

          .         .         .         .         .         .       g.95108
 CACTTCTCCAAAACAGACCATTTACCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA       c.2040
 H  F  S  K  T  D  H  L  P  K  A  H  V  Q  S  L  C  G  T  R         p.680

          .         .         .         .         .         .       g.95168
 TTTCATTTTCAACAAAGAGCAGATTCCCAAACTGAAAAACTTATGTCCCCAGTGTTGAAA       c.2100
 F  H  F  Q  Q  R  A  D  S  Q  T  E  K  L  M  S  P  V  L  K         p.700

          .         .         .         .         .         .       g.95228
 CAGCACTTGAATCAACAGGCTTCAGAGACTGAGCCATTTTCAAACTCACACCTTTTGCAA       c.2160
 Q  H  L  N  Q  Q  A  S  E  T  E  P  F  S  N  S  H  L  L  Q         p.720

          .         .         .         .         .         .       g.95288
 CATAAGCCTCATAAACAGGCAGCACAAACACAACCATCCCAGAGTTCACATCTCCCTCAA       c.2220
 H  K  P  H  K  Q  A  A  Q  T  Q  P  S  Q  S  S  H  L  P  Q         p.740

          .         .         .         .         .         .       g.95348
 AACCAGCAACAGCAGCAAAAATTACAAATAAAGAATAAAGAGGAAATACTCCAGACTTTT       c.2280
 N  Q  Q  Q  Q  Q  K  L  Q  I  K  N  K  E  E  I  L  Q  T  F         p.760

          .         .         .         .         .         .       g.95408
 CCTCACCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACTAAA       c.2340
 P  H  P  Q  S  N  N  D  Q  Q  R  E  G  S  F  F  G  Q  T  K         p.780

          .         .         .         .         .         .       g.95468
 GTGGAAGAATGTTTTCATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTCAT       c.2400
 V  E  E  C  F  H  G  E  N  Q  Y  S  K  S  S  E  F  E  T  H         p.800

          .         .         .         .         .         .       g.95528
 AATGTCCAAATGGGACTGGAGGAAGTACAGAATATAAATCGTAGAAATTCCCCTTATAGT       c.2460
 N  V  Q  M  G  L  E  E  V  Q  N  I  N  R  R  N  S  P  Y  S         p.820

          .         .         .         .         .         .       g.95588
 CAGACCATGAAATCAAGTGCATGCAAAATACAGGTTTCTTGTTCAAACAATACACACCTA       c.2520
 Q  T  M  K  S  S  A  C  K  I  Q  V  S  C  S  N  N  T  H  L         p.840

          .         .         .         .         .         .       g.95648
 GTTTCAGAGAATAAAGAACAGACTACACATCCTGAACTTTTTGCAGGAAACAAGACCCAA       c.2580
 V  S  E  N  K  E  Q  T  T  H  P  E  L  F  A  G  N  K  T  Q         p.860

          .         .         .         .         .         .       g.95708
 AACTTGCATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCAC       c.2640
 N  L  H  H  M  Q  Y  F  P  N  N  V  I  P  K  Q  D  L  L  H         p.880

          .         .         .         .         .         .       g.95768
 AGGTGCTTTCAAGAACAGGAGCAGAAGTCACAACAAGCTTCAGTTCTACAGGGATATAAA       c.2700
 R  C  F  Q  E  Q  E  Q  K  S  Q  Q  A  S  V  L  Q  G  Y  K         p.900

          .         .         .         .         .         .       g.95828
 AATAGAAACCAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTG       c.2760
 N  R  N  Q  D  M  S  G  Q  Q  A  A  Q  L  A  Q  Q  R  Y  L         p.920

          .         .         .         .         .         .       g.95888
 ATACATAACCATGCAAATGTTTTTCCTGTGCCTGACCAGGGAGGAAGTCACACTCAGACC       c.2820
 I  H  N  H  A  N  V  F  P  V  P  D  Q  G  G  S  H  T  Q  T         p.940

          .         .         .         .         .         .       g.95948
 CCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCTAAGGTGGCATCTCTTACAGAAGCAA       c.2880
 P  P  Q  K  D  T  Q  K  H  A  A  L  R  W  H  L  L  Q  K  Q         p.960

          .         .         .         .         .         .       g.96008
 GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCATAGTCAGATGCACAGGCCA       c.2940
 E  Q  Q  Q  T  Q  Q  P  Q  T  E  S  C  H  S  Q  M  H  R  P         p.980

          .         .         .         .         .         .       g.96068
 ATTAAGGTGGAACCTGGATGCAAGCCACATGCCTGTATGCACACAGCACCACCAGAAAAC       c.3000
 I  K  V  E  P  G  C  K  P  H  A  C  M  H  T  A  P  P  E  N         p.1000

          .         .         .         .         .         .       g.96128
 AAAACATGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTGCAG       c.3060
 K  T  W  K  K  V  T  K  Q  E  N  P  P  A  S  C  D  N  V  Q         p.1020

          .         .         .         .         .         .       g.96188
 CAAAAGAGCATCATTGAGACCATGGAGCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTA       c.3120
 Q  K  S  I  I  E  T  M  E  Q  H  L  K  Q  F  H  A  K  S  L         p.1040

          .         .         .         .         .         .       g.96248
 TTTGACCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAAGTTGAAATGTCAGGG       c.3180
 F  D  H  K  A  L  T  L  K  S  Q  K  Q  V  K  V  E  M  S  G         p.1060

          .         .         .         .         .         .       g.96308
 CCAGTCACAGTTTTGACTAGACAAACCACTGCTGCAGAACTTGATAGCCACACCCCAGCT       c.3240
 P  V  T  V  L  T  R  Q  T  T  A  A  E  L  D  S  H  T  P  A         p.1080

          .         .         .         .         .         .       g.96368
 TTAGAGCAGCAAACAACTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTTCTGTT       c.3300
 L  E  Q  Q  T  T  S  S  E  K  T  P  T  K  R  T  A  A  S  V         p.1100

          .         .         .         .         .         .       g.96428
 CTCAATAATTTTATAGAGTCACCTTCCAAATTACTAGATACTCCTATAAAAAATTTATTG       c.3360
 L  N  N  F  I  E  S  P  S  K  L  L  D  T  P  I  K  N  L  L         p.1120

          .         .         .         .          | 04        .    g.100475
 GATACACCTGTCAAGACTCAATATGATTTCCCATCTTGCAGATGTGTAG | AGCAAATTATT    c.3420
 D  T  P  V  K  T  Q  Y  D  F  P  S  C  R  C  V  E |   Q  I  I      p.1140

          .         .         .         .         .         .       g.100535
 GAAAAAGATGAAGGTCCTTTTTATACCCATCTAGGAGCAGGTCCTAATGTGGCAGCTATT       c.3480
 E  K  D  E  G  P  F  Y  T  H  L  G  A  G  P  N  V  A  A  I         p.1160

          .         . | 05       .         .         .         .    g.101999
 AGAGAAATCATGGAAGAAAG | GTTTGGACAGAAGGGTAAAGCTATTAGGATTGAAAGAGTC    c.3540
 R  E  I  M  E  E  R  |  F  G  Q  K  G  K  A  I  R  I  E  R  V      p.1180

          .         .         .         .         .     | 06   .    g.102701
 ATCTATACTGGTAAAGAAGGCAAAAGTTCTCAGGGATGTCCTATTGCTAAGTGG | GTGGTT    c.3600
 I  Y  T  G  K  E  G  K  S  S  Q  G  C  P  I  A  K  W   | V  V      p.1200

          .         .         .         .         .         .       g.102761
 CGCAGAAGCAGCAGTGAAGAGAAGCTACTGTGTTTGGTGCGGGAGCGAGCTGGCCACACC       c.3660
 R  R  S  S  S  E  E  K  L  L  C  L  V  R  E  R  A  G  H  T         p.1220

          .         .         .         .         .         .       g.102821
 TGTGAGGCTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAGGAATCCCGCTGTCTCTG       c.3720
 C  E  A  A  V  I  V  I  L  I  L  V  W  E  G  I  P  L  S  L         p.1240

          .         .         .         .         .         .       g.102881
 GCTGACAAACTCTACTCGGAGCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAAT       c.3780
 A  D  K  L  Y  S  E  L  T  E  T  L  R  K  Y  G  T  L  T  N         p.1260

          .         .    | 07    .         .         .         .    g.118781
 CGCCGGTGTGCCTTGAATGAAGA | GAGAACTTGCGCCTGTCAGGGGCTGGATCCAGAAACC    c.3840
 R  R  C  A  L  N  E  E  |  R  T  C  A  C  Q  G  L  D  P  E  T      p.1280

          .         .         .         .         .         .       g.118841
 TGTGGTGCCTCCTTCTCTTTTGGTTGTTCATGGAGCATGTACTACAATGGATGTAAGTTT       c.3900
 C  G  A  S  F  S  F  G  C  S  W  S  M  Y  Y  N  G  C  K  F         p.1300

          .         .         .         .         .     | 08   .    g.120890
 GCCAGAAGCAAGATCCCAAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAG | GAAGAG    c.3960
 A  R  S  K  I  P  R  K  F  K  L  L  G  D  D  P  K  E   | E  E      p.1320

          .         .         .         .         .         .       g.120950
 AAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTT       c.4020
 K  L  E  S  H  L  Q  N  L  S  T  L  M  A  P  T  Y  K  K  L         p.1340

          .         .     | 09   .         .         .         .    g.128771
 GCACCTGATGCATATAATAATCAG | ATTGAATATGAACACAGAGCACCAGAGTGCCGTCTG    c.4080
 A  P  D  A  Y  N  N  Q   | I  E  Y  E  H  R  A  P  E  C  R  L      p.1360

          .         .         .         .         .         .       g.128831
 GGTCTGAAGGAAGGCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACTTCTGTGCTCAT       c.4140
 G  L  K  E  G  R  P  F  S  G  V  T  A  C  L  D  F  C  A  H         p.1380

          .         .         .         .   | 10     .         .    g.131707
 GCCCACAGAGACTTGCACAACATGCAGAATGGCAGCACATTG | GTATGCACTCTCACTAGA    c.4200
 A  H  R  D  L  H  N  M  Q  N  G  S  T  L   | V  C  T  L  T  R      p.1400

          .         .         .         .         .         .       g.131767
 GAAGACAATCGAGAATTTGGAGGAAAACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTA       c.4260
 E  D  N  R  E  F  G  G  K  P  E  D  E  Q  L  H  V  L  P  L         p.1420

          .         .         .         .         .         .       g.131827
 TACAAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGG       c.4320
 Y  K  V  S  D  V  D  E  F  G  S  V  E  A  Q  E  E  K  K  R         p.1440

          .         .         .         .         .         .       g.131887
 AGTGGTGCCATTCAGGTACTGAGTTCTTTTCGGCGAAAAGTCAGGATGTTAGCAGAGCCA       c.4380
 S  G  A  I  Q  V  L  S  S  F  R  R  K  V  R  M  L  A  E  P         p.1460

          .         .         .         .         .         .       g.131947
 GTCAAGACTTGCCGACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGAAAAGCTTTCC       c.4440
 V  K  T  C  R  Q  R  K  L  E  A  K  K  A  A  A  E  K  L  S         p.1480

          .         .         .         .         .         .       g.132007
 TCCCTGGAGAACAGCTCAAATAAAAATGAAAAGGAAAAGTCAGCCCCATCACGTACAAAA       c.4500
 S  L  E  N  S  S  N  K  N  E  K  E  K  S  A  P  S  R  T  K         p.1500

          .         .         .        | 11.         .         .    g.134196
 CAAACTGAAAACGCAAGCCAGGCTAAACAGTTGGCAG | AACTTTTGCGACTTTCAGGACCA    c.4560
 Q  T  E  N  A  S  Q  A  K  Q  L  A  E |   L  L  R  L  S  G  P      p.1520

          .         .         .         .         .         .       g.134256
 GTCATGCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCAGCCACCACAGCCCCAGCAG       c.4620
 V  M  Q  Q  S  Q  Q  P  Q  P  L  Q  K  Q  P  P  Q  P  Q  Q         p.1540

          .         .         .         .         .         .       g.134316
 CAGCAGAGACCCCAGCAGCAGCAGCCACATCACCCTCAGACAGAGTCTGTCAACTCTTAT       c.4680
 Q  Q  R  P  Q  Q  Q  Q  P  H  H  P  Q  T  E  S  V  N  S  Y         p.1560

          .         .         .         .         .         .       g.134376
 TCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA       c.4740
 S  A  S  G  S  T  N  P  Y  M  R  R  P  N  P  V  S  P  Y  P         p.1580

          .         .         .         .         .         .       g.134436
 AACTCTTCACACACTTCAGATATCTATGGAAGCACCAGCCCTATGAACTTCTATTCCACC       c.4800
 N  S  S  H  T  S  D  I  Y  G  S  T  S  P  M  N  F  Y  S  T         p.1600

          .         .         .         .         .         .       g.134496
 TCATCTCAAGCTGCAGGTTCATATTTGAATTCTTCTAATCCCATGAACCCTTACCCTGGG       c.4860
 S  S  Q  A  A  G  S  Y  L  N  S  S  N  P  M  N  P  Y  P  G         p.1620

          .         .         .         .         .         .       g.134556
 CTTTTGAATCAGAATACCCAATATCCATCATATCAATGCAATGGAAACCTATCAGTGGAC       c.4920
 L  L  N  Q  N  T  Q  Y  P  S  Y  Q  C  N  G  N  L  S  V  D         p.1640

          .         .         .         .         .         .       g.134616
 AACTGCTCCCCATATCTGGGTTCCTATTCTCCCCAGTCTCAGCCGATGGATCTGTATAGG       c.4980
 N  C  S  P  Y  L  G  S  Y  S  P  Q  S  Q  P  M  D  L  Y  R         p.1660

          .         .         .         .         .         .       g.134676
 TATCCAAGCCAAGACCCTCTGTCTAAGCTCAGTCTACCACCCATCCATACACTTTACCAG       c.5040
 Y  P  S  Q  D  P  L  S  K  L  S  L  P  P  I  H  T  L  Y  Q         p.1680

          .         .         .         .         .         .       g.134736
 CCAAGGTTTGGAAATAGCCAGAGTTTTACATCTAAATACTTAGGTTATGGAAACCAAAAT       c.5100
 P  R  F  G  N  S  Q  S  F  T  S  K  Y  L  G  Y  G  N  Q  N         p.1700

          .         .         .         .         .         .       g.134796
 ATGCAGGGAGATGGTTTCAGCAGTTGTACCATTAGACCAAATGTACATCATGTAGGGAAA       c.5160
 M  Q  G  D  G  F  S  S  C  T  I  R  P  N  V  H  H  V  G  K         p.1720

          .         .         .         .         .         .       g.134856
 TTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCCACCTCTAGATTA       c.5220
 L  P  P  Y  P  T  H  E  M  D  G  H  F  M  G  A  T  S  R  L         p.1740

          .         .         .         .         .         .       g.134916
 CCACCCAATCTGAGCAATCCAAACATGGACTATAAAAATGGTGAACATCATTCACCTTCT       c.5280
 P  P  N  L  S  N  P  N  M  D  Y  K  N  G  E  H  H  S  P  S         p.1760

          .         .         .         .         .         .       g.134976
 CACATAATCCATAACTACAGTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATGCCCTG       c.5340
 H  I  I  H  N  Y  S  A  A  P  G  M  F  N  S  S  L  H  A  L         p.1780

          .         .         .         .         .         .       g.135036
 CATCTCCAAAACAAGGAGAATGACATGCTTTCCCACACAGCTAATGGGTTATCAAAGATG       c.5400
 H  L  Q  N  K  E  N  D  M  L  S  H  T  A  N  G  L  S  K  M         p.1800

          .         .         .         .         .         .       g.135096
 CTTCCAGCTCTTAACCATGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAAATTAAGT       c.5460
 L  P  A  L  N  H  D  R  T  A  C  V  Q  G  G  L  H  K  L  S         p.1820

          .         .         .         .         .         .       g.135156
 GATGCTAATGGTCAGGAAAAGCAGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCA       c.5520
 D  A  N  G  Q  E  K  Q  P  L  A  L  V  Q  G  V  A  S  G  A         p.1840

          .         .         .         .         .         .       g.135216
 GAGGACAACGATGAGGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCCTGACATTGGG       c.5580
 E  D  N  D  E  V  W  S  D  S  E  Q  S  F  L  D  P  D  I  G         p.1860

          .         .         .         .         .         .       g.135276
 GGAGTGGCCGTGGCTCCAACTCATGGGTCAATTCTCATTGAGTGTGCAAAGCGTGAGCTG       c.5640
 G  V  A  V  A  P  T  H  G  S  I  L  I  E  C  A  K  R  E  L         p.1880

          .         .         .         .         .         .       g.135336
 CATGCCACAACCCCTTTAAAGAATCCCAATAGGAATCACCCCACCAGGATCTCCCTCGTC       c.5700
 H  A  T  T  P  L  K  N  P  N  R  N  H  P  T  R  I  S  L  V         p.1900

          .         .         .         .         .         .       g.135396
 TTTTACCAGCATAAGAGCATGAATGAGCCAAAACATGGCTTGGCTCTTTGGGAAGCCAAA       c.5760
 F  Y  Q  H  K  S  M  N  E  P  K  H  G  L  A  L  W  E  A  K         p.1920

          .         .         .         .         .         .       g.135456
 ATGGCTGAAAAAGCCCGTGAGAAAGAGGAAGAGTGTGAAAAGTATGGCCCAGACTATGTG       c.5820
 M  A  E  K  A  R  E  K  E  E  E  C  E  K  Y  G  P  D  Y  V         p.1940

          .         .         .         .         .         .       g.135516
 CCTCAGAAATCCCATGGCAAAAAAGTGAAACGGGAGCCTGCTGAGCCACATGAAACTTCA       c.5880
 P  Q  K  S  H  G  K  K  V  K  R  E  P  A  E  P  H  E  T  S         p.1960

          .         .         .         .         .         .       g.135576
 GAGCCCACTTACCTGCGTTTCATCAAGTCTCTTGCCGAAAGGACCATGTCCGTGACCACA       c.5940
 E  P  T  Y  L  R  F  I  K  S  L  A  E  R  T  M  S  V  T  T         p.1980

          .         .         .         .         .         .       g.135636
 GACTCCACAGTAACTACATCTCCATATGCCTTCACTCGGGTCACAGGGCCTTACAACAGA       c.6000
 D  S  T  V  T  T  S  P  Y  A  F  T  R  V  T  G  P  Y  N  R         p.2000

                                                                    g.135645
 TATATATGA                                                          c.6009
 Y  I  X                                                            p.2002

          .         .         .         .         .         .       g.135705
 tatcacccccttttgttggttacctcacttgaaaagaccacaaccaacctgtcagtagta       c.*60

          .         .         .         .         .         .       g.135765
 tagttctcatgacgtgggcagtggggaaaggtcacagtattcatgacaaatgtggtggga       c.*120

          .         .         .         .         .         .       g.135825
 aaaacctcagctcaccagcaacaaaagaggttatcttaccatagcacttaattttcactg       c.*180

          .         .         .         .         .         .       g.135885
 gctcccaagtggtcacagatggcatctaggaaaagaccaaagcattctatgcaaaaagaa       c.*240

          .         .         .         .         .         .       g.135945
 ggtggggaagaaagtgttccgcaatttacatttttaaacactggttctattattggacga       c.*300

          .         .         .         .         .         .       g.136005
 gatgatatgtaaatgtgatcccccccccccgcttacaactctacacatctgtgaccactt       c.*360

          .         .         .         .         .         .       g.136065
 ttaataatatcaagtttgcatagtcatggaacacaaatcaaacaagtactgtagtattac       c.*420

          .         .         .         .         .         .       g.136125
 agtgacaggaatcttaaaataccatctggtgctgaatatatgatgtactgaaatactgga       c.*480

          .         .         .         .         .         .       g.136185
 attatggctttttgaaatgcagtttttactgtaatcttaacttttatttatcaaaatagc       c.*540

          .         .         .         .         .         .       g.136245
 tacaggaaacatgaatagcaggaaaacactgaatttgtttggatgttctaagaaatggtg       c.*600

          .         .         .         .         .         .       g.136305
 ctaagaaaatggtgtctttaatagctaaaaatttaatgcctttatatcatcaagatgcta       c.*660

          .         .         .         .         .         .       g.136365
 tcagtgtactccagtgcccttgaataataggggtaccttttcattcaagtttttatcata       c.*720

          .         .         .         .         .         .       g.136425
 attacctattcttacacaagcttagtttttaaaatgtggacattttaaaggcctctggat       c.*780

          .         .         .         .         .         .       g.136485
 tttgctcatccagtgaagtccttgtaggacaataaacgtatatatgtacatatatacaca       c.*840

          .         .         .         .         .         .       g.136545
 aacatgtatatgtgcacacacatgtatatgtataaatattttaaatggtgttttagaagc       c.*900

          .         .         .         .         .         .       g.136605
 actttgtctacctaagctttgacaacttgaacaatgctaaggtactgagatgtttaaaaa       c.*960

          .         .         .         .         .         .       g.136665
 acaagtttactttcattttagaatgcaaagttgatttttttaaggaaacaaagaaagctt       c.*1020

          .         .         .         .         .         .       g.136725
 ttaaaatatttttgcttttagccatgcatctgctgatgagcaattgtgtccatttttaac       c.*1080

          .         .         .         .         .         .       g.136785
 acagccagttaaatccaccatggggcttactggattcaagggaatacgttagtccacaaa       c.*1140

          .         .         .         .         .         .       g.136845
 acatgttttctggtgctcatctcacatgctatactgtaaaacagttttatacaaaattgt       c.*1200

          .         .         .         .         .         .       g.136905
 atgacaagttcattgctcaaaaatgtacagttttaagaattttctattaactgcaggtaa       c.*1260

          .         .         .         .         .         .       g.136965
 taattagctgcatgctgcagactcaacaaagctagttcactgaagcctatgctattttat       c.*1320

          .         .         .         .         .         .       g.137025
 ggatcataggctcttcagagaactgaatggcagtctgcctttgtgttgataattatgtac       c.*1380

          .         .         .         .         .         .       g.137085
 attgtgacgttgtcatttcttagcttaagtgtcctctttaacaagaggattgagcagact       c.*1440

          .         .         .         .         .         .       g.137145
 gatgcctgcataagatgaataaacagggttagttccatgtgaatctgtcagttaaaaaga       c.*1500

          .         .         .         .         .         .       g.137205
 aacaaaaacaggcagctggtttgctgtggtggttttaaatcattaatttgtataaagaag       c.*1560

          .         .         .         .         .         .       g.137265
 tgaaagagttgtatagtaaattaaattgtaaacaaaacttttttaatgcaatgctttagt       c.*1620

          .         .         .         .         .         .       g.137325
 attttagtactgtaaaaaaattaaatatatacatatatatatatatatatatatatatat       c.*1680

          .         .         .         .         .         .       g.137385
 atatgagtttgaagcagaattcacatcatgatggtgctactcagcctgctacaaatatat       c.*1740

          .         .         .         .         .         .       g.137445
 cataatgtgagctaagaattcattaaatgtttgagtgatgttcctacttgtcatatacct       c.*1800

          .         .         .         .         .         .       g.137505
 caacactagtttggcaataggatattgaactgagagtgaaagcattgtgtaccatcattt       c.*1860

          .         .         .         .         .         .       g.137565
 ttttccaagtccttttttttattgttaaaaaaaaaagcataccttttttcaatacttgat       c.*1920

          .         .         .         .         .         .       g.137625
 ttcttagcaagtataacttgaacttcaacctttttgttctaaaaattcagggatatttca       c.*1980

          .         .         .         .         .         .       g.137685
 gctcatgctctccctatgccaacatgtcacctgtgtttatgtaaaattgttgtaggttaa       c.*2040

          .         .         .         .         .         .       g.137745
 taaatatattctttgtcagggatttaacccttttattttgaatcccttctattttacttg       c.*2100

          .         .         .         .         .         .       g.137805
 tacatgtgctgatgtaactaaaactaattttgtaaatctgttggctctttttattgtaaa       c.*2160

          .         .         .         .         .         .       g.137865
 gaaaagcattttaaaagtttgaggaatcttttgactgtttcaagcaggaaaaaaaaatta       c.*2220

          .         .         .         .         .         .       g.137925
 catgaaaatagaatgcactgagttgataaagggaaaaattgtaaggcaggagtttggcaa       c.*2280

          .         .         .         .         .         .       g.137985
 gtggctgttggccagagacttacttgtaactctctaaatgaagtttttttgatcctgtaa       c.*2340

          .         .         .         .         .         .       g.138045
 tcactgaaggtacatactccatgtggacttcccttaaacaggcaaacacctacaggtatg       c.*2400

          .         .         .         .         .         .       g.138105
 gtgtgcaacagattgtacaattacattttggcctaaatacatttttgcttactagtattt       c.*2460

          .         .         .         .         .         .       g.138165
 aaaataaattcttaatcagaggaggcctttgggttttattggtcaaatctttgtaagctg       c.*2520

          .         .         .         .         .         .       g.138225
 gcttttgtctttttaaaaaatttcttgaatttgtggttgtgtccaatttgcaaacatttc       c.*2580

          .         .         .         .         .         .       g.138285
 caaaaatgtttgctttgcttacaaaccacatgattttaatgttttttgtataccataata       c.*2640

          .         .         .         .         .         .       g.138345
 tctagccccaaacatttgattactacatgtgcattggtgattttgatcatccattcttaa       c.*2700

          .         .         .         .         .         .       g.138405
 tatttgatttctgtgtcacctactgtcatttgttaaactgctggccaacaagaacaggaa       c.*2760

          .         .         .         .         .         .       g.138465
 gtatagtttggggggttggggagagtttacataaggaagagaagaaattgagtggcatat       c.*2820

          .         .         .         .         .         .       g.138525
 tgtaaatatcagatctataattgtaaatataaaacctgcctcagttagaatgaatggaaa       c.*2880

          .         .         .         .         .         .       g.138585
 gcagatctacaatttgctaatataggaatatcaggttgactatatagccatacttgaaaa       c.*2940

          .         .         .         .         .         .       g.138645
 tgcttctgagtggtgtcaactttacttgaatgaatttttcatcttgattgacgcacagtg       c.*3000

          .         .         .         .         .         .       g.138705
 atgtacagttcacttctgaagctagtggttaacttgtgtaggaaacttttgcagtttgac       c.*3060

          .         .         .         .         .         .       g.138765
 actaagataacttctgtgtgcatttttctatgcttttttaaaaactagtttcatttcatt       c.*3120

          .         .         .         .         .         .       g.138825
 ttcatgagatgtttggtttataagatctgaggatggttataaatactgtaagtattgtaa       c.*3180

          .         .         .         .         .         .       g.138885
 tgttatgaatgcaggttatttgaaagctgtttattattatatcattcctgataatgctat       c.*3240

          .         .         .         .                           g.138929
 gtgagtgtttttaataaaatttatatttatttaatgcactctaa                       c.*3284

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Tet methylcytosine dioxygenase 2 protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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