visual system homeobox 1 (VSX1) - upstream reference sequence


                                                 g.1            g.3
                                                 c.-5283 gaa    c.-5281

.         .         .         .         .         .             g.63
taccacagactgcgtaattcataaacaatacaggtttatttggctcatggtttggagact    c.-5221

.         .         .         .         .         .             g.123
gggaagaagttcaaggtcaagggaccacatcaggtgagggccttcttgctgccacatcac    c.-5161

.         .         .         .         .         .             g.183
atggtggaaggtgtcacatggtgagagaggaagagcagaagagggggcgggaaggggcca    c.-5101

.         .         .         .         .         .             g.243
aactcatgtgcccactcccatggtcactaacccactctcacgataactaacccattccca    c.-5041

.         .         .         .         .         .             g.303
caataactaacccactcctgcaacaatggtattgatccactcctcagggcagagccctcc    c.-4981

.         .         .         .         .         .             g.363
tgacctaatcactccctaaagcctccacctctcaacactgttgcattggcgattaaggca    c.-4921

.         .         .         .         .         .             g.423
caacacacgaacttcagggcacacagtcaaatcagagcaggcaaaggaaagaagatgcca    c.-4861

.         .         .         .         .         .             g.483
ctttgagagggtttgaagagagatgcagggcagcaagacacccacagtcagagttaggcc    c.-4801

.         .         .         .         .         .             g.543
gtgagctgacactgcttgtattcaaatcctgtctttgccactggatagtgagtgaccttg    c.-4741

.         .         .         .         .         .             g.603
ggcaatttatgcaattatttaatcacttgaaattttcacttcctcatctgaagcatgtgg    c.-4681

.         .         .         .         .         .             g.663
acaataatattatctacccatagagctgtggtcaggatgaaatgtggccattgtgataag    c.-4621

.         .         .         .         .         .             g.723
gtgtttataataatagctgccccccagtaagaagccaagagaggttggccatcttcatca    c.-4561

.         .         .         .         .         .             g.783
ctttcagtcgtgggaggagagcctgtggggagagtgagggcctgaggatgacactcgatt    c.-4501

.         .         .         .         .         .             g.843
ctgtgtgggccccggggtggaggaagaggagacctggggaggtgcaggctgcaggggagg    c.-4441

.         .         .         .         .         .             g.903
ctgctgtgttcagctctgggtgtgttgcatttcagtgccccgggagactggttcagacat    c.-4381

.         .         .         .         .         .             g.963
gcaggagtacattgagacaacagcctgggcttcaagagtggggtccagattggagaagat    c.-4321

.         .         .         .         .         .             g.1023
tccagagatctgggcagggagatggtgattgccccgtggggttccacctgagaagaaaga    c.-4261

.         .         .         .         .         .             g.1083
agggctctgtagactttgagctgagcattccaggaacacccaggtaaaagcgagatggag    c.-4201

.         .         .         .         .         .             g.1143
acaggaagtgtctgagctcaggtggctagaagcagagccagggacagggtctgggcgcct    c.-4141

.         .         .         .         .         .             g.1203
gagagatattgagacaaggtctcaggaatgaggggccaagatggggtgggaacaagctga    c.-4081

.         .         .         .         .         .             g.1263
gcaaggagctgacttggtctgatccatgaagggagagggtcttgtagcagaaacgcctct    c.-4021

.         .         .         .         .         .             g.1323
gcagagctgtcctttgaaacgagaggagaggcctcctatcatccctctgtcagttgatga    c.-3961

.         .         .         .         .         .             g.1383
cacagtgtgtgtgtttgtcagggggtggggggctctggattaaggggcttttgtcagcca    c.-3901

.         .         .         .         .         .             g.1443
agggcaattcttcctattcgagggccccacactcacaacagctggaagaaggtgcgacag    c.-3841

.         .         .         .         .         .             g.1503
ttctggaaagggggtctgggtaggcacaacagcatttagatacgaggcaatatggaatgc    c.-3781

.         .         .         .         .         .             g.1563
aatcatcagcaagtaactaaagctcctcctgcttggatctctgggaggcggagtagaagg    c.-3721

.         .         .         .         .         .             g.1623
cacctctaagagtcactctgtgcaggggtgtgtttgtgtgtgtgtagcggggggtgctta    c.-3661

.         .         .         .         .         .             g.1683
cattgcaattcccgtcagtgtttggtgtcgcatttctccacgtgttaattattggcacct    c.-3601

.         .         .         .         .         .             g.1743
ttagctagtgggcagagtgagctctgaaggtcgagaaaagtccccaggtaaagatgtggc    c.-3541

.         .         .         .         .         .             g.1803
gggcactggaggctgggcaggcgtgcagttggaggggtcaggctggaggtgggtggggcc    c.-3481

.         .         .         .         .         .             g.1863
aaacagcctctgccacaacttttttttttttttttttttttggagacggagtttcactct    c.-3421

.         .         .         .         .         .             g.1923
tgttgcccaggctggagtgcaatggctctatctcagctcaccgcaacctccgccttctag    c.-3361

.         .         .         .         .         .             g.1983
gttcaaacgattcttctgtctcagcctccctagtagctggggttacaggcatgcatcacc    c.-3301

.         .         .         .         .         .             g.2043
atgcccggctaattttgtatttttagtagagacagggtttctccattttggtcaggctgg    c.-3241

.         .         .         .         .         .             g.2103
tcttgaactcctgaccttgtgatccgcccgcctcgccctcccaaagtgctgagattacag    c.-3181

.         .         .         .         .         .             g.2163
gcgtgagccactgtgcccggacttttaactgaagacacaaaagcatccgagatggagcag    c.-3121

.         .         .         .         .         .             g.2223
ccagaggtgggaggaaaatcagaagaacggagccgtggggggtcatttctgcagactcac    c.-3061

.         .         .         .         .         .             g.2283
agggcgatccgtttcaccttctcggggcatcccaccccattgtgtctgagcactttatcg    c.-3001

.         .         .         .         .         .             g.2343
cgccagcctggccagccgcggctctgagaagcccaagaggggtgcctgctgagccactca    c.-2941

.         .         .         .         .         .             g.2403
cagcaggtccaacctcagcctggcgctgccaaggcacattcgcggtcggcgacagagggg    c.-2881

.         .         .         .         .         .             g.2463
ctggaaatcttccttagaaaataatgagctgaggaacctttattcattagttaaatcccg    c.-2821

.         .         .         .         .         .             g.2523
ggtaatcctggctgatgaagacagattcggaaccctcaacggatttagggacccaaaacg    c.-2761

.         .         .         .         .         .             g.2583
actcctgggggccgcccggggcgggaacgttcgcgggagctgcgcctctggcaatagatt    c.-2701

.         .         .         .         .         .             g.2643
tgcaggtggtatccggtagggggaagctggaaggagcccattcttttggccgccaggacg    c.-2641

.         .         .         .         .         .             g.2703
cggaggcttcccctaaacgcggcccgtaggtttggcaactgcgagggcaccccggggaca    c.-2581

.         .         .         .         .         .             g.2763
cgaggattgtgggtggatcgtgggctagctttttatctcttgcagacgtctcctaaacgg    c.-2521

.         .         .         .         .         .             g.2823
caagaagcgcttccctggtcttggctgacgctgagtgaagcgcccgtataacttgacgct    c.-2461

.         .         .         .         .         .             g.2883
gggctctgggtggatccccaccacatagggcgcgcaagtggataccagagccccggcaac    c.-2401

.         .         .         .         .         .             g.2943
agcggggacacagatgagcgcagcgtcgggtggggggcgtttctcactgtaggaggctat    c.-2341

.         .         .         .         .         .             g.3003
gaaaatgtcctcccgcgctgggctcctgccaccgccacgctgcgaaacacaaggtgaccc    c.-2281

.         .         .         .         .         .             g.3063
aggacacaactcgcccaccgctggggtcctgcaggcccctccctggcattggggtcccgg    c.-2221

.         .         .         .         .         .             g.3123
gatgcattaggaacgccccagtccaggaattgcaagaccccttagaagttcgttccttct    c.-2161

.         .         .         .         .         .             g.3183
gcatctctgagtccccttagagctccaatacgggctccttgattgagtctcctgctctgt    c.-2101

.         .         .         .         .         .             g.3243
gtcgccctcgccacgtctctgtgtccgatgtgactgggttaataagtcccagttgctctc    c.-2041

.         .         .         .         .         .             g.3303
acctgcaaaatgagtttaagacgatccttcccgaggcgccgcggtcactatagagagtgt    c.-1981

.         .         .         .         .         .             g.3363
ctgaggctgggctcctaccgcctggccttttggtgtctttggatcactggctatctactc    c.-1921

.         .         .         .         .         .             g.3423
ggggtctgtcactcccgtgatcgcctaccttccagggagacctaggggagggagacccca    c.-1861

.         .         .         .         .         .             g.3483
agacctgtcccaggtgaggccacttggtcggcacccggggctgcaggcacggcgcccgcg    c.-1801

.         .         .         .         .         .             g.3543
tccgccctcgccccttaggctttccattcgcgggcgaccccggtcgggccaccttagaat    c.-1741

.         .         .         .         .         .             g.3603
cgactaccctgcctgcctgactggtctcgggctacaaactgtgtggaagcgtaggtatct    c.-1681

.         .         .         .         .         .             g.3663
cacttaactgctaccccaaattcggatttacaaacgactacgcagtcccgaatgcccaac    c.-1621

.         .         .         .         .         .             g.3723
gccttccctaaacccagagataaatctgggggaaaattcctcgcggagcggaaaacaacg    c.-1561

.         .         .         .         .         .             g.3783
ccagcgtctaaagcgttctgccccgagctggagtggttcaaaagacaatgatctcaaaag    c.-1501

.         .         .         .         .         .             g.3843
aaagtgattgttttggtaatcccgggaacagcttgcaagggggagatttgggtcttcctt    c.-1441

.         .         .         .         .         .             g.3903
tagtaacggaaagtcaatgcgcagcctcctgtaattatccttatcggaagccccttgttt    c.-1381

.         .         .         .         .         .             g.3963
aatctgcatgtttagcggaggccccactcgaacgcgcagcgagtgggagacccactttgc    c.-1321

.         .         .         .         .         .             g.4023
agggcccaggctcgggctccggtccctgcgtgcgcgcaggcagccgcgccgggttcccgc    c.-1261

.         .         .         .         .         .             g.4083
ggagctcaggcgtttgctcctccctcgctgcgggacctcggactgtaggaccctcaggga    c.-1201

.         .         .         .         .         .             g.4143
gtgggactgaggagatctgcttccggggttctgggattgggaagcgggggacgcagggct    c.-1141

.         .         .         .         .         .             g.4203
ccgagcgatgagggctggttgggttcaaagcgcgaaccagtagttacttacccacgtgct    c.-1081

.         .         .         .         .         .             g.4263
tggggccaactttagcgaatatcagagtttcactgattattcaaagaatcaggctttctt    c.-1021

.         .         .         .         .         .             g.4323
tgaataatcgtgaaattggacaataaattgtaagccccgatgaaaaggtgtgctttccag    c.-961

.         .         .         .         .         .             g.4383
tagacagactctattttatttcaatttacctccctccactcctccccaatttagggttgc    c.-901

.         .         .         .         .         .             g.4443
tggataaaatactgatacatactcctacaaaaaaaaaaagccctccttttttatctgaaa    c.-841

.         .         .         .         .         .             g.4503
tcacatttcactgagccgacagtgttttgttggttaaacctggtaccctgcccgtctcag    c.-781

.         .         .         .         .         .             g.4563
ccccgggcagtccactcctctctctgcttctctccctttccccagctcttgtgagtctgc    c.-721

.         .         .         .         .         .             g.4623
caccccctacagttcagcccgtggagtgttggggatggacctgggggtggatttggatgg    c.-661

.         .         .         .         .         .             g.4683
aggtagaatgaccatggattaaagggatggaggtaggatgaccatggattaaatacacgg    c.-601

.         .         .         .         .         .             g.4743
ttttcattcctttccccttggggattttcagagaaggccttcttacaggaaggccttcgt    c.-541

.         .         .         .         .         .             g.4803
ggcaccggcggcggaggtggagggctggctggggacatatatggggtagccatcggggtg    c.-481

.         .         .         .         .         .             g.4863
tggttgggaatggggtcctaggtcttaataggcagttgggtcgcatcaaagaagcttcag    c.-421

.         .         .         .         .         .             g.4923
ggcagctgggagtggggcctccacccagagagtctggaaggaaggagaaggccacgccag    c.-361

.         .         .         .         .         .             g.4983
gatgtagaacttgcgacttttcgagggacaggcagacagcggagtcactgtcccttacct    c.-301

.         .            .         .         .         .          g.5043
tctttcctcccctccct \ cctagaatgggggtggggtggggtggggtgggctggacagaag c.-241


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