(used for variant description)
(last modified March 9, 2018)
This file was created to facilitate the description of sequence variants on transcript NM_025160.6 in the WDR26 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_047198.1, covering WDR26 transcript NM_025160.6.
(upstream sequence)
. g.5014
cggagggagtagga c.-181
. . . . . . g.5074
gagcccggggcttcggcaggcagagcaggcctctcccctccgtcctcgtcgtcctcgtcc c.-121
. . . . . . g.5134
tcctcctcctcctcctcctccgtggtggtagtggtgggacttcccccggctgctgcccct c.-61
. . . . . . g.5194
cccgccgccgctgctgtcccccaccgaagtagcggccacagcctggtcagcggcagcatc c.-1
. . . . . . g.5254
ATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGAGGTGGCGGCGGCGGCGGTGGAGGAGGA c.60
M Q A N G A G G G G G G G G G G G G G G p.20
. . . . . . g.5314
GGGGGCGGCGGGGGCCAGGGACAGACCCCGGAACTCGCCTGCTTGTCGGCCCAGAACGGG c.120
G G G G G Q G Q T P E L A C L S A Q N G p.40
. . . . . . g.5374
GAGTCGTCCCCCTCGTCGTCGTCGTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCTG c.180
E S S P S S S S S A G D L A H A N G L L p.60
. . . . . . g.5434
CCTTCCGCCCCCTCCGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAATAACGGGGTT c.240
P S A P S A A S N N S N S L N V N N G V p.80
. . . . . . g.5494
CCCGGCGGGGCGGCCGCCGCATCCTCAGCCACCGTCGCAGCTGCCTCCGCCACCACCGCC c.300
P G G A A A A S S A T V A A A S A T T A p.100
. . . . . . g.5554
GCCTCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGCCTCAAGAAGAAGAAGCGGCTC c.360
A S S S L A T P E L G S S L K K K K R L p.120
. . . . . . g.5614
TCCCAGTCAGATGAGGATGTCATTAGGCTAATAGGACAGCACTTGAATGGCTTAGGGCTC c.420
S Q S D E D V I R L I G Q H L N G L G L p.140
| 02 . . . . . . g.7576
AA | CCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAACATCCTTCTGCT c.480
N | Q T V D L L M Q E S G C R L E H P S A p.160
. . . . | 03 . . g.7736
ACCAAATTCCGAAATCATGTCATGGAAGGAGACTGGGATAAG | GCAGAAAATGACCTGAAT c.540
T K F R N H V M E G D W D K | A E N D L N p.180
. . . . . . g.7796
GAACTAAAGCCTTTAGTGCATTCTCCTCATGCTATTGTGGTAAGAGGCGCACTTGAAATC c.600
E L K P L V H S P H A I V V R G A L E I p.200
. . | 04. . . . g.14678
TCTCAAACGTTGTTGGGAATAATTGTG | AGGATGAAGTTTTTGCTGCTGCAGCAGAAGTAC c.660
S Q T L L G I I V | R M K F L L L Q Q K Y p.220
. . . . . . g.14738
CTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGAATTG c.720
L E Y L E D G K V L E A L Q V L R C E L p.240
. . . . | 05 . . g.19700
ACGCCGCTGAAATACAATACAGAGCGCATTCATGTTCTTAGTGG | GTATCTGATGTGTAGC c.780
T P L K Y N T E R I H V L S G | Y L M C S p.260
. . . . . . g.19760
CATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCGATCT c.840
H A E D L R A K A E W E G K G T A S R S p.280
. . | 06 . . . . g.20921
AAACTATTGGATAAACTTCAGA | CCTATTTACCACCATCAGTGATGCTTCCCCCACGGCGT c.900
K L L D K L Q T | Y L P P S V M L P P R R p.300
. . . . . . g.20981
TTACAGACTCTCCTGCGGCAGGCGGTGGAACTACAAAGGGATCGGTGCCTATATCACAAT c.960
L Q T L L R Q A V E L Q R D R C L Y H N p.320
. . . . . | 07 g.27735
ACCAAACTTGATAATAATCTAGATTCTGTGTCTCTGCTTATAGACCATGTTTGTAGTAG | G c.1020
T K L D N N L D S V S L L I D H V C S R | p.340
. . . . . . g.27795
AGGCAGTTCCCATGTTATACGCAGCAGATACTTACGGAGCATTGTAATGAAGTGTGGTTC c.1080
R Q F P C Y T Q Q I L T E H C N E V W F p.360
. . . . . . g.27855
TGTAAATTCTCTAATGATGGCACTAAACTAGCAACAGGATCAAAAGATACAACAGTTATC c.1140
C K F S N D G T K L A T G S K D T T V I p.380
. | 08 . . . . g.34771
ATATGGCAAGTTGATCCG | GATACACACCTGCTAAAACTGCTTAAAACATTAGAAGGACAT c.1200
I W Q V D P | D T H L L K L L K T L E G H p.400
. . . . . . g.34831
GCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTTGCTTGTGGC c.1260
A Y G V S Y I A W S P D D N Y L V A C G p.420
. . . | 09 . . g.38251
CCAGATGACTGCTCTGAGCTTTGGCTTTGGAATGTACAA | ACAGGAGAACTAAGGACAAAA c.1320
P D D C S E L W L W N V Q | T G E L R T K p.440
. . . . . . g.38311
ATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGC c.1380
M S Q S H E D S L T S V A W N P D G K R p.460
. . . | 10 . . g.40286
TTTGTGACTGGAGGTCAGCGTGGGCAGTTCTATCAGTGT | GACTTAGATGGTAATCTCCTT c.1440
F V T G G Q R G Q F Y Q C | D L D G N L L p.480
. . . . . . g.40346
GACTCCTGGGAAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAGACTGTT c.1500
D S W E G V R V Q C L W C L S D G K T V p.500
. . . . . . g.40406
CTGGCATCAGATACACACCAGCGAATTCGGGGCTATAACTTCGAGGACCTTACAGATAGG c.1560
L A S D T H Q R I R G Y N F E D L T D R p.520
| 11 . . . . . . g.40761
AACAT | AGTACAAGAAGATCATCCTATTATGTCTTTTACTATTTCAAAAAATGGCCGATTA c.1620
N I | V Q E D H P I M S F T I S K N G R L p.540
. . | 12 . . . . g.41109
GCTTTGTTAAATGTAGCAACTCAG | GGAGTTCATTTATGGGACTTGCAAGACAGAGTTTTA c.1680
A L L N V A T Q | G V H L W D L Q D R V L p.560
. . . . . . g.41169
GTAAGAAAGTATCAAGGTGTTACACAAGGGTTTTATACAATTCATTCATGTTTTGGAGGC c.1740
V R K Y Q G V T Q G F Y T I H S C F G G p.580
. . . | 13 . . . g.45312
CATAATGAAGACTTCATCGCTAGTGGCAGTGAAG | ATCACAAGGTTTACATCTGGCACAAA c.1800
H N E D F I A S G S E D | H K V Y I W H K p.600
. . . . . . g.45372
CGTAGTGAACTGCCAATTGCGGAGCTGACAGGGCACACACGTACAGTAAACTGTGTGAGC c.1860
R S E L P I A E L T G H T R T V N C V S p.620
. . . . . . g.45432
TGGAACCCACAGATTCCATCCATGATGGCCAGCGCCTCAGATGATGGCACTGTTAGAATA c.1920
W N P Q I P S M M A S A S D D G T V R I p.640
. . . . | 14 . . g.49459
TGGGGACCAGCACCTTTTATAGACCACCAGAATATTGAAG | AGGAATGCAGTAGCATGGAT c.1980
W G P A P F I D H Q N I E E | E C S S M D p.660
g.49465
AGTTGA c.1986
S X p.661
. . . . . . g.49525
tggtgaatttggagcagacgacttctgtttaacttaaaattagtcgtattttaatggctt c.*60
. . . . . . g.49585
gggatttggtgcaaacaaacatgattgatagctggacagacatgctcgtcatgaaaaaag c.*120
. . . . . . g.49645
aaccatttctgaagcccgattggggccaaacatttacaccttgcttcatagtaaccagtt c.*180
. . . . . . g.49705
gagatgaagcacgtcgttagaacgttgttggacaccatgttgaattattcccccatcggt c.*240
. . . . . . g.49765
tgtgaagaactgtgctacattcaggcttacccattgaactcagtatatatatttttttcc c.*300
. . . . . . g.49825
ttcctgtcttttgtctggcaggataccattcttgttgctcttctgtgtaatgaagtttaa c.*360
. . . . . . g.49885
atgcttgtttggaaaactttatttaacagtttagaaggcttgatagaaagagtgcattag c.*420
. . . . . . g.49945
tctgaagagtatacattggataggaaagaatttccttcttttgtttctccaaatctttcc c.*480
. . . . . . g.50005
gccttatttagcttgagatctttgcagcttggttcatggattctagccttgcccgttgcg c.*540
. . . . . . g.50065
cagtatatactgatccagatgataaaccagtgaactatgtcaaaagcactctcaatatta c.*600
. . . . . . g.50125
catttgacaaaaagttttgtacttttcacatagcttgttgccccgtaaaagggttaacag c.*660
. . . . . . g.50185
cacaattttttaaaaataaattaagaagtatttataggattaaagtgacttcatttgtat c.*720
. . . . . . g.50245
acatttggaatctaaaccagcttaaaaacagtttcctcaatgacttagatacacagtata c.*780
. . . . . . g.50305
actgatgctcttctggaataccacatgagacatggtcagaaacagtgcttggaaggacat c.*840
. . . . . . g.50365
tacacaagaaattcagagtaatgctttgaagatttccccccttttgttttattcctgaag c.*900
. . . . . . g.50425
gaacatcagtacccgatcttgaagaaattcaagattcaaaaagaattttaaatacaccaa c.*960
. . . . . . g.50485
catgagacatcagtagtcagttggttttcagtaaagcttgttccaagttgttctcaactt c.*1020
. . . . . . g.50545
aggaagtaattttggtgtgatctagcaaaagagtaggaatcagcgatacaaccactttgg c.*1080
. . . . . . g.50605
aagtttatagtataattgaaattattagaagaattcagcaggttacagacatacttaaac c.*1140
. . . . . . g.50665
tgggattaaaacctcatagtcatttttcttaattgcccttaatattttgacatataggga c.*1200
. . . . . . g.50725
tacataaatttaaagaatattttttctcagttttttcagatattgccatactgaacctca c.*1260
. . . . . . g.50785
ttctaaactggtgctgtggatagtctttccctctcccctcctgttttagtttaaggaaag c.*1320
. . . . . . g.50845
gtttccttcatggaaaagcacttttaattttgagaatttcacatttaaaataagccaaaa c.*1380
. . . . . . g.50905
gcctgatgttcacattgtgcttttaaactccgtaacagctgaatacaacataacatagtc c.*1440
. . . . . . g.50965
tcccttgaaattccctccctttttcagtagaggataaatagggtgactccagctgttgga c.*1500
. . . . . . g.51025
atgagaatggggatacccccaaaataagattctggtgaagaaaaagtcttgtactaagtt c.*1560
. . . . . . g.51085
cccctttaggtgtagccaagtctataatataattatgatcatgaatagactccagaatcc c.*1620
. . . . . . g.51145
acaaagagaagagggcttggatgtcaaaaattcttccattgtggggtaggtggtcgggga c.*1680
. . . . . . g.51205
tgggagaaagggaaaagtcagggaaggggagaagaaagaaaaacacatttggccttaaaa c.*1740
. . . . . . g.51265
tagcatgcattctcccagaagcccatagtaaagaaaatgacagatcgtggtcagcagact c.*1800
. . . . . . g.51325
cttatcaaattggtatgtaaaagatttcttcaagctccattttgcagagaccaccactta c.*1860
. . . . . . g.51385
gagaatcaaaaaattcctgttttgatacttctaagttaaaatatatgttacagtttatct c.*1920
. . . . . . g.51445
ggtacttcatttttcttaactaaaattactttttactttaagcttgaataaaaatcttca c.*1980
. . . . . . g.51505
ttggtaactgtatgtaattaagtggcaacttctctttacctcagtatagttaaaaaccat c.*2040
. . . . . . g.51565
tcatattttaagtgattcatgtataccctgaagccgttaatacaccccagtctctatggt c.*2100
. . . . . . g.51625
aacatcactaaatgtgggcatagaaactccacagctgtttacaaatttggttacagtgtg c.*2160
. . . . . . g.51685
ctacggtgcatttgtaacactcagatttgtgcccattcaggggcaatttggcactcagat c.*2220
. . . . . . g.51745
tctactctacttcacctaaccacccctagatctgagttttcagagtgcttctgaagtaca c.*2280
. . . . . . g.51805
gtttaaaaacactttttaaaaagtggagtaaaagtgaggcacattttacaagaacataac c.*2340
. . . . . . g.51865
tcctattaaaacggagtaacaactatgcaaaggtttctatagcagctaggtgagtttgtt c.*2400
. . . . . . g.51925
ttccgggtctgtcttaactggcagcttcctgtacatactggtacttatttgctgtaaacg c.*2460
. . . . . . g.51985
tctgtttcatacatttgccatgcagtgactgtgctcgaaaggtgaaatcaatggtaaaga c.*2520
. . . . . . g.52045
agcctaggattttatggtatgagaaactgatcgcaggattttctgatccatagctattaa c.*2580
. . . . . . g.52105
ttgaaaacttctgatagtgctgtaggctctatagtaggcttaagagtgagtcttatacta c.*2640
. . . . . . g.52165
tgaagccagccacaagatactaacaaatgtataaattgaaaagtaccaatactttttgca c.*2700
. . . . . . g.52225
catagatcaaaatagagtggagaatttgggctccaaaaatcaggttagtaggctcatttc c.*2760
. . . . . . g.52285
catgtgcttaaaaatgtttttgttgttatgcattgattaagggctagagcaaatataaaa c.*2820
. . . . . . g.52345
ttaaatgtctttttcctccaaataattggttattaatggtaaaatgttggacttggggat c.*2880
. . . . . . g.52405
tactgagattagtatgtgggtagtaaagaattggagtgggagttagtggggagggatgac c.*2940
. . . . . . g.52465
aaagcttcagctttggtttttgtatttttttagtcttcataacagctacatttctgttgc c.*3000
. . . . . . g.52525
tcttattggccagataaatgtgttatattaaaccaggtaagtattttaaacagagaacat c.*3060
. . . . . . g.52585
tttatttgcatatatccctacaaattggcccattttattgggtggggggataaaaaaggg c.*3120
. . . . . . g.52645
attccctaactttaaataatcagaatatcctgcaattgaaaggagaaaaaaatccaattt c.*3180
. . . . . . g.52705
tgtcagtattttcttagtctgaaaaaaacagcagtagtaatctggtgaatgttattatta c.*3240
. . . . . . g.52765
ggagtgttctgcctctacagtggcatattccatgacattaatagaaaacccttctttccc c.*3300
. . . . . . g.52825
acccctccccatcttgacattttcttttttaggatgttggttcctgcaaacaagaactga c.*3360
. . . . . . g.52885
ccctatcacctctgcctcacagtgggtaaatatatcatacatctcttgaaagggaaaata c.*3420
. . . . . . g.52945
tccatgtcagtttctttcacagtagaagaatggctgcttttgaatggggaggaaagaaga c.*3480
. . . . . . g.53005
catttttcttaatatcctttttgtcccatctctaaaatgtataaatattttgatttggtt c.*3540
. . . . . . g.53065
ttactttaatttctcattcataatttcgcaactgtccttttgggttgccctccaacacat c.*3600
. . . . . . g.53125
tacttccatttcagaaaccatatctgatttaatataaactgctaacttaagaagaggtga c.*3660
. . . . . . g.53185
atttgcatttacacttagacactttctaaaaacagggtgaacttaattgaaatttttcag c.*3720
. . . . . . g.53245
tgttgttaagctattgttatagtagctgccctatagttacaaaaataaaaactataaaaa c.*3780
. . . . . . g.53305
cccatcccctatctacttaatccagatagcctggatttaacaaaaccaatagtataaaaa c.*3840
. . . . . . g.53365
tgtgtgtgtgtgttctgtgtgtgtgtgagagagagagtacttgattcattaaaaagtcct c.*3900
. . . . . . g.53425
ggaaacagctgttctaggatcttgtcatttttactgaaagtctcgtgcacatgtgaagtg c.*3960
. . . . . . g.53485
ccctctgagtttaaggtttggttaatactggtatatttttataagattgaaattgtgtcc c.*4020
. . . . . . g.53545
ccatctttaacttaaacattttcattatcagggtcaatgtgctagaactgaattgtaaca c.*4080
. . . . . . g.53605
tttttaggcacagatggaaaaaaatgttattggctccttgaaaatgtgtgtgtgtggcga c.*4140
. . . . . . g.53665
ggggaatagatccacaaaagcatgtatgtacttacaaaccaagctgtagagatcaagaaa c.*4200
. . . . . . g.53725
agaacttaagtgttgatctcaagatttctaaattgtcaagatttacatggcattgtggtg c.*4260
. . . . . . g.53785
gaactagttaacacttagagcttttggtatgtaataactatttgctatggactgattaaa c.*4320
. . . . . . g.53845
tgtttcaaaagattgtgttcttcaattttggtgggttttgatttttgtttttttaactgc c.*4380
. . . . . . g.53905
ctctcagattatatttacttagtttaaatttctttgctttattcattaaagtataaaaac c.*4440
. . . . . . g.53965
ttcaggtctctgatatttattttcacttgtttactaattatttacaaaacaccctttgtt c.*4500
. . . . . . g.54025
gacttttattttataaatgtgtaatgtattaaacgtctttaaatttttgttcaactgaaa c.*4560
. . . . . . g.54085
ctacattaactttgatttgctttactgggatttttttttaaagacactttttccatgtca c.*4620
. . . . . . g.54145
gtgcgcagcacttaaccagtcgtttgtattccctttctttcaatccaataaacagaatga c.*4680
. g.54157
atacctaaataa c.*4692
(downstream sequence)
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