(used for variant description)
(last modified July 22, 2019)
This file was created to facilitate the description of sequence variants on transcript NM_033305.2 in the VPS13A gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_008931.1, covering VPS13A transcript NM_033305.2.
(upstream sequence)
. . g.5020
ttcctccctctcagggctgc c.-241
. . . . . . g.5080
gcgcccaggtctgcgccgcgctccgcctccagccgcgcgcagacttgcgcacgcgtcgtg c.-181
. . . . . . g.5140
agagcgaccgcctccgtctctcgctgggctcgctagggctgcgcgttgggccagcggggg c.-121
. . . . . . g.5200
cgccgcagctgaagccgccccggagccggtgaaccgaattacctcgagggaggggcgtgg c.-61
. . . . . . g.5260
ggaaggcggcgggaggaggagcgcacgggccggctgccgtgcccaccacggctgaggaac c.-1
. . . . . . g.5320
ATGGTTTTCGAGTCGGTGGTCGTGGACGTGTTGAACCGGTTCTTGGGGGACTATGTGGTG c.60
M V F E S V V V D V L N R F L G D Y V V p.20
. . . . | 02 . . g.27520
GACTTGGACACGTCCCAGCTCTCTCTGGGCATCTGGAAAG | GAGCTGTGGCCCTCAAGAAT c.120
D L D T S Q L S L G I W K G | A V A L K N p.40
. . | 03 . . . . g.28956
CTTCAAATTAAAGAAAATGCCCTG | AGTCAACTGGATGTACCATTTAAAGTTAAAGTTGGT c.180
L Q I K E N A L | S Q L D V P F K V K V G p.60
| 04. . . . . . g.32921
CACATAG | GTAATCTTAAACTTATAATTCCATGGAAAAACCTTTATACTCAACCTGTTGAA c.240
H I G | N L K L I I P W K N L Y T Q P V E p.80
. . . . | 05 . . g.33550
GCCGTATTGGAAGAAATTTATTTACTTATAGTGCCTTCTTCTA | GAATAAAATATGATCCT c.300
A V L E E I Y L L I V P S S R | I K Y D P p.100
. . . . . . g.33610
TTAAAAGAAGAGAAACAACTCATGGAAGCAAAGCAACAGGAACTGAAAAGAATAGAAGAA c.360
L K E E K Q L M E A K Q Q E L K R I E E p.120
. . | 06 . . . . g.37013
GCAAAACAAAAAGTAGTTGATCAAG | AACAACATCTGCCGGAAAAACAGGACACTTTTGCA c.420
A K Q K V V D Q E | Q H L P E K Q D T F A p.140
. . . . . . g.37073
GAAAAATTAGTTACACAGATCATAAAAAATCTTCAGGTGAAAATTTCCAGTATCCATATT c.480
E K L V T Q I I K N L Q V K I S S I H I p.160
. | 07 . . . . . g.38216
CGTTATGAAGATGAT | ATCACAAATCGGGACAAACCGCTGTCATTTGGTATTTCCCTTCAA c.540
R Y E D D | I T N R D K P L S F G I S L Q p.180
. | 08 . . . . . g.40569
AATCTGAGCATGCAG | ACAACTGATCAATACTGGGTTCCATGTTTACATGATGAAACTGAG c.600
N L S M Q | T T D Q Y W V P C L H D E T E p.200
. | 09 . . . . . g.40834
AAACTGGTTCGTAAG | TTAATCCGATTGGATAACCTGTTTGCCTATTGGAATGTGAAGTCT c.660
K L V R K | L I R L D N L F A Y W N V K S p.220
. . . | 10 . . . g.41908
CAGATGTTTTATCTTAGTGATTATGATAACTCCTTG | GACGACTTGAAGAATGGCATTGTC c.720
Q M F Y L S D Y D N S L | D D L K N G I V p.240
. . . | 11 . . . g.47535
AATGAAAATATTGTTCCAGAAGGTTATGATTTTG | TATTTCGTCCCATATCTGCTAATGCC c.780
N E N I V P E G Y D F V | F R P I S A N A p.260
. . . . . . g.47595
AAACTTGTGATGAATCGCCGATCTGATTTTGACTTTTCTGCCCCCAAAATAAACTTGGAA c.840
K L V M N R R S D F D F S A P K I N L E p.280
. . . . | 12 . . g.47850
ATTGAGTTACATAACATAGCAATTGAATTTAATAAACCACAG | TATTTCAGTATTATGGAG c.900
I E L H N I A I E F N K P Q | Y F S I M E p.300
. . . . . . g.47910
CTTCTTGAATCAGTTGATATGATGGCACAAAATCTGCCATATAGGAAGTTCAAACCTGAT c.960
L L E S V D M M A Q N L P Y R K F K P D p.320
. . | 13 . . . g.48771
GTGCCTCTTCACCACCATGCCAGAGAATG | GTGGGCTTATGCTATACATGGCGTTCTTGAA c.1020
V P L H H H A R E W | W A Y A I H G V L E p.340
. . . . . . g.48831
GTAAATGTTTGCCCCAGGTTATGGATGTGGTCATGGAAGCATATTAGAAAACATAGGCAA c.1080
V N V C P R L W M W S W K H I R K H R Q p.360
. . . . . . g.48891
AAAGTGAAGCAATATAAAGAACTGTATAAAAAAAAGTTAACAAGTAAGAAGCCACCTGGT c.1140
K V K Q Y K E L Y K K K L T S K K P P G p.380
. . | 14 . . . . g.53520
GAACTTCTCGTGTCTTTGGAG | GAGTTGGAAAAAACCTTGGATGTCTTTAATATAACTATA c.1200
E L L V S L E | E L E K T L D V F N I T I p.400
. . | 15 . . . . g.54057
GCTAGACAGACGGCAGAAGTTGAG | GTAAAGAAAGCTGGATACAAAATTTACAAAGAAGGA c.1260
A R Q T A E V E | V K K A G Y K I Y K E G p.420
. . . . . . g.54117
GTAAAAGATCCAGAGGATAATAAAGGGTGGTTTAGCTGGCTATGGTCTTGGTCAGAACAA c.1320
V K D P E D N K G W F S W L W S W S E Q p.440
. . . | 16. . . g.54969
AATACTAATGAACAGCAACCAGATGTTCAACCTGAAA | CTCTTGAAGAAATGTTGACACCT c.1380
N T N E Q Q P D V Q P E T | L E E M L T P p.460
. . . . . . g.55029
GAAGAAAAAGCTTTACTCTATGAAGCAATTGGCTATAGTGAAACAGCAGTTGATCCAACT c.1440
E E K A L L Y E A I G Y S E T A V D P T p.480
. | 17 . . . . . g.55725
TTACTAAAAACA | TTTGAAGCCTTGAAGTTTTTTGTCCACTTGAAAAGTATGTCTATTGTT c.1500
L L K T | F E A L K F F V H L K S M S I V p.500
. . . . . . g.55785
CTAAGAGAAAATCATCAAAAACCTGAGCTGGTAGATATTGTAATAGAAGAATTTAGCACC c.1560
L R E N H Q K P E L V D I V I E E F S T p.520
. . . | 18 . . . g.65582
TTAATTGTGCAAAGACCAGGAGCACAAGCAATAAA | ATTTGAAACTAAAATAGATTCATTT c.1620
L I V Q R P G A Q A I K | F E T K I D S F p.540
. . . . . . g.65642
CATATTACTGGCTTACCAGATAATTCAGAAAAACCCCGCCTCCTGTCTTCATTGGATGAT c.1680
H I T G L P D N S E K P R L L S S L D D p.560
. . . . . . g.65702
GCAATGTCACTTTTCCAAATTACATTTGAGATAAATCCATTAGATGAAACTGTTTCTCAG c.1740
A M S L F Q I T F E I N P L D E T V S Q p.580
. . . . | 19 . . g.65842
AGGTGTATCATAGAAGCTGAACCTTTAGAAATCATATATGATGCA | AGGACAGTGAATAGT c.1800
R C I I E A E P L E I I Y D A | R T V N S p.600
. . . . . . g.65902
ATAGTGGAATTCTTCAGACCTCCAAAAGAGGTACATCTAGCACAGCTCACTGCAGCAACT c.1860
I V E F F R P P K E V H L A Q L T A A T p.620
. . . . | 20 . . g.74834
TTGACAAAACTGGAAGAATTTCGCAGTAAGACAGCAACAG | GTCTACTGTATATTATTGAA c.1920
L T K L E E F R S K T A T G | L L Y I I E p.640
. . . . . . g.74894
ACACAGAAAGTTCTTGATCTCAAAATTAATTTGAAGGCTTCATATATTATTGTCCCACAA c.1980
T Q K V L D L K I N L K A S Y I I V P Q p.660
. . . . . | 21. g.77655
GATGGAATTTTTAGTCCTACATCAAATCTGCTTCTTTTGGACCTTGGTCATCTAAAG | GTG c.2040
D G I F S P T S N L L L L D L G H L K | V p.680
. . . . . . g.77715
ACGAGTAAAAGTCGTTCTGAATTACCAGATGTGAAACAAGGTGAGGCCAATCTTAAAGAG c.2100
T S K S R S E L P D V K Q G E A N L K E p.700
. . . . . . g.77775
ATAATGGATAGAGCTTATGATTCATTTGATATTCAACTTACAAGTGTACAGCTGCTTTAC c.2160
I M D R A Y D S F D I Q L T S V Q L L Y p.720
. | 22 . . . . . g.79840
AGTAGAGTTG | GTGATAATTGGAGAGAAGCACGAAAACTCAGTGTATCTACCCAGCATATT c.2220
S R V G | D N W R E A R K L S V S T Q H I p.740
. . . . . . g.79900
TTGGTACCCATGCACTTCAATTTGGAACTGTCTAAGGCCATGGTTTTCATGGATGTAAGG c.2280
L V P M H F N L E L S K A M V F M D V R p.760
| 23 . . . . . g.87693
ATGCCCAA | ATTCAAGATTTATGGAAAGTTACCTCTTATTTCTTTACGAATCTCAGATAAA c.2340
M P K | F K I Y G K L P L I S L R I S D K p.780
. . . . . . g.87753
AAACTACAAGGGATTATGGAATTGATTGAAAGCATTCCAAAACCTGAACCAGTAACTGAA c.2400
K L Q G I M E L I E S I P K P E P V T E p.800
. . | 24. . . . g.100868
GTATCTGCCCCTGTCAAATCATTCCAG | ATTCAAACATCTACTTCTTTGGGAACATCACAG c.2460
V S A P V K S F Q | I Q T S T S L G T S Q p.820
. . . . . | 25 . g.103061
ATTTCACAGAAAATAATTCCTCTCTTGGAACTTCCATCTGTTTCTGAAGATG | ATTCAGAG c.2520
I S Q K I I P L L E L P S V S E D D | S E p.840
. . . . . . g.103121
GAGGAATTTTTTGATGCACCATGTAGTCCCTTGGAAGAACCTCTTCAGTTTCCAACTGGA c.2580
E E F F D A P C S P L E E P L Q F P T G p.860
. . . . . . g.103181
GTTAAAAGTATTCGAACCAGAAAGTTACAAAAGCAGGATTGTTCAGTAAATATGACTACA c.2640
V K S I R T R K L Q K Q D C S V N M T T p.880
. . | 26. . . . g.103653
TTTAAAATAAGATTTGAAGTACCAAAG | GTTTTGATCGAGTTTTATCACCTTGTTGGAGAT c.2700
F K I R F E V P K | V L I E F Y H L V G D p.900
. . . . . . g.103713
TGTGAACTATCTGTGGTAGAAATTCTTGTTTTAGGATTGGGTGCAGAAATTGAGATTAGA c.2760
C E L S V V E I L V L G L G A E I E I R p.920
. . . . . . g.103773
ACATACGATTTGAAAGCAAATGCCTTTTTGAAAGAGTTCTGCTTAAAATGCCCAGAATAC c.2820
T Y D L K A N A F L K E F C L K C P E Y p.940
| 27 . . . . . . g.107770
TTGG | ATGAAAACAAGAAACCAGTTTATTTGGTTACAACCCTGGATAACACAATGGAAGAC c.2880
L D | E N K K P V Y L V T T L D N T M E D p.960
. . | 28 . . . . g.109458
CTGTTAACGCTGGAATATGTAAAG | GCTGAAAAGAATGTACCCGACTTGAAAAGTACCTAT c.2940
L L T L E Y V K | A E K N V P D L K S T Y p.980
. . | 29 . . . . g.109712
AACAATGTTTTACAATTGATTAAG | GTAAATTTTTCCTCTTTGGATATTCATTTACACACT c.3000
N N V L Q L I K | V N F S S L D I H L H T p.1000
. . . . . . g.109772
GAAGCACTTCTGAATACAATAAATTATCTTCATAATATCCTTCCGCAATCAGAGGAAAAA c.3060
E A L L N T I N Y L H N I L P Q S E E K p.1020
. . . . . | 30 g.110912
TCAGCCCCAGTGTCCACTACAGAGACTGAAGACAAAGGAGATGTCATTAAAAAATTAG | CT c.3120
S A P V S T T E T E D K G D V I K K L A | p.1040
. . . . . . g.110972
TTAAAACTATCCACAAATGAAGATATCATTACTTTGCAGATTTTAGCAGAATTATCGTGT c.3180
L K L S T N E D I I T L Q I L A E L S C p.1060
. . . . . | 31 . g.111107
TTACAGATCTTTATTCAAGATCAGAAATGTAACATTTCTGAAATTAAGATTGAAG | GGCTT c.3240
L Q I F I Q D Q K C N I S E I K I E G | L p.1080
. . . . . . g.111167
GATTCTGAGATGATTATGAGGCCTTCAGAAACTGAAATAAACGCAAAGCTAAGGAATATA c.3300
D S E M I M R P S E T E I N A K L R N I p.1100
. . . | 32 . . g.120917
ATTGTTTTAGATTCTGATATAACAGCTATATACAAAAAG | GCTGTTTATATCACTGGAAAA c.3360
I V L D S D I T A I Y K K | A V Y I T G K p.1120
. . . . . . g.120977
GAAGTTTTCAGCTTCAAAATGGTTTCTTACATGGATGCAACTGCTGGTTCTGCATACACA c.3420
E V F S F K M V S Y M D A T A G S A Y T p.1140
. . . . . . g.121037
GATATGAATGTGGTTGACATTCAGGTTAATTTAATAGTTGGTTGCATTGAAGTAGTTTTT c.3480
D M N V V D I Q V N L I V G C I E V V F p.1160
. . | 33. . . . g.123130
GTCACGAAATTTCTATATTCTATATTG | GCTTTTATAGATAATTTTCAGGCAGCTAAACAA c.3540
V T K F L Y S I L | A F I D N F Q A A K Q p.1180
. . . . . . g.123190
GCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTC c.3600
A L A E A T V Q A A G M A A T G V K E L p.1200
. . . . . . g.123250
GCACAAAGGAGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATC c.3660
A Q R S S R M A L D I N I K A P V V V I p.1220
. . . . . . g.123310
CCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGATTTTGGACTAATTACAATGACA c.3720
P Q S P V S E N V F V A D F G L I T M T p.1240
. . . . . . g.123370
AATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATA c.3780
N T F H M I T E S Q S S P P P V I D L I p.1260
. . . | 34 . . . g.130498
ACAATAAAGCTGAGTGAAATGCGACTATACAG | ATCTCGATTTATTAATGATGCATACCAG c.3840
T I K L S E M R L Y R | S R F I N D A Y Q p.1280
. . . . . . g.130558
GAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTTGTGGTTGAACGAAATTTATGC c.3900
E V L D L L L P L N L E V V V E R N L C p.1300
. . . . . . g.130618
TGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAG c.3960
W E W Y Q E V P C F N V N A Q L K P M E p.1320
| 35 . . . . . . g.135560
| TTCATTCTTAGTCAAGAAGATATAACAACTATTTTTAAAACATTGCATGGCAATATATGG c.4020
| F I L S Q E D I T T I F K T L H G N I W p.1340
. . . . . . g.135620
TATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTAGT c.4080
Y E K D G S A S P A V T K D Q Y S A T S p.1360
. . . | 36 . . . g.141573
GGAGTTACTACTAATGCTTCACACCATTCAGGAG | GAGCAACTGTGGTGACAGCTGCTGTG c.4140
G V T T N A S H H S G G | A T V V T A A V p.1380
. . . . . . g.141633
GTAGAAGTACATTCACGTGCCTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACT c.4200
V E V H S R A L L V K T T L N I S F K T p.1400
. . . . | 37 . . g.142068
GATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACAG | GCTTCCTTTACAGATGTT c.4260
D D L T M V L Y S P G P K Q | A S F T D V p.1420
. . . . . . g.142128
CGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAA c.4320
R D P S L K L A E F K L E N I I S T L K p.1440
. . . . . . g.142188
ATGTATACAGATGGCTCAACATTTTCTTCCTTCTCATTAAAAAACTGTATTTTAGATGAT c.4380
M Y T D G S T F S S F S L K N C I L D D p.1460
. . . | 38 . . . g.142836
AAAAGACCTCATGTCAAGAAAGCAACTCCTCG | AATGATAGGACTGACAGTTGGTTTTGAC c.4440
K R P H V K K A T P R | M I G L T V G F D p.1480
. . . . . . g.142896
AAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCG c.4500
K K D M M D I K Y R K V R D G C V T D A p.1500
. . . . . . g.142956
GTCTTTCAAGAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTC c.4560
V F Q E M Y I C A S V E F L Q T V A N V p.1520
. . . . . . g.143016
TTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGACTGCT c.4620
F L E A Y T T G T A V E T S V Q T W T A p.1540
. | 39 . . . . . g.143779
AAGGAAGAAG | TACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAAT c.4680
K E E V | P T Q E S V K W E I N V I I K N p.1560
. . . . . . g.143839
CCTGAAATTGTGTTTGTAGCTGACATGACAAAAAATGATGCTCCTGCTTTAGTCATTACA c.4740
P E I V F V A D M T K N D A P A L V I T p.1580
. . . . . . g.143899
ACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCATT c.4800
T Q C E I C Y K G N L E N S T M T A A I p.1600
. . . . . . g.143959
AAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACT c.4860
K D L Q V R A C P F L P V K R K G K I T p.1620
| 40 . . . . . . g.145218
ACT | GTTTTGCAGCCCTGTGACTTGTTTTATCAAACTACTCAGAAAGGTACAGATCCACAA c.4920
T | V L Q P C D L F Y Q T T Q K G T D P Q p.1640
. . . | 41 . . . g.145814
GTGATCGATATGTCAGTAAAATCCCTGACACTAAAG | GTTTCACCAGTTATTATAAATACT c.4980
V I D M S V K S L T L K | V S P V I I N T p.1660
. . . . . . g.145874
ATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCT c.5040
M I T I T S A L Y T T K E T I P E E T A p.1680
. . . . . . g.145934
TCTTCTACTGCACATTTATGGGAAAAGAAGGATACAAAGACTTTAAAAATGTGGTTTCTT c.5100
S S T A H L W E K K D T K T L K M W F L p.1700
. . . . . . g.145994
GAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACTGAATTGGTACCCAAAGGCGAG c.5160
E E S N E T E K I A P T T E L V P K G E p.1720
. . . . . . g.146054
ATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGA c.5220
M I K M N I D S I F I V L E A G I G H R p.1740
. . . . . . g.146114
ACAGTACCTATGCTTCTGGCAAAGTCACGTTTTTCAGGGGAAGGCAAAAACTGGAGTTCC c.5280
T V P M L L A K S R F S G E G K N W S S p.1760
. . . | 42 . . . g.147154
CTAATAAATCTGCACTGTCAGCTTGAGCTAGAA | GTGCATTATTATAATGAAATGTTTGGT c.5340
L I N L H C Q L E L E | V H Y Y N E M F G p.1780
. . . . . . g.147214
GTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGG c.5400
V W E P L L E P L E I D Q T E D F R P W p.1800
. | 43 . . . . . g.148769
AATCTTGGTATCAAG | ATGAAAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATCCTGAA c.5460
N L G I K | M K K K A K M A I V E S D P E p.1820
. . . . . . g.148829
GAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATCAGTTTCCATTCAAAAGACCAA c.5520
E E N Y K V P E Y K T V I S F H S K D Q p.1840
. . . . . | 44 . g.149052
TTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAG | GCATTT c.5580
L N I T L S K C G L V M L N N L V K | A F p.1860
. . . . . . g.149112
ACAGAAGCTGCCACTGGATCTTCAGCTGACTTCGTAAAGGATCTAGCACCATTTATGATT c.5640
T E A A T G S S A D F V K D L A P F M I p.1880
. . . . . . g.149172
TTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGTGATTCTTTTAGTGTACTCAAC c.5700
L N S L G L T I S V S P S D S F S V L N p.1900
. . . . . . g.149232
ATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATC c.5760
I P M A K S Y V L K N G E S L S M D Y I p.1920
. . . . . . g.149292
CGAACCAAGGACAATGATCATTTCAATGCAATGACCAGCCTAAGCAGCAAACTCTTCTTC c.5820
R T K D N D H F N A M T S L S S K L F F p.1940
. | 45 . . . . . g.150672
ATTCTTCTTA | CACCTGTTAACCATTCTACTGCTGATAAGATTCCTTTAACAAAAGTGGGA c.5880
I L L T | P V N H S T A D K I P L T K V G p.1960
. . . . . . g.150732
CGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAA c.5940
R R L Y T V R H R E S G V E R S I V C Q p.1980
. . . . . | 46 . g.159574
ATTGATACAGTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAGTGCAG | ATAAGAAAT c.6000
I D T V E G S K K V T I R S P V Q | I R N p.2000
. . . . . . g.159634
CATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACCTTATTGGGAACTGCCTCACCT c.6060
H F S V P L S V Y E G D T L L G T A S P p.2020
. . . | 47 . . . g.164835
GAAAATGAATTCAACATACCATTAGGATCTTACCG | ATCATTCATTTTTCTGAAGCCAGAA c.6120
E N E F N I P L G S Y R | S F I F L K P E p.2040
. . . . . . g.164895
GATGAGAACTATCAAATGTGTGAAGGAATTGACTTTGAAGAGATTATAAAAAATGATGGT c.6180
D E N Y Q M C E G I D F E E I I K N D G p.2060
. . . . . . g.164955
GCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCTAAGGAATCATTTCTCATTAAT c.6240
A L L K K K C R S K N P S K E S F L I N p.2080
. . . . . . g.165015
ATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGAT c.6300
I V P E K D N L T S L S V Y S E D G W D p.2100
. . . . . . g.165075
TTACCATACATAATGCATTTGTGGCCACCTATCCTGCTCCGAAATCTTCTTCCTTACAAA c.6360
L P Y I M H L W P P I L L R N L L P Y K p.2120
. | 48 . . . . g.167113
ATTGCTTATTATATAGAG | GGAATTGAAAATTCGGTTTTTACTCTAAGTGAAGGACATTCA c.6420
I A Y Y I E | G I E N S V F T L S E G H S p.2140
. . . . . . g.167173
GCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTAT c.6480
A Q I C T A Q L G K A R L H L K L L D Y p.2160
. . . . . . g.167233
CTCAATCACGATTGGAAAAGTGAATATCACATAAAGCCTAATCAGCAAGACATTAGTTTT c.6540
L N H D W K S E Y H I K P N Q Q D I S F p.2180
. . . . . . g.167293
GTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGATTTAGATATTGCTGTCCATATG c.6600
V S F T C V T E M E K T D L D I A V H M p.2200
. . . . . . g.167353
ACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAA c.6660
T Y N T G Q T V V A F H S P Y W M V N K p.2220
. . . . . . g.167413
ACTGGCCGCATGTTACAGTACAAAGCAGACGGAATTCATCGAAAGCATCCACCTAATTAT c.6720
T G R M L Q Y K A D G I H R K H P P N Y p.2240
. . . . . | 49 . g.167739
AAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTTTTTAATAACAATAAG | GTTCAA c.6780
K K P V L F S F Q P N H F F N N N K | V Q p.2260
. . . . . . g.167799
CTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCAT c.6840
L M V T D S E L S N Q F S I D T V G S H p.2280
. . . | 50 . . g.167980
GGAGCTGTTAAATGTAAAGGCCTGAAAATGGACTATCAA | GTTGGTGTCACTATAGACCTG c.6900
G A V K C K G L K M D Y Q | V G V T I D L p.2300
. . . . . . g.168040
AGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCTTTTTATATGATTAAAAACAAA c.6960
S S F N I T R I V T F T P F Y M I K N K p.2320
. . . . . . g.168100
AGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTG c.7020
S K Y H I S V A E E G N D K W L S L D L p.2340
| 51 . . . . . . g.171762
GAGCAG | TGTATCCCCTTTTGGCCTGAGTATGCTTCTAGTAAACTTCTTATTCAAGTCGAA c.7080
E Q | C I P F W P E Y A S S K L L I Q V E p.2360
. . . . . . g.171822
AGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAGCAGGAAAATTGTATTCTATTG c.7140
R S E D P P K R I Y F N K Q E N C I L L p.2380
. | 52 . . . . . g.172609
CGTCTAGATAACGAG | CTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACA c.7200
R L D N E | L G G I I A E V N L A E H S T p.2400
. . . . . . g.172669
GTTATTACATTTTTAGATTATCATGATGGAGCAGCTACATTCCTCTTAATAAATCACACA c.7260
V I T F L D Y H D G A A T F L L I N H T p.2420
. . | 53 . . . g.178903
AAGAATGAACTTGTTCAATACAATCAAAG | TTCTCTCAGTGAAATAGAAGATTCCCTCCCT c.7320
K N E L V Q Y N Q S | S L S E I E D S L P p.2440
. . . . . . g.178963
CCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGG c.7380
P G K A V F Y T W A D P V G S R R L K W p.2460
. . . | 54 . . g.180985
AGATGTAGAAAAAGCCATGGTGAAGTAACACAGAAGGAT | GATATGATGATGCCTATAGAT c.7440
R C R K S H G E V T Q K D | D M M M P I D p.2480
. . . . . . g.181045
TTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAAGGTTTACAACGCATTATTTTA c.7500
L G E K T I Y L V S F F E G L Q R I I L p.2500
. . . . . . g.181105
TTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCA c.7560
F T E D P R V F K V T Y E S E K A E L A p.2520
. . . . . . g.181165
GAGCAAGAAATTGCAGTGGCATTACAAGATGTTGGAATTTCTCTTGTCAACAATTACACG c.7620
E Q E I A V A L Q D V G I S L V N N Y T p.2540
. . . | 55 . . . g.184297
AAGCAAGAAGTAGCCTATATAGGCATTACAAG | TTCTGATGTGGTTTGGGAAACAAAGCCC c.7680
K Q E V A Y I G I T S | S D V V W E T K P p.2560
. . . . . . g.184357
AAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAA c.7740
K K K A R W K P M S V K H T E K L E R E p.2580
. . . . . . g.184417
TTTAAGGAATATACTGAATCTTCTCCTTCAGAAGATAAGGTTATTCAGTTGGACACTAAT c.7800
F K E Y T E S S P S E D K V I Q L D T N p.2600
| 56 . . . . . . g.185301
GTTCCG | GTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAATA c.7860
V P | V R L T P T G H N M K I L Q P H V I p.2620
. . . . . . g.185361
GCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAA c.7920
A L R R N Y L P A L K V E Y N T S A H Q p.2640
. . . | 57 . . . g.185939
TCATCATTTAGAATTCAGATTTACAGAATACAG | ATCCAAAATCAGATACATGGTGCTGTA c.7980
S S F R I Q I Y R I Q | I Q N Q I H G A V p.2660
. . . . . | 58 . g.186893
TTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATGGATTCAG | CACCA c.8040
F P F V F Y P V K P P K S V T M D S A | P p.2680
. . . . . . g.186953
AAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGT c.8100
K P F T D V S I V M R S A G H S Q I S R p.2700
| 59 . . . . . . g.188146
ATTAA | GTATTTCAAAGTATTGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGTTTATC c.8160
I K | Y F K V L I Q E M D L R L D L G F I p.2720
. . . . . | 60 . g.193024
TATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACTGAAAATACAGAG | GTTGAGCTT c.8220
Y A L T D L M T E A E V T E N T E | V E L p.2740
. . . . . . g.193084
TTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAA c.8280
F H K D I E A F K E E Y K T A S L V D Q p.2760
. . . . | 61 . . g.194297
TCACAAGTCAGCCTCTATGAATATTTTCATATATCTCCTATCAAG | TTACATTTAAGTGTT c.8340
S Q V S L Y E Y F H I S P I K | L H L S V p.2780
. . . . . . g.194357
TCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAACAAAATGGAGGACTGATTCCA c.8400
S L S S G R E E A K D S K Q N G G L I P p.2800
. . . . . . g.194417
GTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGAT c.8460
V H S L N L L L K S I G A T L T D V Q D p.2820
. | 62 . . . . . g.195659
GTAGTTTTTAA | GCTTGCATTTTTTGAACTCAACTATCAGTTCCATACAACATCCGATCTA c.8520
V V F K | L A F F E L N Y Q F H T T S D L p.2840
. . . | 63 . . . g.196881
CAGTCTGAAGTCATAAGACACTATTCAAAACAG | GCCATTAAGCAGATGTATGTACTCATT c.8580
Q S E V I R H Y S K Q | A I K Q M Y V L I p.2860
. . . . . . g.196941
CTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTA c.8640
L G L D V L G N P F G L I R E F S E G V p.2880
. . | 64. . . . g.197845
GAAGCATTTTTTTATGAACCTTACCAG | GGAGCCATCCAGGGTCCTGAAGAGTTTGTGGAA c.8700
E A F F Y E P Y Q | G A I Q G P E E F V E p.2900
. . . . | 65 . . g.197987
GGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCTGTTG | GTGGATTGGCTGGTGCT c.8760
G M A L G L K A L V G G A V G | G L A G A p.2920
. . . . . . g.198047
GCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGAC c.8820
A S K I T G A M A K G V A A M T M D E D p.2940
. . . . . . g.198107
TACCAACAGAAGAGAAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAAGGCATC c.8880
Y Q Q K R R E A M N K Q P A G F R E G I p.2960
. . | 66. . . . g.198478
ACTCGTGGAGGAAAAGGCTTAGTTTCT | GGATTTGTTAGTGGCATAACAGGAATTGTTACA c.8940
T R G G K G L V S | G F V S G I T G I V T p.2980
. | 67 . . . . . g.198628
AAACCAATCAAAG | GAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAA c.9000
K P I K G | A Q K G G A A G F F K G V G K p.3000
. . . . . . g.198688
GGTTTAGTAGGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGCTAGCAGTACA c.9060
G L V G A V A R P T G G I I D M A S S T p.3020
. | 68. . . . . g.209574
TTTCAGGGAATAAAAAG | AGCTACAGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGG c.9120
F Q G I K R | A T E T S E V E S L R P P R p.3040
. . . . . . g.209634
TTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAA c.9180
F F N E D G V I R P Y R L R D G T G N Q p.3060
| 69 . . . . . g.230842
ATGTTACAG | GTCATGGAAAATGGAAGATTTGCAAAATACAAATATTTTACCCATGTCATG c.9240
M L Q | V M E N G R F A K Y K Y F T H V M p.3080
. . . | 70 . . . g.233444
ATCAATAAGACAGATATGCTAATGATAACCAGACG | TGGTGTATTGTTTGTAACAAAGGGA c.9300
I N K T D M L M I T R R | G V L F V T K G p.3100
. . . . . . g.233504
ACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCA c.9360
T F G Q L T C E W Q Y S F D E F T K E P p.3120
. . . | 71 . . g.235109
TTCATTGTTCATGGGAGAAGATTGCGCATTGAAGCAAAG | GAACGAGTGAAGTCTGTATTT c.9420
F I V H G R R L R I E A K | E R V K S V F p.3140
. . . . . | 72 . g.243517
CATGCCAGAGAGTTTGGAAAAATAATTAACTTCAAGACCCCAGAGGATGCCAGG | TGGATC c.9480
H A R E F G K I I N F K T P E D A R | W I p.3160
. . . . g.243562
CTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGA c.9525
L T K L Q E A R E P S P S L X p.3174
. . . . . . g.243622
cagagaacactgcctgaagacacacagcaataagtgattacagctcctagactaccttcc c.*60
. . . . . . g.243682
aaaacctgtttgggaagcatattacagaaatgatttcaagtaccctgtattctggatgct c.*120
. . . . . . g.243742
aaaaaacaaaaacaaacaaaaaaacaaaaacaaaaaaacaaaaccagaatcaggtaaaac c.*180
. . . . . . g.243802
agctatgtgattaaaatattttaattcttcagcaattacccggttttctaaattgaatca c.*240
. . . . . . g.243862
tgcatctatttataattctaattattttgtaaaagaagacaaaattatgaatcttaagta c.*300
. . . . . . g.243922
tttgctccatctttttctctgtaatggtggagaggctgcccataattcatctccacatgg c.*360
. . . . . . g.243982
agccaagtttaatgtttctagttcacattttgtacttctgtcatgcttatttcaaactcc c.*420
. . . . . . g.244042
ctgagtgatgggtaagaaatcaaacattgcctcagtggtatcaagagaactttggtggtg c.*480
. . . . . . g.244102
gtttcttcagaatcatgaagttcttttgccagataaatattttgatattattttcctttt c.*540
. . . . . . g.244162
taatataaaggataggtttgaattgtacttaaaatgcatagcattattaaaaacaatctt c.*600
. . . . . . g.244222
ttaaaatataatttataacatagattgaagcctccccttaagaaaccttaaagaaataag c.*660
. . . . . . g.244282
tatcctactcaaaaaaggaagtctgtttcagaactttagggcctttgaaatatttcctca c.*720
. . . . . . g.244342
agcctatttcatgagatctacttggtttacccaagtcatgtttttaatagactgctaata c.*780
. . . . . . g.244402
tcaaaggagaatttttaaagccttaacaatgcctactttccattcactgttaacatggaa c.*840
. . . . . . g.244462
taaacacaattcccaacatcttagatagtgtattatgcttccaacagacagtccctctca c.*900
. . . . . . g.244522
tataaagtttatgtaccctaaaatctaacccaataacctgtcccgttgccaatagattga c.*960
. . . . . . g.244582
gaatttctggtttgcttactctacagttattcaaatgagagtcacgcttttaaatttaca c.*1020
. . . . . . g.244642
gctcatcacagaaatcatcagctatacattagtaaaaataaggacatgaggttttctttc c.*1080
. . . . . . g.244702
ttggtttttgtccaagatctttgcaccttaatattaatggactgtttcaggtaaaagaga c.*1140
. . . . . . g.244762
atgaatgtatgattgtgaactgtgaagagaatgatgcaggatcctatttagttactgaat c.*1200
. . . . . . g.244822
aatacagagtattcaatgcatgttgtatgtgccaccaagttactattaactgtttttgga c.*1260
. . . . . . g.244882
attgaagactctgtatagtcaatagttgtgaaattcttctcaggctccttaaaccctcgc c.*1320
. . . . . . g.244942
tttgttgtaaaagctaaaataaacagcatgctatattgtaattgtatttcttgctgacca c.*1380
. . . . . . g.245002
aatctactaaatgctattgatttctctctgattactaaaacacattgtttattctcagta c.*1440
. . . g.245039
gtttcccccaaaatgcttttttctttgctgaacttaa c.*1477
(downstream sequence)
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