(used for variant description)
(last modified May 24, 2019)
This file was created to facilitate the description of sequence variants on transcript NM_003394.3 in the WNT10B gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_023347.1, covering WNT10B transcript NM_003394.3.
(upstream sequence)
. . g.5024
gcgcgcgcgcgcgcgcgcgctggg c.-421
. . . . . . g.5084
aggagggggaggctgcattcgcctggtcaaggctgggagtggagggtagggtggggaagc c.-361
. . . . . . g.5144
cccaggctcggggaggggctgcagctccgtcagcccggcagagccaccctgagctcggtg c.-301
. . . . . . g.5204
agagcaaagccagagcccccagtcctttgctcgccggcttgctagctctctcgatcactc c.-241
. . . . . . g.5264
cctcccttcctccctcccttcctcccggcggccgcggcggcgctggggaagcggtgaaga c.-181
. . . . . . g.5324
ggagtggcccggccctggaagaatgcggctctgacaaggggacagaacccagcgcagtct c.-121
. . . . . . g.5384
ccccacggtttaagcagcactagtgaagcccaggcaacccaaccgtgcctgtctcggacc c.-61
. . | 02 . . . g.6329
ccgcacccaaaccactggag | gtcctgatcgatctgcccaccggagcctccgggcttcgac c.-1
. . . . . . g.6389
ATGCTGGAGGAGCCCCGGCCGCGGCCTCCGCCCTCGGGCCTCGCGGGTCTCCTGTTCCTG c.60
M L E E P R P R P P P S G L A G L L F L p.20
. | 03 . . . . . g.6553
GCGTTGTGCAGTCG | GGCTCTAAGCAATGAGATTCTGGGCCTGAAGTTGCCTGGCGAGCCG c.120
A L C S R | A L S N E I L G L K L P G E P p.40
. . . . . . g.6613
CCGCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGC c.180
P L T A N T V C L T L S G L S K R Q L G p.60
. . . . . . g.6673
CTGTGCCTGCGCAACCCCGACGTGACGGCGTCCGCGCTTCAGGGTCTGCACATCGCGGTC c.240
L C L R N P D V T A S A L Q G L H I A V p.80
. . . . . . g.6733
CACGAGTGTCAGCACCAGCTGCGCGACCAGCGCTGGAACTGCTCCGCGCTTGAGGGCGGC c.300
H E C Q H Q L R D Q R W N C S A L E G G p.100
. . . | 04. . . g.8562
GGCCGCCTGCCGCACCACAGCGCCATCCTCAAGCGCG | GTTTCCGAGAAAGTGCTTTTTCC c.360
G R L P H H S A I L K R G | F R E S A F S p.120
. . . . . . g.8622
TTCTCCATGCTGGCTGCTGGGGTCATGCACGCAGTAGCCACGGCCTGCAGCCTGGGCAAG c.420
F S M L A A G V M H A V A T A C S L G K p.140
. . . . . . g.8682
CTGGTGAGCTGTGGCTGTGGCTGGAAGGGCAGTGGTGAGCAGGATCGGCTGAGGGCCAAA c.480
L V S C G C G W K G S G E Q D R L R A K p.160
. . . . . . g.8742
CTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTCTCTGCCCAGCCCT c.540
L L Q L Q A L S R G K S F P H S L P S P p.180
. . . . . . g.8802
GGCCCTGGCTCAAGCCCCAGCCCTGGCCCCCAGGACACATGGGAATGGGGTGGCTGTAAC c.600
G P G S S P S P G P Q D T W E W G G C N p.200
. . . . . . g.8862
CATGACATGGACTTTGGAGAGAAGTTCTCTCGGGATTTCTTGGATTCCAGGGAAGCTCCC c.660
H D M D F G E K F S R D F L D S R E A P p.220
. . . . . | 05 . g.10314
CGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAG | GTGGTAACT c.720
R D I Q A R M R I H N N R V G R Q | V V T p.240
. . . . . . g.10374
GAAAACCTGAAGCGGAAATGCAAGTGTCATGGCACATCAGGCAGCTGCCAGTTCAAGACA c.780
E N L K R K C K C H G T S G S C Q F K T p.260
. . . . . . g.10434
TGCTGGAGGGCGGCCCCAGAGTTCCGGGCAGTGGGGGCGGCGTTGAGGGAGCGGCTGGGC c.840
C W R A A P E F R A V G A A L R E R L G p.280
. . . . . . g.10494
CGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGT c.900
R A I F I D T H N R N S G A F Q P R L R p.300
. . . . . . g.10554
CCCCGTCGCCTCTCAGGAGAGCTGGTCTACTTTGAGAAGTCTCCTGACTTCTGTGAGCGA c.960
P R R L S G E L V Y F E K S P D F C E R p.320
. . . . . . g.10614
GACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTG c.1020
D P T M G S P G T R G R A C N K T S R L p.340
. . . . . . g.10674
TTGGATGGCTGTGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGA c.1080
L D G C G S L C C G R G H N V L R Q T R p.360
. . . . . . g.10734
GTTGAGCGCTGCCATTGCCGCTTCCACTGGTGCTGCTATGTGCTGTGTGATGAGTGCAAG c.1140
V E R C H C R F H W C C Y V L C D E C K p.380
. . . g.10764
GTTACAGAGTGGGTGAATGTGTGTAAGTGA c.1170
V T E W V N V C K X p.389
. . . . . . g.10824
gggtcagccttaccttggggctggggaagaggactgtgtgagaggggcgccttttcagcc c.*60
. . . . . . g.10884
ctttgctctgatttccttccaaggtcactcttggtccctggaagcttaaagtatctacct c.*120
. . . . . . g.10944
ggaaacagctttaggggtggtgggggtcaggtggactctgggatgtgtagccttctcccc c.*180
. . . . . . g.11004
aacaattggagggtcttgaggggaagctgccacccctcttctgctccttagacacctgaa c.*240
. . . . . . g.11064
tggactaagatgaaatgcactgtattgctcctcccacttctcaactccagagccccttta c.*300
. . . . . . g.11124
accctgattcatactccttttggctggggagtccctatagtttcaccactcctctccctt c.*360
. . . . . . g.11184
gagggataaccccaggcactgtttggagccataagatctgtatctagaaagagatcaccc c.*420
. . . . . . g.11244
actcctatgtactatccccaaactcctttactgcagcctgggctccctcttgtgggataa c.*480
. . . . . . g.11304
tgggagacagtggtagagaggtttttcttgggaaagagacagagtgctgaggggcactct c.*540
. . . . . . g.11364
cccctgaatcctcagagagttgtctgtccaggcccttagggaagttgtctccttccattc c.*600
. . . . . . g.11424
agatgttaatggggaccctccaaaggaaggggttttcccatgactcttggagcctctttt c.*660
. . . . . . g.11484
tccttcttcagcaggaagggtgggaagggataatttatcatactgagacttgttcttggt c.*720
. . . g.11519
tcctgtttgaaactaaaataaattaagttactgga c.*755
(downstream sequence)
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