UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B) - 6198 nt intron 03 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.6594
gtgagtcctggtaactgaagtaaaaagggaatttctttgtcatttgtatgtttaagacaa  c.370+60

         .         .         .         .         .         .  g.6654
ctcgtgcattgcgttgcttcctagagttttacacatttaataagcttattgcagtcttat  c.370+120

         .         .         .         .         .         .  g.6714
aaatagacgtgacttttcacagtccttggttatttttattaacctactatttttttagtt  c.370+180

         .         .         .         .         .         .  g.6774
tgatcaactgagtgaaattgcaactgttttctcctcgtgtgacacattttttgccctggc  c.370+240

         .         .         .         .         .         .  g.6834
ttaaacctgctgttttgactgtagaatttcagccgcagtactgataagtgactcttaaac  c.370+300

         .         .         .         .         .         .  g.6894
ttgtttgataagttttaaatatttacttcttattttgcttcgaggacaaacatttattta  c.370+360

         .         .         .         .         .         .  g.6954
attcaaatccattaagccaacagttcccaattgggatactgtttaacattctcacaaagt  c.370+420

         .         .         .         .         .         .  g.7014
tgtatataattaaaacatgaaacttgatacatctcggcctggtgtggtggctcacgcctg  c.370+480

         .         .         .         .         .         .  g.7074
ttatcccagcactttgggatgccgaggcaggtggatcacgaggtcaggagatcgagacca  c.370+540

         .         .         .         .         .         .  g.7134
gcctggccaacgtggtgaaaccccatctctactaaaaatgctaaaaaaattagccaggcg  c.370+600

         .         .         .         .         .         .  g.7194
tggcggtccacgcctgtaatcccagctacttgggaggctgaggcagaagaatcgcttgaa  c.370+660

         .         .         .         .         .         .  g.7254
cctgggaggcagaggttgcagtgagctgagatcacgccactgcactccagcctggcgaca  c.370+720

         .         .         .         .         .         .  g.7314
gagcgagactctgtctcaaaatcgaaaaaaagaaacttgatacatctcttactttatatc  c.370+780

         .         .         .         .         .         .  g.7374
cagaaaggtccagtctatagggaagacacatttctactttaacactctattatctgctac  c.370+840

         .         .         .         .         .         .  g.7434
ctacatttagccagagaatatctaagctgccatttgccacttttctttttggtttgcaat  c.370+900

         .         .         .         .         .         .  g.7494
tataggtaaatagtgtgtcttcttgttttgttttgtttttttcaatattacttcaaagtt  c.370+960

         .         .         .         .         .         .  g.7554
ggtaaaaattaaatttttgtcagggactatgccagtaaaaattgaaggattgccactgtt  c.370+1020

         .         .         .         .         .         .  g.7614
tgtccaacttttattaatctccccaagccagctatttttccactccaactattttattcc  c.370+1080

         .         .         .         .         .         .  g.7674
agtagatatttaactagattctagttacttagcctggaaatctgagttgtgtttaatttt  c.370+1140

         .         .         .         .         .         .  g.7734
ttccttttttaaaaatctcttacatgtaagttatgaatcttgtcaatttattgtttatct  c.370+1200

         .         .         .         .         .         .  g.7794
tttgagatagggtctccacccaggctggagtgctgtggcgcaatcagagctcactgcagc  c.370+1260

         .         .         .         .         .         .  g.7854
ctggaattcctggactcaagcaatcctcccacctcagcctcctgagtagctgggactaca  c.370+1320

         .         .         .         .         .         .  g.7914
gatgtatgtcaccatgcctggctaattttctttaaattttttatagagatggggtctcac  c.370+1380

         .         .         .         .         .         .  g.7974
tacgttgcccaggctggtcttgaactcctgggctcaagtgatttccccccccccacctca  c.370+1440

         .         .         .         .         .         .  g.8034
gcctcccaaagtgctgggattacaggtgcgagccaccatacccagctcaacaccacttat  c.370+1500

         .         .         .         .         .         .  g.8094
taaagagactatcctttcctcattgtgttttttgtttgtttgtttgttttgttttgtttt  c.370+1560

         .         .         .         .         .         .  g.8154
taaatcttagagacaaggtctgcttatgttgcccaggctggattttattgttttttttta  c.370+1620

         .         .         .         .         .         .  g.8214
atatcttgttcacctagccttaaacagtcacactttatgtcctcatcacttaatgcctag  c.370+1680

         .         .         .         .         .         .  g.8274
acaaccactgtctctaaacttacaggattttccatttttttcattcttgtataattcagt  c.370+1740

         .         .         .         .         .         .  g.8334
ctattatattgccatgaaattaatctttttgaaaataatgatttaaattaacagttgggg  c.370+1800

         .         .         .         .         .         .  g.8394
gaaaaagtccaaactccttagcctggtagtcagggtcctccatattctggcctcacttct  c.370+1860

         .         .         .         .         .         .  g.8454
gtttcttcagcctgtcttccacaatttccctctgtttcagtctggtttatctattccttc  c.370+1920

         .         .         .         .         .         .  g.8514
tcaaatatatcacagttttgttttttggtttttatttttgttttttttctttttcttctc  c.370+1980

         .         .         .         .         .         .  g.8574
tctctctctctttttttttttgagacagagtcttaactctgtcgcccaggctggagtaca  c.370+2040

         .         .         .         .         .         .  g.8634
gtggcacaatcttggctcattacaacctccgcctcctgggttcaagcaattctcgttcct  c.370+2100

         .         .         .         .         .         .  g.8694
cagcctgccgacttagctgggattacaggtgtgtgccgccacgcccagctaatttttgta  c.370+2160

         .         .         .         .         .         .  g.8754
attttaggagatggggtttcaccatgttggccaggctggtctcaaactcctggcctcaag  c.370+2220

         .         .         .         .         .         .  g.8814
caatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcctg  c.370+2280

         .         .         .         .         .         .  g.8874
gcctaatatatcacagttttgaagctaatctgattctctactcactgggattcccaacat  c.370+2340

         .         .         .         .         .         .  g.8934
aatttttcctccatgactgctttgcagtgccttctggtcaattctgtttatttttatttt  c.370+2400

         .         .         .         .         .         .  g.8994
tctgcttatgtctacatgccaatgatttaaggataggataccttgtttttgacattctgt  c.370+2460

         .         .         .         .         .         .  g.9054
gacagggtgcttgtgaatttttttcccattagtcacttggggtttttgtattgaaatata  c.370+2520

         .         .         .         .         .         .  g.9114
actcacctataataaaattcatcctcttaaagcgtacaattcagtggtttctggtatatt  c.370+2580

         .         .         .         .         .         .  g.9174
cacaaggtagtacaaccatcagtactaattccagaatgttttcatccctccaaaaagaaa  c.370+2640

         .         .         .         .         .         .  g.9234
cccatatctattagtagttacctcccattctctccctccagcccctggcaaccactaatc  c.370+2700

         .         .         .         .         .         .  g.9294
tactttatgtatctatgatttccctccatttcatataaatgtaatcatacaatatgtggt  c.370+2760

         .         .         .         .         .         .  g.9354
cttttctgactggcttcttttacctagcacaatgttttcaaggtccatccatgttgtaac  c.370+2820

         .         .         .         .         .         .  g.9414
atataacatatatcattacctcattccttttgcatttttaaaaattgtaaaaatacacgt  c.370+2880

         .         .         .         .         .         .  g.9474
aacataaaatttaccatcttaaccattttaagtgtacagttcagtagcattaaggtatat  c.370+2940

         .         .         .         .         .         .  g.9534
tcacactgttgtgcaacaatcttgggaactttttcatcttgaaaaactgaaactctttac  c.370+3000

         .         .         .         .         .         .  g.9594
ccattaaacaactccttatttcccttcctccagcccctggcaaccaccattataccttgt  c.370+3060

         .         .         .           g.9633
gtctgtatgagtttcactactgtaggtaccacatatagg  c.370+3099

--------------------- middle of intron ---------------------
         g.9634               .         .         .           g.9672
         c.371-3099  tggaaacatacagtgtctgtctggcttatttcatttagc  c.371-3061

.         .         .         .         .         .           g.9732
ataatatcttcaaggtgtatccatgtcgtagcatgtgtcagaattttcatcttttttttt  c.371-3001

.         .         .         .         .         .           g.9792
tttttttttttttttgagatggagtctcactttgttgcccaggctggaatgcagtggcgc  c.371-2941

.         .         .         .         .         .           g.9852
gatctcagctcactgcaacctccgcttcctgggttcaagcaattctccagcctcagcctc  c.371-2881

.         .         .         .         .         .           g.9912
ccaagtagctgggattacaggtacccaccaccacagctggctaatttttttgtacttttg  c.371-2821

.         .         .         .         .         .           g.9972
gtaaagatggggtttcactgtgttggccaggctagtttcaaactcctgacctgaagtgac  c.371-2761

.         .         .         .         .         .           g.10032
atgcctgcctcagcctcccaaaatgctaggaattacaggcatgagccactgcccccagcc  c.371-2701

.         .         .         .         .         .           g.10092
tcatttttaagactaatattccagtatatgtatataccacattttgtgtatccattcatc  c.371-2641

.         .         .         .         .         .           g.10152
tgtcaaggggtattcgagttgcttccactcttggctattgtgaacaatattgttatgaac  c.371-2581

.         .         .         .         .         .           g.10212
acagatgtgcacatattcgagtccttgttctcactgcttttggatatataccgagaaatg  c.371-2521

.         .         .         .         .         .           g.10272
gaatttctggagtcatttggtaattctatttttattttattatttatttattttgagaca  c.371-2461

.         .         .         .         .         .           g.10332
gagtctctgtcacacaggctggagtgcagtggcatgatcttggctcactgcaacctccac  c.371-2401

.         .         .         .         .         .           g.10392
ctcccaggtgcaagcaattctcctgcctcagcctcccaagtatctgggattacagacacc  c.371-2341

.         .         .         .         .         .           g.10452
tgccaccacaccctgctaattttttatgtttgtggtagagacggagtttcaccatgttgg  c.371-2281

.         .         .         .         .         .           g.10512
ccaggctggtctcaaactcctgacctcaagtgatgcgcccacctcggcctctcaaagtgc  c.371-2221

.         .         .         .         .         .           g.10572
tgaggttacaggtgtgagccactgtgccccgccggtagttcttttttgttttgttttgtt  c.371-2161

.         .         .         .         .         .           g.10632
tttttgagatggaatttcgccctcattgcccaggctggagtaagtacaatggcgcgatct  c.371-2101

.         .         .         .         .         .           g.10692
tccctcattgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcctgag  c.371-2041

.         .         .         .         .         .           g.10752
tagctgggattacaggtgcccaccaccacacccagctaatttttgtatttttagtagaga  c.371-1981

.         .         .         .         .         .           g.10812
tggggttttaccatgttagtcaggctggcccaataattctatttttaatgttttatggaa  c.371-1921

.         .         .         .         .         .           g.10872
ctgccatactgttttccatgcagctgcatcattttacattcccaccaatacatgagtgtt  c.371-1861

.         .         .         .         .         .           g.10932
ccagtttctccacatctttgccaacacttgttattttctgctttttgatagtagtcctcc  c.371-1801

.         .         .         .         .         .           g.10992
taataggcgtgagatgatacctcattgtggttttgatttgcatttccctaatgactagta  c.371-1741

.         .         .         .         .         .           g.11052
atgtggaacatatttccatatgcttgttagccatttgtatattatctttgaagaaatgtc  c.371-1681

.         .         .         .         .         .           g.11112
tattcaagtcttttgaccattttttaaattgggttatttggttttttgttgttgagttat  c.371-1621

.         .         .         .         .         .           g.11172
aggagttctttatatattctcgatattaccccttatcagataatataatttgcaaatatt  c.371-1561

.         .         .         .         .         .           g.11232
tctcccattccatgggttgccttttcactctgttgattgtgtcttttgatgcatagaagt  c.371-1501

.         .         .         .         .         .           g.11292
ttctaattttgacgtagtccaatttatctattttttactttttttaaataagagatatac  c.371-1441

.         .         .         .         .         .           g.11352
tttatatttttgttttattgtggtaagaacacttaacatgagatctaccctctgtatttt  c.371-1381

.         .         .         .         .         .           g.11412
tacttttgttgcctgtgcttttggtgtcctggtgtatttttttttaagtgttaacagatt  c.371-1321

.         .         .         .         .         .           g.11472
tttccccagctttattgagctataattgacaaataaaataatatatatttaaattttact  c.371-1261

.         .         .         .         .         .           g.11532
atgtaataattgttttttcttttttctttttctttttttttttttttttttaccaggctc  c.371-1201

.         .         .         .         .         .           g.11592
gagtgcagtggcacaatctcagcttactgcaacctccgcctcccaggttcaagtgattct  c.371-1141

.         .         .         .         .         .           g.11652
cctgcctcagtctcccaagtagctgggattacaggcgtgcactatcacgcctggctaatt  c.371-1081

.         .         .         .         .         .           g.11712
tttgtatttttatttatttttatttttatgtatttatttttttgagacggagtcttactc  c.371-1021

.         .         .         .         .         .           g.11772
tgtcgcccaggctggagtgcagtggcatgatctcggctcactgcaatctctgcctcctgg  c.371-961

.         .         .         .         .         .           g.11832
gttcaagtgattctcatgcctcagcctccagagtagctgggattgcaggcacgtgccacc  c.371-901

.         .         .         .         .         .           g.11892
acgcccagctaatttttgtatttttagtagagacagtgtttcaccatgttggccaggcag  c.371-841

.         .         .         .         .         .           g.11952
gtctcaaacttctgacctcaggtgatcctctcatctcggcctcccaaaatgctgggatta  c.371-781

.         .         .         .         .         .           g.12012
taggcataagccacggtgcccagcccaacgtgataattttatatatgtatacattatgaa  c.371-721

.         .         .         .         .         .           g.12072
atgtatacattatgaaatgtatacatattgtatacatatatacattatgaaatgtataca  c.371-661

.         .         .         .         .         .           g.12132
taatgtatacatatatacattatgaaatatatacaatcaagttaacacattcatcacctc  c.371-601

.         .         .         .         .         .           g.12192
acataacacatcacctcaaatagttacacttttaaaaaataacagctttattgagatata  c.371-541

.         .         .         .         .         .           g.12252
attcacatgcctgaaatagtcacccttttaaagtatacagttcagtgaattttagtatat  c.371-481

.         .         .         .         .         .           g.12312
tcataggcttatgagcctatcaccacaatctaaatttagaacatgttcatcacccctaag  c.371-421

.         .         .         .         .         .           g.12372
agaaaccccacccattagttgtcactcctcattcttctcaccacttctaccccaaactcc  c.371-361

.         .         .         .         .         .           g.12432
aggcagctactactctacgttctgtctctatagatttgcctattttggagatttctaaca  c.371-301

.         .         .         .         .         .           g.12492
ttttaaaatgaaaaatagtttgtagggtctttttcacattaaaatatcacattttataag  c.371-241

.         .         .         .         .         .           g.12552
ttgaatttatatgaatattttactttcatgccgtgttgtttcactatgttatcagtgtga  c.371-181

.         .         .         .         .         .           g.12612
atttgtggctccttttgtagtatgttgattatggttgtgccagtgtgctttatgcctttg  c.371-121

.         .         .         .         .         .           g.12672
ggagaccctcttcagatgactgccatcaaaagagtcatagaaagcaatgggttgattccc  c.371-61

.         .         .         .         .         .           g.12732
ttatatccacttttgacattttctttgttatagcaagtgtggtattttttttctaaacag  c.371-1


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