thyroid hormone receptor interactor 11 (TRIP11) - coding DNA reference sequence

(used for variant description)

(last modified October 22, 2017)


This file was created to facilitate the description of sequence variants on transcript NM_004239.3 in the TRIP11 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_016970.1, covering TRIP11 transcript NM_004239.3.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                                   .                g.5014
                                               gatccgctgccgct       c.-361

 .         .         .         .         .         .                g.5074
 ttccgagcgagtgtcatggcggccggcgtcgagttggcaggagtaacccacggaactgag       c.-301

 .         .         .         .         .         .                g.5134
 gaaagtcattagagctgagaaagaagtggcccaatctggacggtgggaattcgtgggaat       c.-241

 .         .         .         .         .         .                g.5194
 gagcagaaggccctccgtaggtgactgtgtcactagaggcgggcccctggtaaaattcca       c.-181

 .         .         .         .         .         .                g.5254
 ggccaggcctctgcgtttctaggcagaacctggagtcggccttgcctgagaacccagctt       c.-121

 .         .         .         .         .         .                g.5314
 tgtgttatcgtatcctgtctcgcgaaggcaggcgttcaaggatatttggtcggatcgccc       c.-61

 .         .         .         .         .         .                g.5374
 ggcggcgctaaacgttttcttttttccgagcggaccgggtcgttctctaaactcgccgcg       c.-1

          .         .         .         .         .         .       g.5434
 ATGTCGTCCTGGCTTGGGGGCCTCGGCTCCGGATTGGGCCAGTCTCTGGGTCAAGTCGGG       c.60
 M  S  S  W  L  G  G  L  G  S  G  L  G  Q  S  L  G  Q  V  G         p.20

          .         .         .         .         .         .       g.5494
 GGCAGCCTGGCTTCCCTCACTGGCCAGATATCAAACTTTACAAAGGATATGCTGATGGAG       c.120
 G  S  L  A  S  L  T  G  Q  I  S  N  F  T  K  D  M  L  M  E         p.40

          .          | 02        .         .         .         .    g.11847
 GGCACGGAGGAAGTGGAAG | CAGAATTACCTGATTCTAGGACAAAGGAAATTGAAGCCATT    c.180
 G  T  E  E  V  E  A |   E  L  P  D  S  R  T  K  E  I  E  A  I      p.60

          .         .  | 03      .         .         .         .    g.19678
 CATGCAATCTTGAGATCAGAG | AATGAAAGGCTTAAGAAACTTTGTACTGATCTAGAAGAG    c.240
 H  A  I  L  R  S  E   | N  E  R  L  K  K  L  C  T  D  L  E  E      p.80

          .         .         .         .         .         .       g.19738
 AAACATGAAGCATCAGAGATTCAAATAAAGCAGCAATCTACAAGTTACCGAAATCAACTT       c.300
 K  H  E  A  S  E  I  Q  I  K  Q  Q  S  T  S  Y  R  N  Q  L         p.100

          .   | 04     .         .         .         .         .    g.23276
 CAACAAAAAGAG | GTAGAAATCAGCCATCTTAAAGCCAGACAGATTGCACTCCAGGATCAG    c.360
 Q  Q  K  E   | V  E  I  S  H  L  K  A  R  Q  I  A  L  Q  D  Q      p.120

          .         .         .         .         .         .       g.23336
 TTGCTGAAACTGCAGTCAGCTGCTCAGTCAGTACCTTCAGGAGCTGGTGTACCAGCAACC       c.420
 L  L  K  L  Q  S  A  A  Q  S  V  P  S  G  A  G  V  P  A  T         p.140

          .         .         .         .         .         .       g.23396
 ACTGCATCATCTTCATTCGCTTATGGGATTAGTCATCATCCTTCAGCTTTCCATGACGAT       c.480
 T  A  S  S  S  F  A  Y  G  I  S  H  H  P  S  A  F  H  D  D         p.160

          .         .         .         .         .         .       g.23456
 GACATGGACTTTGGTGATATAATTTCATCCCAACAAGAAATAAACCGACTCTCAAATGAA       c.540
 D  M  D  F  G  D  I  I  S  S  Q  Q  E  I  N  R  L  S  N  E         p.180

          .         .         .         .         | 05         .    g.27321
 GTTTCAAGACTTGAGTCTGAAGTTGGCCATTGGAGGCATATTGCTCAG | ACTTCCAAAGCA    c.600
 V  S  R  L  E  S  E  V  G  H  W  R  H  I  A  Q   | T  S  K  A      p.200

          .         .         .         .         .        | 06.    g.29201
 CAAGGAACAGATAACTCTGATCAAAGTGAAATATGTAAACTACAAAATATCATTAAG | GAA    c.660
 Q  G  T  D  N  S  D  Q  S  E  I  C  K  L  Q  N  I  I  K   | E      p.220

          .         .         .         .         .         .       g.29261
 CTAAAACAGAACCGAAGTCAGGAAATTGATGACCATCAACATGAAATGTCAGTACTGCAG       c.720
 L  K  Q  N  R  S  Q  E  I  D  D  H  Q  H  E  M  S  V  L  Q         p.240

          .         .         .         .         .         .       g.29321
 AATGCACACCAACAGAAATTGACAGAAATAAGTCGACGACATCGAGAAGAATTAAGTGAC       c.780
 N  A  H  Q  Q  K  L  T  E  I  S  R  R  H  R  E  E  L  S  D         p.260

          .         .         .         .    | 07    .         .    g.30499
 TATGAAGAACGAATTGAAGAACTTGAAAATCTGTTACAACAAG | GTGGCTCTGGAGTTATA    c.840
 Y  E  E  R  I  E  E  L  E  N  L  L  Q  Q  G |   G  S  G  V  I      p.280

          .         .         .         .         .         .       g.30559
 GAAACTGATCTCTCTAAAATCTATGAGATGCAAAAAACTATTCAAGTTCTACAAATAGAA       c.900
 E  T  D  L  S  K  I  Y  E  M  Q  K  T  I  Q  V  L  Q  I  E         p.300

          .         .         .         .         .         .       g.30619
 AAAGTGGAGTCTACCAAAAAAATGGAACAACTTGAGGATAAAATAAAAGATATAAATAAA       c.960
 K  V  E  S  T  K  K  M  E  Q  L  E  D  K  I  K  D  I  N  K         p.320

          .         .         .         .         .         .       g.30679
 AAATTATCTTCTGCAGAAAATGACAGAGATATTTTGAGGAGAGAACAAGAACAGCTAAAT       c.1020
 K  L  S  S  A  E  N  D  R  D  I  L  R  R  E  Q  E  Q  L  N         p.340

          .         .         .         .         .         .       g.30739
 GTGGAAAAGAGACAAATAATGGAAGAATGTGAAAACTTGAAATTGGAATGTAGTAAATTG       c.1080
 V  E  K  R  Q  I  M  E  E  C  E  N  L  K  L  E  C  S  K  L         p.360

          .         .         .         .         .         .       g.30799
 CAGCCTTCTGCTGTGAAGCAAAGTGATACTATGACAGAAAAGGAAAGAATTCTTGCCCAG       c.1140
 Q  P  S  A  V  K  Q  S  D  T  M  T  E  K  E  R  I  L  A  Q         p.380

          .         .         .         .       | 08 .         .    g.33278
 AGTGCATCAGTGGAAGAAGTGTTCAGACTACAACAAGCACTGTCTG | ATGCCGAAAATGAA    c.1200
 S  A  S  V  E  E  V  F  R  L  Q  Q  A  L  S  D |   A  E  N  E      p.400

          .         .        | 09.         .         .         .    g.34020
 ATAATGAGATTGAGTAGTTTAAACCAG | GATAACAGTCTTGCTGAAGACAATCTGAAACTT    c.1260
 I  M  R  L  S  S  L  N  Q   | D  N  S  L  A  E  D  N  L  K  L      p.420

          .         .         .         .         .     | 10   .    g.37213
 AAAATGCGTATCGAAGTTTTAGAAAAAGAGAAGTCATTACTGAGTCAAGAAAAG | GAAGAA    c.1320
 K  M  R  I  E  V  L  E  K  E  K  S  L  L  S  Q  E  K   | E  E      p.440

          .         .         .         .         .         .       g.37273
 CTTCAGATGTCACTTTTAAAATTGAACAATGAATATGAAGTAATTAAAAGTACAGCTACA       c.1380
 L  Q  M  S  L  L  K  L  N  N  E  Y  E  V  I  K  S  T  A  T         p.460

          .         .         .         .         .         .       g.37333
 AGAGACATAAGTTTGGATTCAGAATTACATGACTTAAGACTTAATTTGGAGGCAAAGGAA       c.1440
 R  D  I  S  L  D  S  E  L  H  D  L  R  L  N  L  E  A  K  E         p.480

          .         .         .         .         .         .       g.37393
 CAAGAACTCAATCAGAGTATTAGTGAAAAGGAAACACTGATAGCTGAGATAGAAGAATTG       c.1500
 Q  E  L  N  Q  S  I  S  E  K  E  T  L  I  A  E  I  E  E  L         p.500

          .         .        | 11.         .         .         .    g.38644
 GACAGACAGAATCAAGAAGCTACAAAG | CACATGATTTTGATAAAAGATCAGCTATCAAAA    c.1560
 D  R  Q  N  Q  E  A  T  K   | H  M  I  L  I  K  D  Q  L  S  K      p.520

          .         .         .         .         .         .       g.38704
 CAACAAAATGAAGGAGATAGCATCATCAGTAAACTGAAACAAGATCTAAATGATGAAAAA       c.1620
 Q  Q  N  E  G  D  S  I  I  S  K  L  K  Q  D  L  N  D  E  K         p.540

          .         .         .         .         .         .       g.38764
 AAGAGAGTTCATCAACTTGAAGATGATAAAATGGACATTACTAAAGAGTTAGATGTACAG       c.1680
 K  R  V  H  Q  L  E  D  D  K  M  D  I  T  K  E  L  D  V  Q         p.560

          .         .         .         .         .         .       g.38824
 AAAGAAAAGCTAATTCAAAGTGAAGTGGCCCTAAATGATTTACATTTAACCAAGCAGAAA       c.1740
 K  E  K  L  I  Q  S  E  V  A  L  N  D  L  H  L  T  K  Q  K         p.580

          .         .         .         .         .         .       g.38884
 CTTGAGGACAAAGTAGAAAATTTAGTAGATCAGCTAAATAAATCACAAGAAAGTAATGTA       c.1800
 L  E  D  K  V  E  N  L  V  D  Q  L  N  K  S  Q  E  S  N  V         p.600

          .         .         .         .         .         .       g.38944
 AGCATCCAGAAGGAGAATTTAGAACTTAAGGAGCATATTAGACAAAATGAGGAGGAGCTT       c.1860
 S  I  Q  K  E  N  L  E  L  K  E  H  I  R  Q  N  E  E  E  L         p.620

          .         .         .         .         .         .       g.39004
 TCTAGAATAAGGAATGAGTTAATGCAGTCTCTAAATCAAGACTCTAATAGTAATTTTAAG       c.1920
 S  R  I  R  N  E  L  M  Q  S  L  N  Q  D  S  N  S  N  F  K         p.640

          .         .         .         .         .         .       g.39064
 GATACCTTACTTAAAGAAAGAGAAGCTGAAGTTAGAAACTTAAAGCAAAATCTTTCAGAA       c.1980
 D  T  L  L  K  E  R  E  A  E  V  R  N  L  K  Q  N  L  S  E         p.660

          .         .         .         .         .         .       g.39124
 TTAGAACAGCTCAATGAAAATTTAAAGAAAGTTGCTTTTGATGTCAAAATGGAAAATGAA       c.2040
 L  E  Q  L  N  E  N  L  K  K  V  A  F  D  V  K  M  E  N  E         p.680

          .         .         .         .         .         .       g.39184
 AAGTTAGTTTTAGCATGTGAAGATGTGAGGCATCAGTTAGAAGAATGTCTTGCTGGTAAC       c.2100
 K  L  V  L  A  C  E  D  V  R  H  Q  L  E  E  C  L  A  G  N         p.700

          .         .         .         .         .         .       g.39244
 AATCAGCTTTCTCTGGAAAAAAACACTATTGTGGAGACTCTAAAAATGGAAAAAGGAGAG       c.2160
 N  Q  L  S  L  E  K  N  T  I  V  E  T  L  K  M  E  K  G  E         p.720

          .         .         .         .         .         .       g.39304
 ATAGAGGCAGAATTGTGTTGGGCTAAAAAGAGGCTGTTGGAAGAAGCAAACAAGTATGAG       c.2220
 I  E  A  E  L  C  W  A  K  K  R  L  L  E  E  A  N  K  Y  E         p.740

          .         .         .         .         .         .       g.39364
 AAAACCATTGAAGAACTGTCAAATGCACGTAATTTGAATACCTCTGCCTTACAGCTGGAA       c.2280
 K  T  I  E  E  L  S  N  A  R  N  L  N  T  S  A  L  Q  L  E         p.760

          .         .         .         .         .         .       g.39424
 CATGAGCATTTAATTAAACTCAATCAAAAGAAAGACATGGAAATAGCAGAACTCAAAAAG       c.2340
 H  E  H  L  I  K  L  N  Q  K  K  D  M  E  I  A  E  L  K  K         p.780

          .         .         .         .         .         .       g.39484
 AATATTGAACAAATGGATACTGACCATAAAGAAACTAAGGACGTTTTGTCATCTAGTTTA       c.2400
 N  I  E  Q  M  D  T  D  H  K  E  T  K  D  V  L  S  S  S  L         p.800

          .         .         .         .         .         .       g.39544
 GAAGAGCAGAAGCAGTTGACACAACTTATAAACAAGAAAGAAATTTTTATTGAAAAGCTT       c.2460
 E  E  Q  K  Q  L  T  Q  L  I  N  K  K  E  I  F  I  E  K  L         p.820

          .         .         .         .         .         .       g.39604
 AAAGAAAGAAGTTCAAAGCTGCAGGAGGAATTGGATAAATATTCTCAGGCCTTAAGAAAA       c.2520
 K  E  R  S  S  K  L  Q  E  E  L  D  K  Y  S  Q  A  L  R  K         p.840

          .         .         .         .         .         .       g.39664
 AATGAAATTTTAAGACAGACCATAGAGGAAAAAGACCGAAGTCTTGGATCCATGAAAGAG       c.2580
 N  E  I  L  R  Q  T  I  E  E  K  D  R  S  L  G  S  M  K  E         p.860

          .         .         .         .         .         .       g.39724
 GAAAATAATCATCTGCAAGAAGAATTGGAACGACTCAGGGAAGAGCAGAGTCGAACCGCA       c.2640
 E  N  N  H  L  Q  E  E  L  E  R  L  R  E  E  Q  S  R  T  A         p.880

          .         .         .         .         .         .       g.39784
 CCTGTGGCTGACCCTAAAACCCTTGATAGTGTTACTGAACTAGCATCTGAGGTATCTCAA       c.2700
 P  V  A  D  P  K  T  L  D  S  V  T  E  L  A  S  E  V  S  Q         p.900

          .         .         .         .         .         .       g.39844
 CTGAACACGATCAAGGAACATCTTGAAGAGGAAATTAAACATCATCAAAAGATAATTGAA       c.2760
 L  N  T  I  K  E  H  L  E  E  E  I  K  H  H  Q  K  I  I  E         p.920

          .         .         .         .         .         .       g.39904
 GATCAAAACCAGAGTAAGATGCAACTACTTCAGTCTTTACAAGAGCAAAAGAAGGAAATG       c.2820
 D  Q  N  Q  S  K  M  Q  L  L  Q  S  L  Q  E  Q  K  K  E  M         p.940

          .         .         .         .         .         .       g.39964
 GATGAGTTTAGATACCAGCATGAGCAAATGAACGCCACACACACCCAGCTCTTTTTAGAG       c.2880
 D  E  F  R  Y  Q  H  E  Q  M  N  A  T  H  T  Q  L  F  L  E         p.960

          .         .         .         .         .         .       g.40024
 AAGGATGAGGAAATTAAGAGTTTGCAAAAAACAATTGAACAAATCAAAACCCAGTTGCAT       c.2940
 K  D  E  E  I  K  S  L  Q  K  T  I  E  Q  I  K  T  Q  L  H         p.980

          .         .         .         .         .         .       g.40084
 GAAGAAAGACAGGACATTCAAACAGATAACTCTGATATTTTTCAAGAAACAAAAGTTCAG       c.3000
 E  E  R  Q  D  I  Q  T  D  N  S  D  I  F  Q  E  T  K  V  Q         p.1000

          .         .         .         .         .         .       g.40144
 AGCCTTAATATAGAAAATGGAAGTGAAAAGCATGATTTATCTAAAGCTGAAACGGAAAGA       c.3060
 S  L  N  I  E  N  G  S  E  K  H  D  L  S  K  A  E  T  E  R         p.1020

          .         .         .         .         .         .       g.40204
 TTAGTGAAAGGAATAAAAGAGCGAGAACTGGAGATTAAACTTCTAAATGAAAAGAATATA       c.3120
 L  V  K  G  I  K  E  R  E  L  E  I  K  L  L  N  E  K  N  I         p.1040

          .         .         .         .         .         .       g.40264
 TCTTTAACTAAACAGATTGATCAGTTGTCCAAAGATGAAGTTGGTAAACTAACTCAGATT       c.3180
 S  L  T  K  Q  I  D  Q  L  S  K  D  E  V  G  K  L  T  Q  I         p.1060

          .         .         .         .         .         .       g.40324
 ATTCAGCAGAAAGATTTGGAGATACAAGCTCTTCATGCTAGAATTTCTTCAACTTCCCAT       c.3240
 I  Q  Q  K  D  L  E  I  Q  A  L  H  A  R  I  S  S  T  S  H         p.1080

          .         .         .         .         .         .       g.40384
 ACTCAAGATGTTGTTTACCTTCAACAGCAACTGCAGGCTTATGCTATGGAAAGAGAAAAG       c.3300
 T  Q  D  V  V  Y  L  Q  Q  Q  L  Q  A  Y  A  M  E  R  E  K         p.1100

          .         .         .         .         .         .       g.40444
 GTATTTGCTGTTTTGAATGAGAAGACTAGGGAAAATAGCCATCTAAAAACAGAATATCAC       c.3360
 V  F  A  V  L  N  E  K  T  R  E  N  S  H  L  K  T  E  Y  H         p.1120

          .         .         .         .         .         .       g.40504
 AAAATGATGGATATTGTTGCTGCCAAGGAAGCAGCTCTTATCAAACTGCAAGATGAAAAT       c.3420
 K  M  M  D  I  V  A  A  K  E  A  A  L  I  K  L  Q  D  E  N         p.1140

          .         .         .         .         .         .       g.40564
 AAAAAATTGTCCACTAGATTTGAAAGTAGTGGCCAAGATATGTTTAGAGAAACTATTCAG       c.3480
 K  K  L  S  T  R  F  E  S  S  G  Q  D  M  F  R  E  T  I  Q         p.1160

          .         .         .         .         .         .       g.40624
 AATTTATCACGTATCATTCGAGAAAAAGACATCGAAATAGATGCACTAAGTCAGAAATGT       c.3540
 N  L  S  R  I  I  R  E  K  D  I  E  I  D  A  L  S  Q  K  C         p.1180

          .         .         .         .         .         .       g.40684
 CAGACTTTATTGGCAGTTTTACAAACATCCAGCACTGGTAATGAGGCTGGAGGTGTTAAT       c.3600
 Q  T  L  L  A  V  L  Q  T  S  S  T  G  N  E  A  G  G  V  N         p.1200

          .         .         .         .         .         .       g.40744
 AGTAATCAATTTGAGGAGCTTCTACAGGAACGTGACAAGTTAAAACAGCAAGTAAAGAAA       c.3660
 S  N  Q  F  E  E  L  L  Q  E  R  D  K  L  K  Q  Q  V  K  K         p.1220

          .         .         .         .         .         .       g.40804
 ATGGAAGAGTGGAAGCAGCAGGTGATGACCACAGTACAAAATATGCAACACGAGTCAGCC       c.3720
 M  E  E  W  K  Q  Q  V  M  T  T  V  Q  N  M  Q  H  E  S  A         p.1240

          .         .         .         .         .         .       g.40864
 CAGCTTCAGGAAGAGCTTCACCAACTTCAAGCACAGGTTTTGGTTGACAGTGATAATAAT       c.3780
 Q  L  Q  E  E  L  H  Q  L  Q  A  Q  V  L  V  D  S  D  N  N         p.1260

          .         .         .         .         .         .       g.40924
 TCTAAATTACAAGTGGACTATACTGGCCTGATCCAAAGTTATGAGCAGAATGAAACCAAA       c.3840
 S  K  L  Q  V  D  Y  T  G  L  I  Q  S  Y  E  Q  N  E  T  K         p.1280

          .         .         .         .         .         .       g.40984
 CTCAAAAATTTTGGGCAGGAATTAGCACAAGTTCAGCACAGCATTGGGCAGCTTTGCAAT       c.3900
 L  K  N  F  G  Q  E  L  A  Q  V  Q  H  S  I  G  Q  L  C  N         p.1300

          .         .         .         .         .         .       g.41044
 ACCAAGGATCTTCTTTTAGGAAAACTTGATATTATTTCACCCCAGCTGTCTTCTGCATCA       c.3960
 T  K  D  L  L  L  G  K  L  D  I  I  S  P  Q  L  S  S  A  S         p.1320

          .         .         .         .         .         .       g.41104
 TTGCTTACTCCCCAGTCTGCAGAGTGTCTTAGAGCAAGTAAGTCTGAAGTATTGAGTGAA       c.4020
 L  L  T  P  Q  S  A  E  C  L  R  A  S  K  S  E  V  L  S  E         p.1340

          .         .         .         .         .         .       g.41164
 TCTTCTGAATTGCTTCAGCAAGAGTTAGAAGAGCTAAGAAAATCACTACAGGAAAAAGAT       c.4080
 S  S  E  L  L  Q  Q  E  L  E  E  L  R  K  S  L  Q  E  K  D         p.1360

          .         .         .         .         .         .       g.41224
 GCAACAATTAGAACTCTCCAGGAAAATAACCACAGATTGTCTGATTCGATTGCTGCCACC       c.4140
 A  T  I  R  T  L  Q  E  N  N  H  R  L  S  D  S  I  A  A  T         p.1380

          .         .         .         .         .         .       g.41284
 TCAGAGCTAGAAAGAAAAGAACACGAACAAACCGATTCAGAAATCAAGCAGCTAAAGGAG       c.4200
 S  E  L  E  R  K  E  H  E  Q  T  D  S  E  I  K  Q  L  K  E         p.1400

          .         .         .         .         .         .       g.41344
 AAACAAGATGTTTTGCAAAAGTTACTTAAGGAAAAAGACCTCTTAATCAAAGCCAAAAGT       c.4260
 K  Q  D  V  L  Q  K  L  L  K  E  K  D  L  L  I  K  A  K  S         p.1420

          .         .         .         .         .         .       g.41404
 GATCAACTACTTTCTTCCAATGAAAATTTCACTAACAAAGTAAATGAAAACGAACTTTTG       c.4320
 D  Q  L  L  S  S  N  E  N  F  T  N  K  V  N  E  N  E  L  L         p.1440

          .         .         .         .         .         .       g.41464
 AGGCAGGCAGTAACAAACCTGAAGGAGAGAATATTAATTCTAGAGATGGACATTGGCAAA       c.4380
 R  Q  A  V  T  N  L  K  E  R  I  L  I  L  E  M  D  I  G  K         p.1460

          .         .         .         .         .         .       g.41524
 CTAAAAGGAGAAAATGAAAAAATAGTGGAAACATACAGGGGAAAGGAAACAGAATATCAA       c.4440
 L  K  G  E  N  E  K  I  V  E  T  Y  R  G  K  E  T  E  Y  Q         p.1480

          .         .         .         .         .         .       g.41584
 GCGTTACAAGAGACTAACATGAAGTTTTCTATGATGCTGCGAGAAAAAGAGTTTGAGTGC       c.4500
 A  L  Q  E  T  N  M  K  F  S  M  M  L  R  E  K  E  F  E  C         p.1500

          .         .         .         .         .        | 12.    g.44954
 CACTCAATGAAGGAGAAGGCTCTTGCTTTTGAACAGCTATTGAAAGAGAAAGAACAG | GGC    c.4560
 H  S  M  K  E  K  A  L  A  F  E  Q  L  L  K  E  K  E  Q   | G      p.1520

          .         .         .         .         .         .       g.45014
 AAGACTGGAGAGTTAAATCAGCTTTTAAATGCAGTTAAATCAATGCAGGAGAAGACAGTT       c.4620
 K  T  G  E  L  N  Q  L  L  N  A  V  K  S  M  Q  E  K  T  V         p.1540

          .         .         .         .         .         .       g.45074
 GTGTTTCAACAGGAGAGAGACCAAGTCATGTTGGCCCTGAAACAAAAACAAATGGAAAAT       c.4680
 V  F  Q  Q  E  R  D  Q  V  M  L  A  L  K  Q  K  Q  M  E  N         p.1560

          .         | 13         .         .         .         .    g.45668
 ACTGCCCTACAGAATGAG | GTTCAACGTTTACGTGACAAAGAATTTCGTTCAAACCAAGAG    c.4740
 T  A  L  Q  N  E   | V  Q  R  L  R  D  K  E  F  R  S  N  Q  E      p.1580

          .         .         .         .         .         .       g.45728
 CTAGAGAGATTGCGTAATCATCTTTTAGAATCAGAAGATTCTTATACCCGTGAAGCTTTG       c.4800
 L  E  R  L  R  N  H  L  L  E  S  E  D  S  Y  T  R  E  A  L         p.1600

          .         .         .         .         .         .       g.45788
 GCTGCAGAAGATAGAGAGGCTAAACTAAGAAAGAAAGTCACAGTATTGGAGGAAAAGCTA       c.4860
 A  A  E  D  R  E  A  K  L  R  K  K  V  T  V  L  E  E  K  L         p.1620

          .         .         .   | 14     .         .         .    g.49572
 GTTTCATCCTCTAATGCAATGGAAAATGCAAG | CCATCAAGCCAGTGTGCAGGTAGAGTCA    c.4920
 V  S  S  S  N  A  M  E  N  A  S  |  H  Q  A  S  V  Q  V  E  S      p.1640

          .         .         .         .         .         .       g.49632
 TTGCAAGAACAGTTGAATGTAGTTTCCAAGCAAAGGGATGAAACTGCGCTGCAGCTTTCT       c.4980
 L  Q  E  Q  L  N  V  V  S  K  Q  R  D  E  T  A  L  Q  L  S         p.1660

          .         .         .         .         .         .       g.49692
 GTCTCTCAGGAACAAGTAAAGCAGTATGCTCTGTCACTGGCCAACCTGCAGATGGTACTA       c.5040
 V  S  Q  E  Q  V  K  Q  Y  A  L  S  L  A  N  L  Q  M  V  L         p.1680

          .       | 15 .         .         .         .         .    g.51191
 GAGCATTTCCAACAAG | AGGAAAAAGCTATGTATTCTGCTGAACTCGAAAAGCAAAAACAG    c.5100
 E  H  F  Q  Q  E |   E  K  A  M  Y  S  A  E  L  E  K  Q  K  Q      p.1700

          .         .         .         .         .         .       g.51251
 CTTATAGCTGAATGGAAGAAAAACGCAGAAAATCTGGAAGGAAAAGTGATATCATTACAG       c.5160
 L  I  A  E  W  K  K  N  A  E  N  L  E  G  K  V  I  S  L  Q         p.1720

  | 16       .         .         .         .         .         .    g.56736
  | GAATGTTTGGATGAAGCAAATGCTGCATTGGATTCAGCATCAAGACTTACAGAACAGTTA    c.5220
  | E  C  L  D  E  A  N  A  A  L  D  S  A  S  R  L  T  E  Q  L      p.1740

          .         .         .         . | 17       .         .    g.68890
 GATGTAAAAGAAGAACAAATTGAAGAACTTAAAAGACAAA | ATGAGCTCCGACAAGAAATG    c.5280
 D  V  K  E  E  Q  I  E  E  L  K  R  Q  N |   E  L  R  Q  E  M      p.1760

          .         .         .         .         .         .       g.68950
 CTGGATGATGTACAAAAGAAATTGATGAGCTTAGCAAACAGCTCAGAAGGAAAAGTAGAC       c.5340
 L  D  D  V  Q  K  K  L  M  S  L  A  N  S  S  E  G  K  V  D         p.1780

    | 18     .         .         .         .         .         .    g.69831
 AA | AGTCCTAATGAGAAACCTCTTCATTGGTCATTTCCACACACCGAAAAATCAGCGTCAT    c.5400
 K  |  V  L  M  R  N  L  F  I  G  H  F  H  T  P  K  N  Q  R  H      p.1800

          .         .         .         .         .        | 19.    g.70319
 GAAGTGTTACGGTTAATGGGGAGCATCCTGGGCGTCAGAAGGGAGGAGATGGAGCAG | TTG    c.5460
 E  V  L  R  L  M  G  S  I  L  G  V  R  R  E  E  M  E  Q   | L      p.1820

          .         .         .         .         .         .       g.70379
 TTTCATGACGATCAGGGCGGTGTTACCAGGTGGATGACTGGGTGGCTTGGAGGAGGATCA       c.5520
 F  H  D  D  Q  G  G  V  T  R  W  M  T  G  W  L  G  G  G  S         p.1840

          .         .         .         .         .     | 20   .    g.72204
 AAAAGTGTTCCCAACACACCTTTGAGACCAAATCAGCAATCTGTGGTTAATAGT | TCTTTT    c.5580
 K  S  V  P  N  T  P  L  R  P  N  Q  Q  S  V  V  N  S   | S  F      p.1860

          .         .         .         .         .         .       g.72264
 TCAGAACTTTTTGTTAAATTTCTAGAAACAGAATCTCATCCATCCATTCCACCACCAAAG       c.5640
 S  E  L  F  V  K  F  L  E  T  E  S  H  P  S  I  P  P  P  K         p.1880

          .         .         .         .         .         .       g.72324
 CTTTCTGTTCATGATATGAAACCTCTGGATTCACCAGGAAGAAGAAAAAGAGATACAAAT       c.5700
 L  S  V  H  D  M  K  P  L  D  S  P  G  R  R  K  R  D  T  N         p.1900

          .          | 21        .         .         .         .    g.75207
 GCACCAGAAAGTTTTAAAG | ATACAGCAGAATCCAGGTCTGGTAGAAGAACAGATGTAAAT    c.5760
 A  P  E  S  F  K  D |   T  A  E  S  R  S  G  R  R  T  D  V  N      p.1920

          .         .         .         .         .         .       g.75267
 CCGTTTTTGGCTCCTCGCTCGGCAGCTGTACCTCTTATTAACCCAGCTGGACTTGGACCT       c.5820
 P  F  L  A  P  R  S  A  A  V  P  L  I  N  P  A  G  L  G  P         p.1940

          .         .         .         .         .         .       g.75327
 GGTGGGCCCGGGCATCTTCTTCTGAAACCCATCTCAGATGTTTTGCCCACATTTACACCT       c.5880
 G  G  P  G  H  L  L  L  K  P  I  S  D  V  L  P  T  F  T  P         p.1960

          .         .         .         .         .         .       g.75387
 TTGCCAGCGTTACCTGACAACAGTGCTGGGGTTGTGCTGAAAGACCTTTTAAAGCAATAG       c.5940
 L  P  A  L  P  D  N  S  A  G  V  V  L  K  D  L  L  K  Q  X         p.1979

          .         .         .         .         .         .       g.75447
 atgattctcaagccagagacaatctagcactttaaagaaaccatgaacactatatgtatg       c.*60

          .         .         .         .         .         .       g.75507
 tactttatcacaaagtggcctttggggagaaagtcatgtatttgttcgcaattatgcttt       c.*120

          .         .         .         .         .         .       g.75567
 ctctgaatttaataaaaatattcctaatgcttttagaaactgcaggtgtcaggagcaagt       c.*180

          .         .         .         .         .         .       g.75627
 gtttgctatataatctgctttattccttctgatttgacctaatttaagctaggaacattt       c.*240

          .         .         .         .         .         .       g.75687
 aatttatcttttaccttaatttacaaaaatacagacagacaaaaatactagtagctatat       c.*300

          .         .         .         .         .         .       g.75747
 ggcagctttttatttccttttgtgatttccaagctcatttaagctagagattgtggttta       c.*360

          .         .         .         .         .         .       g.75807
 tcaagagagtgttttttttttttaaacgaagaataaaaaaatactagtagtggcttctct       c.*420

          .         .         .         .         .         .       g.75867
 gcatagtgcagaaagttgatttgaagcatatattgatcatctttagaggactttgtggag       c.*480

          .         .         .         .         .         .       g.75927
 acaggccaacaagattgttgctggaaggtcataggttccctgaggtgaagtatgtatttg       c.*540

          .         .         .         .         .         .       g.75987
 gtcctgtgcaatattatcatgtgtgtagattctttttttgtttgttttaaatagagatgg       c.*600

          .         .         .         .         .         .       g.76047
 ggtctcactatgttgccaggctggcctcaaactcctgggctcaagtgatcctcccacctc       c.*660

          .         .         .         .         .         .       g.76107
 agcctcccaaagtgctgggattaaggcatgagccactgcgcctggccctgtgtgtaaatt       c.*720

          .         .         .         .         .         .       g.76167
 catgtgactaccaccacaggcaagacacggaagacttccattacaagcatccccctgtgt       c.*780

          .         .         .         .         .         .       g.76227
 tgccctctcataatcattgccacctctctccctggccctctccttaatccctgacaacca       c.*840

          .         .         .         .         .         .       g.76287
 cttactgttctccatctcagtcattttgttattttgagaatgttatataaatggaatcaa       c.*900

          .         .         .         .         .         .       g.76347
 tatataccctcttgagactggctttttttcactcagcataattcccttgagatccatcca       c.*960

          .         .         .         .         .         .       g.76407
 aggctttggatgtatcactagtttgttcctttttattgttgagcatatagtgcagatata       c.*1020

          .         .         .         .         .         .       g.76467
 tcacttagttttaacagctaaggtatctatttaaagataccatcttaaaactaaatgtta       c.*1080

          .         .         .         .         .         .       g.76527
 cacaaattcatgcaactttcatataagcattaaaccatacagctgcatctacgtaagtat       c.*1140

          .         .         .         .         .         .       g.76587
 aattagcaaaatcactgaacatgccacttcctgcctccgtctgcggtgttgacatatgag       c.*1200

          .         .         .         .         .         .       g.76647
 gtacagcaatccgagagtcaactgttatcacggtggccactgagggcagtgaaatcactt       c.*1260

          .         .         .         .         .         .       g.76707
 tgatagcaccagtacccagatgtttgaaacttaagaaagtatttctttaatttttcataa       c.*1320

          .         .         .         .         .         .       g.76767
 acccatcataaaaaaaaaatcccgacttgaaacttaactgtatctggatgttcatatttt       c.*1380

          .         .         .         .         .         .       g.76827
 tattagttgttgaagttgtacatttaaaaagatatttcttgcaaattttgtaaatttcta       c.*1440

          .         .         .         .         .         .       g.76887
 tatgcttttaaaatagaaacatttgtataacaaggaaggatgaaaataaaacaaattcaa       c.*1500

          .         .         .         .         .         .       g.76947
 atatgtgaatagtcctggctgaggccagaactaaatttggttatttgcaagttttactgt       c.*1560

          .         .         .         .         .         .       g.77007
 gattaactgtactttctaatgtatttggaagactggaagtcttaattccatgttgatggg       c.*1620

          .         .         .         .         .         .       g.77067
 tgaaacttgtttttctgaaaaatgaagtaactgaaaatgctgcttcagaatgtcttgtat       c.*1680

          .         .         .         .         .         .       g.77127
 ctccttagataactaatttatattgccattctttatttactatactttaaaggaagttgt       c.*1740

          .         .         .                                     g.77161
 catgcaagttctatattagaactgtcaaactgcc                                 c.*1774

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Thyroid hormone receptor interactor 11 protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

Powered by LOVD v.3.0 Build 20a
©2004-2017 Leiden University Medical Center