(used for variant description)
(last modified June 12, 2021)
This file was created to facilitate the description of sequence variants on transcript NM_005427.3 in the TP73 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000001.10, covering TP73 transcript NM_005427.3.
(upstream sequence)
. . . . . g.5050
aggggacgcagcgaaaccggggcccgcgccaggccagccgggacggacgc c.-61
. . . | 02 . . . g.34801
cgatgcccggggctgcgacggctgcag | agcgagctgccctcggaggccggcgtggggaag c.-1
. . . . . . g.34861
ATGGCCCAGTCCACCGCCACCTCCCCTGATGGGGGCACCACGTTTGAGCACCTCTGGAGC c.60
M A Q S T A T S P D G G T T F E H L W S p.20
| 03 . . . . . . g.35550
TCTCT | GGAACCAGACAGCACCTACTTCGACCTTCCCCAGTCAAGCCGGGGGAATAATGAG c.120
S L | E P D S T Y F D L P Q S S R G N N E p.40
. . . . . . g.35610
GTGGTGGGCGGAACGGATTCCAGCATGGACGTCTTCCACCTGGAGGGCATGACTACATCT c.180
V V G G T D S S M D V F H L E G M T T S p.60
| 04 . . . . . . g.60038
GTCATG | GCCCAGTTCAATCTGCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGCGGCC c.240
V M | A Q F N L L S S T M D Q M S S R A A p.80
. . . . . . g.60098
TCGGCCAGCCCCTACACCCCAGAGCACGCCGCCAGCGTGCCCACCCACTCGCCCTACGCA c.300
S A S P Y T P E H A A S V P T H S P Y A p.100
. . . . . . g.60158
CAACCCAGCTCCACCTTCGACACCATGTCGCCGGCGCCTGTCATCCCCTCCAACACCGAC c.360
Q P S S T F D T M S P A P V I P S N T D p.120
. . . . . . g.60218
TACCCCGGACCCCACCACTTTGAGGTCACTTTCCAGCAGTCCAGCACGGCCAAGTCAGCC c.420
Y P G P H H F E V T F Q Q S S T A K S A p.140
| 05 . . . . . g.74507
ACCTGGACG | TACTCCCCGCTCTTGAAGAAACTCTACTGCCAGATCGCCAAGACATGCCCC c.480
T W T | Y S P L L K K L Y C Q I A K T C P p.160
. . . . . . g.74567
ATCCAGATCAAGGTGTCCACCCCGCCACCCCCAGGCACCGCCATCCGGGCCATGCCTGTT c.540
I Q I K V S T P P P P G T A I R A M P V p.180
. . . . . . g.74627
TACAAGAAAGCGGAGCACGTGACCGACGTCGTGAAACGCTGCCCCAACCACGAGCTCGGG c.600
Y K K A E H V T D V V K R C P N H E L G p.200
. | 06 . . . . . g.75833
AGGGACTTCAACGAAG | GACAGTCTGCTCCAGCCAGCCACCTCATCCGCGTGGAAGGCAAT c.660
R D F N E G | Q S A P A S H L I R V E G N p.220
. . . . . . g.75893
AATCTCTCGCAGTATGTGGATGACCCTGTCACCGGCAGGCAGAGCGTCGTGGTGCCCTAT c.720
N L S Q Y V D D P V T G R Q S V V V P Y p.240
. | 07 . . . . . g.79598
GAGCCACCACAG | GTGGGGACGGAATTCACCACCATCCTGTACAACTTCATGTGTAACAGC c.780
E P P Q | V G T E F T T I L Y N F M C N S p.260
. . . . . . g.79658
AGCTGTGTAGGGGGCATGAACCGGCGGCCCATCCTCATCATCATCACCCTGGAGATGCGG c.840
S C V G G M N R R P I L I I I T L E M R p.280
| 08 . . . . . . g.80121
GA | TGGGCAGGTGCTGGGCCGCCGGTCCTTTGAGGGCCGCATCTGCGCCTGTCCTGGCCGC c.900
D | G Q V L G R R S F E G R I C A C P G R p.300
. . . . . . g.80181
GACCGAAAAGCTGATGAGGACCACTACCGGGAGCAGCAGGCCCTGAACGAGAGCTCCGCC c.960
D R K A D E D H Y R E Q Q A L N E S S A p.320
. . | 09 . . . . g.80599
AAGAACGGGGCCGCCAGCAAGCGTG | CCTTCAAGCAGAGCCCCCCTGCCGTCCCCGCCCTT c.1020
K N G A A S K R A | F K Q S P P A V P A L p.340
. . . . . | 10 . g.81768
GGTGCCGGTGTGAAGAAGCGGCGGCATGGAGACGAGGACACGTACTACCTTCAG | GTGCGA c.1080
G A G V K K R R H G D E D T Y Y L Q | V R p.360
. . . . . . g.81828
GGCCGGGAGAACTTTGAGATCCTGATGAAGCTGAAAGAGAGCCTGGAGCTGATGGAGTTG c.1140
G R E N F E I L M K L K E S L E L M E L p.380
. . . . . | 11 . g.82439
GTGCCGCAGCCACTGGTGGACTCCTATCGGCAGCAGCAGCAGCTCCTACAGAGGCC | GAGT c.1200
V P Q P L V D S Y R Q Q Q Q L L Q R P | S p.400
. . . . . . g.82499
CACCTACAGCCCCCGTCCTACGGGCCGGTCCTCTCGCCCATGAACAAGGTGCACGGGGGC c.1260
H L Q P P S Y G P V L S P M N K V H G G p.420
. . . . . . g.82559
ATGAACAAGCTGCCCTCCGTCAACCAGCTGGTGGGCCAGCCTCCCCCGCACAGTTCGGCA c.1320
M N K L P S V N Q L V G Q P P P H S S A p.440
. . | 12 . . . . g.83397
GCTACACCCAACCTGGGGCCCGTGG | GCCCCGGGATGCTCAACAACCATGGCCACGCAGTG c.1380
A T P N L G P V G | P G M L N N H G H A V p.460
. . . . . . g.83457
CCAGCCAACGGCGAGATGAGCAGCAGCCACAGCGCCCAGTCCATGGTCTCGGGGTCCCAC c.1440
P A N G E M S S S H S A Q S M V S G S H p.480
. . . . | 13 . . g.83914
TGCACTCCGCCACCCCCCTACCACGCCGACCCCAGCCTCGTCAG | TTTTTTAACAGGATTG c.1500
C T P P P P Y H A D P S L V S | F L T G L p.500
. . . . . . g.83974
GGGTGTCCAAACTGCATCGAGTATTTCACCTCCCAAGGGTTACAGAGCATTTACCACCTG c.1560
G C P N C I E Y F T S Q G L Q S I Y H L p.520
. | 14 . . . . g.85224
CAGAACCTGACCATTGAG | GACCTGGGGGCCCTGAAGATCCCCGAGCAGTACCGCATGACC c.1620
Q N L T I E | D L G A L K I P E Q Y R M T p.540
. . . . . . g.85284
ATCTGGCGGGGCCTGCAGGACCTGAAGCAGGGCCACGACTACAGCACCGCGCAGCAGCTG c.1680
I W R G L Q D L K Q G H D Y S T A Q Q L p.560
. . . . . . g.85344
CTCCGCTCTAGCAACGCGGCCACCATCTCCATCGGCGGCTCAGGGGAACTGCAGCGCCAG c.1740
L R S S N A A T I S I G G S G E L Q R Q p.580
. . . . . . g.85404
CGGGTCATGGAGGCCGTGCACTTCCGCGTGCGCCACACCATCACCATCCCCAACCGCGGC c.1800
R V M E A V H F R V R H T I T I P N R G p.600
. . . . . . g.85464
GGCCCAGGCGGCGGCCCTGACGAGTGGGCGGACTTCGGCTTCGACCTGCCCGACTGCAAG c.1860
G P G G G P D E W A D F G F D L P D C K p.620
. . . . . g.85515
GCCCGCAAGCAGCCCATCAAGGAGGAGTTCACGGAGGCCGAGATCCACTGA c.1911
A R K Q P I K E E F T E A E I H X p.636
. . . . . . g.85575
gggcctcgcctggctgcagcctgcgccaccgcccagagacccaagctgcctcccctctcc c.*60
. . . . . . g.85635
ttcctgtgtgtccaaaactgcctcaggaggcaggaccttcgggctgtgcccggggaaagg c.*120
. . . . . . g.85695
caaggtccggcccatccccaggcacctcacaggccccaggaaaggcccagccaccgaagc c.*180
. . . . . . g.85755
cgcctgtggacagcctgagtcacctgcagaaccttctggagctgccctagtgctgggctt c.*240
. . . . . . g.85815
gtggggcgggggctggcccactctcagccctgccactgccccggcgtgctccatggcagg c.*300
. . . . . . g.85875
cgtgggtggggaccgcagcgtcggctccgacttccaggcttcatcctagagactgtcatc c.*360
. . . . . . g.85935
tcccaaccaggcgaggtccttccaaaggaaaggatcctctttgctgatggactgccaaaa c.*420
. . . . . . g.85995
agtattttgcgacatcttttggttctggatagtagtgagcagccaagtgactgtgtctga c.*480
. . . . . . g.86055
aacaccagtgtattttcagggaatgtccctaactgcgtcttgcccgcgccgggggctggg c.*540
. . . . . . g.86115
gactctctctgctggacttgggactggcctctgcccccagcacgctgtattctgcaggac c.*600
. . . . . . g.86175
cgcctccttcctgcccctaacaacaaccacagtgttgctgaaattggagaaaactgggga c.*660
. . . . . . g.86235
gggcgcaaccccccccaggcgcggggaagcatgtggtaccgcctcagccagtgcccctca c.*720
. . . . . . g.86295
gcctggccacagtcgcctctcctcggggacccctcagcagaaagggacagcctgtcctta c.*780
. . . . . . g.86355
gaggactggaaattgtcaatatttgataaaatgatacccttttctacatggtgggtcagc c.*840
. . . . . . g.86415
ttttttttttttttttttaactttctttctcagcattctctttggagttcaacctagcgc c.*900
. . . . . . g.86475
ccatgagccaggctgaggaagctgagtgagaagccaggtgggcgggacttgttcccagga c.*960
. . . . . . g.86535
aggccgggtggggaggaagcctagagggaaccccaggaagggcaaatccaggcaaatctg c.*1020
. . . . . . g.86595
caggaatgctctgccatgggagcagctcctcccttgccacggccaccttctctagcactg c.*1080
. . . . . . g.86655
caaggtccacagggcattgctttcctttctaggcggtggcagtcagggaacagactgagg c.*1140
. . . . . . g.86715
taggtgtaggggggtctaggccttcgtggagcaccccagggagttagtaggccccgggga c.*1200
. . . . . . g.86775
gacagagtctgcacaggccctttctggggccacctccatccacgaggagcagcctgagcc c.*1260
. . . . . . g.86835
ttggtggccgaaccttgaccgtcccggagcacagcttcagggcagggaaccggagcccct c.*1320
. . . . . . g.86895
ggggggcctcacgggtgtgacgaggcccttcattgcaggcaggtgggccaatgggagccc c.*1380
. . . . . . g.86955
tcacccacgcaagccgagacaccacccagagtgcaggctgcctggccccttctggcacgg c.*1440
. . . . . . g.87015
ccagctccacaccccctgcctagggtatgtgtggtcctaagggctaggagcttcccctac c.*1500
. . . . . . g.87075
taacatctcccagaaaaagcagttaagcccctcagggcacagcaaggttagacacagccc c.*1560
. . . . . . g.87135
ccatccccagatcaggactccatcttgctaagtggcatcaccgtcaccagcctcccctta c.*1620
. . . . . . g.87195
tttaaaagcagcgactggtgttgccgcaggtacctggtctacgaagacgcaggcatccct c.*1680
. . . . . . g.87255
ctcccaccgtccacctccccgggggccgctgacagcacagtcgcctgggtgcacgcttgt c.*1740
. . . . . . g.87315
gggggcagcaggaacggggctgtcggctctcaggggatctggctgcagccagggcgaggg c.*1800
. . . . . . g.87375
cctggcccttccttccagctccttccggctccttccagctgaagggcaggaagctctggc c.*1860
. . . . . . g.87435
cgcttagcttctagggttccatctccctagaaaggtgcccacgcccagggcatcagtcag c.*1920
. . . . . . g.87495
tagcggcagcagcagcagactcggggctttcccagggtggcgcagccaccccagctgcat c.*1980
. . . . . . g.87555
gtcacctcagctctccatcttattgccattttgtagatgaggaagctgagaccagaaagg c.*2040
. . . . . . g.87615
ctaagacccatgccccaggcaccacacccatctcttgggggctgggcacctgctacccga c.*2100
. . . . . . g.87675
ggccacctcctgaagcccccactcttcccccatgttccacttcaggagccgcgggggccc c.*2160
. . . . . . g.87735
atcctgacacccggggttcctcagcccagcgcagatgtgcttcagttccagagggcttgt c.*2220
. . . . . . g.87795
tgatttgtttcttaggtacgttacctgtccaccctgagtccagtgaggctgtcccaagag c.*2280
. . . . . . g.87855
cccctgtagtgtgctcctgggaagggctgggggggctgggggggctgggagaggcccagg c.*2340
. . . . . . g.87915
ggcagctgtcactggaaccccagccagatgtccaaggaagccggccagaacacggagcag c.*2400
. . . . . . g.87975
ccagatggccccagctgcacctgtctagggagcccatgcagcctccttgcactggagaag c.*2460
. . . . . . g.88035
cagctgtgaaagtagacagagttgagacttcgccgtggtcaggagaaaatgcaaattccc c.*2520
. . . . . . g.88095
aggaacaagaatcctttaagtgatatgtttttataaaactaaacaaatcaacaaataaat c.*2580
. . . . . . g.88155
cttgaaggcggatggttttcccagcagtgcaggggttggagggaggctgctggcactcct c.*2640
. . . . . . g.88215
ggggccaagggggacaggcagtggtcctgagtctgctcagagaggcaaggcagaaggagc c.*2700
. . . . . . g.88275
tcgccaggcaggtcagctcacatctgtccaagtcgctctggtcagaaacagcgactctcc c.*2760
. . . . . . g.88335
cccattcccccagcgttcccaccaggcctgggctgctgggaagcccttgctgtacccagg c.*2820
. . . . . . g.88395
agcccgacccgcagtatcctggcacagagccacttgtcactcagaacagtcagtgtctcc c.*2880
. . . . . . g.88455
aacgcacaaacatccactcctctgttaccagttaaagcactttaatgctttaaggtgaaa c.*2940
. . . . . . g.88515
acgaaatcccatccgtgtttttcgtgtaagatcgtgcttctccgagcagtattaatggac c.*3000
. . . . . . g.88575
gccctccaatgacataacaactgtttttggtaatgtaatcttgggaaaatgtgttatttt c.*3060
. . . . . . g.88635
tttagctgtgtttcagtggggatttttgtttttgtaacataataaagtgtatgttccaat c.*3120
g.88637
ga c.*3122
(downstream sequence)
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