(used for variant description)
(last modified August 3, 2017)
This file was created to facilitate the description of sequence variants on transcript NM_205768.2 in the ZBTB18 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_033841.1, covering ZBTB18 transcript NM_205768.2.
(upstream sequence)
. . . . . g.7373
attctaacacacagacagggagttagtgtgtgcggatctgtggtggagaaggt c.-121
. . . . . . g.7433
atctcattcctctctaacatcatctccactttgcatctgtctctcttagtctgctttttt c.-61
. . . . . . g.7493
tccaccgatgtaacagacctggagccagcaggactcagaggaaaggacttaatcaggttt c.-1
. | 02 . . . . . g.9896
ATGTGTCCTAAAG | GTTATGAAGACAGTATGGAGTTTCCAGACCATAGTAGACATTTGCTA c.60
M C P K G | Y E D S M E F P D H S R H L L p.20
. . . . . . g.9956
CAGTGTCTGAGCGAGCAGAGACACCAGGGTTTTCTTTGTGACTGCACTGTTCTGGTGGGA c.120
Q C L S E Q R H Q G F L C D C T V L V G p.40
. . . . . . g.10016
GATGCCCAGTTCCGAGCGCACCGAGCTGTACTGGCTTCATGCAGCATGTATTTCCACCTC c.180
D A Q F R A H R A V L A S C S M Y F H L p.60
. . . . . . g.10076
TTTTACAAGGACCAGCTGGACAAAAGAGACATTGTTCATCTGAACAGCGACATTGTTACA c.240
F Y K D Q L D K R D I V H L N S D I V T p.80
. . . . . . g.10136
GCCCCCGCTTTCGCTCTCCTGCTTGAATTCATGTATGAAGGGAAACTCCAGTTCAAAGAC c.300
A P A F A L L L E F M Y E G K L Q F K D p.100
. . . . . . g.10196
TTGCCCATTGAAGACGTGCTAGCAGCTGCCAGTTATCTCCACATGTATGACATTGTCAAA c.360
L P I E D V L A A A S Y L H M Y D I V K p.120
. . . . . . g.10256
GTCTGCAAAAAGAAGCTGAAAGAGAAAGCCACCACGGAGGCAGACAGCACCAAAAAGGAA c.420
V C K K K L K E K A T T E A D S T K K E p.140
. . . . . . g.10316
GAAGATGCTTCAAGTTGTTCGGACAAAGTCGAGAGTCTCTCCGATGGCAGCAGCCACATA c.480
E D A S S C S D K V E S L S D G S S H I p.160
. . . . . . g.10376
GCAGGCGATTTGCCCAGTGATGAAGATGAAGGAGAAGATGAAAAATTGAACATCCTGCCC c.540
A G D L P S D E D E G E D E K L N I L P p.180
. . . . . . g.10436
AGCAAAAGGGACTTGGCGGCCGAGCCTGGGAACATGTGGATGCGATTGCCCTCAGACTCA c.600
S K R D L A A E P G N M W M R L P S D S p.200
. . . . . . g.10496
GCAGGCATCCCCCAGGCTGGCGGAGAGGCAGAGCCACACGCCACAGCAGCTGGAAAAACA c.660
A G I P Q A G G E A E P H A T A A G K T p.220
. . . . . . g.10556
GTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTCCGTGAGG c.720
V A S P C S S T E S L S Q R S V T S V R p.240
. . . . . . g.10616
GATTCGGCAGATGTTGACTGTGTGCTGGACCTGTCTGTCAAGTCCAGCCTTTCAGGAGTT c.780
D S A D V D C V L D L S V K S S L S G V p.260
. . . . . . g.10676
GAAAATCTGAACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGAAGCAACCTGGTGCAG c.840
E N L N S S Y F S S Q D V L R S N L V Q p.280
. . . . . . g.10736
GTGAAGGTGGAGAAAGAGGCTTCCTGTGATGAGAGTGATGTTGGCACTAATGACTATGAC c.900
V K V E K E A S C D E S D V G T N D Y D p.300
. . . . . . g.10796
ATGGAACATAGCACTGTGAAAGAAAGTGTGAGCACTAATAACAGGGTACAGTATGAGCCG c.960
M E H S T V K E S V S T N N R V Q Y E P p.320
. . . . . . g.10856
GCCCATCTGGCTCCCCTGAGGGAGGACTCGGTCTTGAGGGAGCTGGACCGGGAGGACAAA c.1020
A H L A P L R E D S V L R E L D R E D K p.340
. . . . . . g.10916
GCCAGTGATGATGAGATGATGACCCCAGAGAGCGAGCGTGTCCAGGTGGAGGGAGGCATG c.1080
A S D D E M M T P E S E R V Q V E G G M p.360
. . . . . . g.10976
GAGAGCAGTCTGCTCCCCTACGTCTCCAACATCCTGAGCCCCGCGGGCCAGATCTTCATG c.1140
E S S L L P Y V S N I L S P A G Q I F M p.380
. . . . . . g.11036
TGCCCCCTGTGCAACAAGGTCTTCCCCAGCCCCCACATCCTGCAGATCCACCTGAGCACG c.1200
C P L C N K V F P S P H I L Q I H L S T p.400
. . . . . . g.11096
CACTTCCGCGAGCAGGACGGCATCCGCAGCAAGCCCGCCGCCGATGTCAACGTGCCCACG c.1260
H F R E Q D G I R S K P A A D V N V P T p.420
. . . . . . g.11156
TGCTCGCTGTGTGGGAAGACTTTCTCTTGCATGTACACCCTCAAGCGCCACGAGAGGACT c.1320
C S L C G K T F S C M Y T L K R H E R T p.440
. . . . . . g.11216
CACTCGGGGGAGAAGCCCTACACATGCACCCAGTGCGGCAAGAGCTTCCAGTACTCGCAC c.1380
H S G E K P Y T C T Q C G K S F Q Y S H p.460
. . . . . . g.11276
AACCTGAGCCGCCATGCCGTGGTGCACACCCGCGAGAAGCCGCACGCCTGCAAGTGGTGC c.1440
N L S R H A V V H T R E K P H A C K W C p.480
. . . . . . g.11336
GAGCGCAGGTTCACGCAGTCCGGGGACCTGTACAGACACATTCGCAAGTTCCACTGTGAG c.1500
E R R F T Q S G D L Y R H I R K F H C E p.500
. . . . . . g.11396
TTGGTGAACTCCTTGTCGGTCAAAAGCGAAGCACTGAGCTTGCCTACTGTCAGAGACTGG c.1560
L V N S L S V K S E A L S L P T V R D W p.520
. . . g.11432
ACCTTAGAAGATAGCTCTCAAGAACTTTGGAAATAA c.1596
T L E D S S Q E L W K X p.531
. . . . . . g.11492
ttttatatatatataaataatatatatatatatacatatatataaatagatctctatata c.*60
. . . . . . g.11552
gttgtggtacggtctaaaagcagtcttgtttcctggaaataaaaagttgggatattaact c.*120
. . . . . . g.11612
tgtttttgcactttagaatagcatgagaatctcactaatttagcattctgataaaagaaa c.*180
. . . . . . g.11672
ctttagagcaagtcagaatagagaggtgtttttcctttgaggggataggggaagtaagcc c.*240
. . . . . . g.11732
aataagaaccttttaaacaaatcgtcctgtcacaaaatgctttcatatggcttaattttg c.*300
. . . . . . g.11792
tcaacactgcattgtcttttgagctcttttttcccccccaacaaagtttttttgtttttt c.*360
. . . . . . g.11852
gtttttttttttaagtagaaattccctccagttttattagcctctttatatgtctcaaat c.*420
. . . . . . g.11912
tgcatgaattttttctggctgttggaaacctgaatgcttttagacccaaatggaaaattt c.*480
. . . . . . g.11972
ctgaaatgctggattatctatttttaaacaagcagttgacttaaaactttctgtggcaac c.*540
. . . . . . g.12032
ttctggttttctgacagttcccagtgagagaaatgctgaaagtacactgggatcactggg c.*600
. . . . . . g.12092
acactgtcttatgaaggtttgcttgggatgaaaaaggatattgcagcttcagcagtgttg c.*660
. . . . . . g.12152
aactgtgtgtttaaaaatgtgaattactgttattgtatactgtaattgattacatgggct c.*720
. . . . . . g.12212
gggggggtgtcaaagaacttgacaggttgtgttgatgctcttagttgagtcttgaaaagt c.*780
. . . . . . g.12272
aaatattaacgctacagaaatgcatgagtttcaatatattttttgtctttgtttgcattg c.*840
. . . . . . g.12332
tataactttaacgagtgagtttaaaattatttaatttccttagaaaaatagcaccatttg c.*900
. . . . . . g.12392
gaaaaaaaaactggtgttatgaagaacgtaaatgcactgtttttatttttattttatata c.*960
. . . . . . g.12452
atttaaattgactttcccactgtctttaagttgaaactgttaagctgaataaaaacttaa c.*1020
. . . . . . g.12512
gctgcaaattgataacttcgctacataacaaggaaaatataaatgtttacaaacagctta c.*1080
. . . . . . g.12572
aagatttgcatgtgcagtgtgcatttataacaaacttctaattgcacaaaacccatgcca c.*1140
. . . . . . g.12632
gctcagagtttaggtgtacacatttacccagttgagcgttcttagaataactactgcaca c.*1200
. . . . . . g.12692
agttgacaataggtcgttctctctttttttttgtttgctccctttttctttttctcccct c.*1260
. . . . . . g.12752
tcctccttaccctccctcccttactctccccccccaccaccaccctccacccccaactca c.*1320
. . . . . . g.12812
tgaaaagattctatggactgaaaaagccccaggctgaaaggactggactgccttgattga c.*1380
. . . . . . g.12872
catggggaagggggttagtagactatgtggattgcggcagcagaggctgcagcctaacgt c.*1440
. . . . . . g.12932
gtggttttaatgaccagcacgcaaggcaaaagcattttgcacagtgtttgttttcctgtc c.*1500
. . . . . . g.12992
ttgcacttacaaataaggtctatgggagtagcatggaaaacgtttgctgtttttcccttt c.*1560
. . . . . . g.13052
tttttttaattgcttttgtttaaaatttgatcgccttaactactgtaaacatagcctatt c.*1620
. . . . . . g.13112
tttgtgcttaagatactgaatggaaaactccattgtgtgttgctggactgttttggaaat c.*1680
. . . . . . g.13172
atttggttaaatgtgtgttaatttggctgtaatggcatttaaagcaaacaaacaaacaaa c.*1740
. . . . . . g.13232
aaaagctgtgaaaatggccttggagcattatctttagttacttgaagagtttctagtttt c.*1800
. . . . . . g.13292
tttaaaatacagtttatgttaaaataatttttattaatttagagaagacaatcaatgtct c.*1860
. . . . . . g.13352
gtgagaaaacggactttcttttggattttctttttgtggtcattgtgagtgattgctttt c.*1920
. . . . . . g.13412
tccttttcttagtttcacattcttcctttgttctaaaacttagactgacatctagctttg c.*1980
. . . . . . g.13472
acaatcatagtatgttttattttcctgagggggaataacttataatgctgtttagttttg c.*2040
. . . . . . g.13532
tactattggtgtgttggtgaatttttaaactgtgtgctaactgcaataaattatatgaac c.*2100
g.13538
tgagaa c.*2106
(downstream sequence)
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