(used for variant description)
(last modified May 21, 2015)
This file was created to facilitate the description of sequence variants on transcript NM_014797.2 in the ZBTB24 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_029388.1, covering ZBTB24 transcript NM_014797.2.
(upstream sequence)
. . . . g.5048
cgcgcttccgggttggctgtggctgtggctgcggcggcggcgcaggag c.-121
. . . . . . g.5108
cagaaaccggtgcggcgcagaagccccagaggcgggcggggcggagcggagggccagcgg c.-61
. . . . | 02 . . g.6211
gccccggcgtgggtctcccgccaggccgccgg | atttaacccttagtggcttctgaagaaa c.-1
. . . . . . g.6271
ATGGCAGAAACATCGCCAGAGCCTTCTGGGCAGCTTGTTGTACACTCAGACGCTCACAGT c.60
M A E T S P E P S G Q L V V H S D A H S p.20
. . . . . . g.6331
GACACTGTGCTGGCCAGTTTTGAGGATCAGAGGAAGAAAGGCTTCCTCTGTGACATTACT c.120
D T V L A S F E D Q R K K G F L C D I T p.40
. . . . . . g.6391
TTAATCGTGGAGAATGTACATTTCCGGGCCCACAAAGCCTTACTTGCTGCCAGTAGTGAA c.180
L I V E N V H F R A H K A L L A A S S E p.60
. . . . . . g.6451
TACTTCTCAATGATGTTTGCAGAAGAGGGGGAAATCGGCCAATCCATTTATATGCTGGAA c.240
Y F S M M F A E E G E I G Q S I Y M L E p.80
. . . . . . g.6511
GGCATGGTTGCAGACACCTTTGGTATCCTGCTGGAATTTATCTACACAGGTTATCTCCAT c.300
G M V A D T F G I L L E F I Y T G Y L H p.100
. . . . . . g.6571
GCCAGTGAGAAAAGTACAGAACAAATCCTGGCTACTGCTCAGTTCTTAAAAGTCTATGAC c.360
A S E K S T E Q I L A T A Q F L K V Y D p.120
. . . . . . g.6631
CTGGTAAAGGCTTACACAGACTTCCAAAATAATCATAGCTCCCCAAAGCCAACAACTTTG c.420
L V K A Y T D F Q N N H S S P K P T T L p.140
. . . . . . g.6691
AACACTGCTGGTGCCCCAGTGGTTGTTATCTCTAATAAGAAAAACGATCCTCCAAAGCGG c.480
N T A G A P V V V I S N K K N D P P K R p.160
. . . . . . g.6751
AAACGGGGAAGACCAAAAAAAGTCAATACATTGCAGGAGGAGAAATCAGAACTGGCTGCA c.540
K R G R P K K V N T L Q E E K S E L A A p.180
. . . . . . g.6811
GAGGAAGAAATACAGTTAAGAGTGAACAATTCAGTTCAGAATAGACAAAACTTTGTGGTT c.600
E E E I Q L R V N N S V Q N R Q N F V V p.200
. . . . . . g.6871
AAAGGAGACAGTGGTGTACTGAATGAGCAAATTGCAGCAAAAGAAAAGGAAGAATCGGAG c.660
K G D S G V L N E Q I A A K E K E E S E p.220
. . . . . . g.6931
CCTACTTGTGAGCCAAGTAGAGAGGAGGAAATGCCAGTTGAAAAAGATGAGAACTATGAT c.720
P T C E P S R E E E M P V E K D E N Y D p.240
. . . . . . g.6991
CCCAAGACCGAGGATGGCCAGGCAAGCCAGAGTCGATACAGCAAGCGGAGGATTTGGAGA c.780
P K T E D G Q A S Q S R Y S K R R I W R p.260
. . . . . . g.7051
TCCGTCAAACTTAAAGATTACAAACTTGTTGGGGATCAAGAGGACCATGGTTCAGCCAAG c.840
S V K L K D Y K L V G D Q E D H G S A K p.280
. . . . . . g.7111
AGGATCTGTGGAAGGAGAAAGCGCCCTGGAGGCCCTGAGGCCCGCTGTAAAGACTGTGGC c.900
R I C G R R K R P G G P E A R C K D C G p.300
. . . . . | 03 . g.11315
AAGGTCTTTAAGTACAATCACTTTTTAGCAATCCACCAGAGGAGCCACACAG | GGGAGCGA c.960
K V F K Y N H F L A I H Q R S H T G | E R p.320
. . . . . . g.11375
CCTTTCAAATGTAATGAGTGTGGAAAAGGCTTTGCCCAGAAGCACTCGCTACAGGTCCAC c.1020
P F K C N E C G K G F A Q K H S L Q V H p.340
. . . . . . g.11435
ACCAGGATGCACACAGGCGAGCGGCCGTACACCTGCACCGTGTGCAGCAAGGCTCTGACC c.1080
T R M H T G E R P Y T C T V C S K A L T p.360
. . . . | 04 . . g.11999
ACCAAGCACTCACTGCTGGAGCACATGAGCCTGCACTCAG | GACAGAAGTCTTTTACCTGT c.1140
T K H S L L E H M S L H S G | Q K S F T C p.380
. . . . . . g.12059
GATCAATGCGGAAAATATTTCAGCCAGAACAGACAGCTAAAGAGCCATTACCGAGTTCAT c.1200
D Q C G K Y F S Q N R Q L K S H Y R V H p.400
| 05 . . . . . . g.12811
ACAG | GCCACTCATTACCGGAATGCAAAGACTGCCATCGCAAATTCATGGATGTGTCTCAG c.1260
T G | H S L P E C K D C H R K F M D V S Q p.420
. . | 06 . . . g.20535
CTAAAGAAACATCTGCGAACACACACAG | GTGAGAAGCCATTTACTTGTGAAATCTGTGGC c.1320
L K K H L R T H T G | E K P F T C E I C G p.440
. . . . . | 07 . g.21673
AAATCTTTCACAGCAAAGAGTTCTCTTCAGACCCACATCAGAATCCATCG | AGGAGAAAAG c.1380
K S F T A K S S L Q T H I R I H R | G E K p.460
. . . . . . g.21733
CCATACTCCTGTGGCATTTGTGGCAAATCCTTCTCTGACTCCAGTGCCAAAAGGAGACAC c.1440
P Y S C G I C G K S F S D S S A K R R H p.480
. . . . . . g.21793
TGCATTCTACACACTGGCAAGAAGCCTTTCTCCTGCCCTGAGTGTAACTTACAGTTTGCT c.1500
C I L H T G K K P F S C P E C N L Q F A p.500
. . . . . . g.21853
CGCTTAGACAACTTGAAGGCTCACTTGAAAATTCATAGCAAGGAGAAGCATGCTTCAGAT c.1560
R L D N L K A H L K I H S K E K H A S D p.520
. . . . . . g.21913
GCCAGCAGCATTTCTGGCAGTAGTAATACAGAAGAGGTCAGGAATATTCTTCAGCTACAG c.1620
A S S I S G S S N T E E V R N I L Q L Q p.540
. . . . . . g.21973
CCATATCAACTCTCTACCTCGGGAGAGCAGGAAATTCAGCTTCTCGTAACCGATTCTGTA c.1680
P Y Q L S T S G E Q E I Q L L V T D S V p.560
. . . . . . g.22033
CATAACATCAATTTCATGCCCGGTCCTAGCCAGGGAATCAGCATTGTGACTGCAGAGAGT c.1740
H N I N F M P G P S Q G I S I V T A E S p.580
. . . . . . g.22093
TCCCAAAACATGACTGCAGACCAGGCTGCTAATCTTACCCTGCTCACGCAGCAGCCAGAG c.1800
S Q N M T A D Q A A N L T L L T Q Q P E p.600
. . . . . . g.22153
CAACTGCAGAATTTAATTCTTTCAGCTCAACAGGAGCAAACAGAACACATTCAGAGCCTC c.1860
Q L Q N L I L S A Q Q E Q T E H I Q S L p.620
. . . . . . g.22213
AATATGATTGAAAGCCAGATGGGGCCCTCACAAACAGAGCCAGTGCACGTGATCACTCTG c.1920
N M I E S Q M G P S Q T E P V H V I T L p.640
. . . . . . g.22273
TCCAAGGAAACACTGGAACATCTTCATGCCCATCAAGAGCAAACAGAGGAGCTCCATTTA c.1980
S K E T L E H L H A H Q E Q T E E L H L p.660
. . . . . . g.22333
GCTACAAGTACTTCAGATCCAGCTCAGCACCTGCAGCTGACACAGGAGCCTGGTCCGCCA c.2040
A T S T S D P A Q H L Q L T Q E P G P P p.680
. . . . . g.22387
CCACCCACTCACCACGTGCCCCAGCCAACGCCACTTGGCCAGGAGCAGAGCTGA c.2094
P P T H H V P Q P T P L G Q E Q S X p.697
. . . . . . g.22447
cctgtaaacacgtttgactgcttgattgggctcttcttataagccagctctgactggatt c.*60
. . . . . . g.22507
ttgaacgcttgaaatcaggctctccacaccattgacttgcagatgcttctgtgagagctg c.*120
. . . . . . g.22567
tgatggctaactgatgtttataatgccctccatccaggtagcaagatgtgtgtatgtctt c.*180
. . . . . . g.22627
gtctaaggtactgatttgtattgagcatttcaatattattgaatggttttcattttaatc c.*240
. . . . . . g.22687
tgcaatgtctcataaagactcgggtagtttttctttgggggcattgatctcagtttttct c.*300
. . . . . . g.22747
gtaaggtttaaatgttcacagccataggttatggtcttgccaacctccccagttatgttt c.*360
. . . . . . g.22807
ttttgttttctaggacaaagggagtcattttggttgaactgggcagaatggtttgttcta c.*420
. . . . . . g.22867
ttttcttatttttcttaggcaacacagttgttaccacaagacaagtcagggctaaatatg c.*480
. . . . . . g.22927
acagatcacaatgtatggggaatttgcccttttaataatttccagtcccctaagacaaag c.*540
. . . . . . g.22987
taaccctcaacgttttatctttatgcagtacagtgggcttattgtgttaacacttcagaa c.*600
. . . . . . g.23047
agattcaaactcataaactcagtattttaactcaaaattcatgtaacaagatagccaaaa c.*660
. . . . . . g.23107
gcataggatttcttaaaattctgaattcgtcttttctgagaaacataaatttacatattt c.*720
. . . . . . g.23167
ttcaacagaaggctatcaaaattttaattaagtttaaaatacaaaattggatcaagacat c.*780
. . . . . . g.23227
tcaccctaaattctgaatttttgtcagaaaagagatttgattttcatgaaggtaaagctt c.*840
. . . . . . g.23287
tcttcactattctggaacataaaactttattcagtgtaatttaagtcttatatatactct c.*900
. . . . . . g.23347
actgaattctaactgatctcctgaaaatgttgatctacgtgttgtgtctgataactttct c.*960
. . . . . . g.23407
ggagatggaagcttataattcatttttattgcagactagttaaatcccacaaagtgaata c.*1020
. . . . . . g.23467
tcttctcctaatctttccttttttagagacagggtctcactgtatcacccaggccagagt c.*1080
. . . . . . g.23527
gtagtggcacaatcattgctcactgtaacctcgaattcctgggctcaagcaaccctccca c.*1140
. . . . . . g.23587
ccttagcctccctagtagctgggactacagggatgtaccaccacacccagctaatcttca c.*1200
. . . . . . g.23647
tctaatcttaaaactttgagcctcagagactttgtagccagcatgtgtctgtaattgtat c.*1260
. . . . . . g.23707
gatttttaaatcatcatcaaaagattaaattatgtttgggttaggttttcaagctaagct c.*1320
. . . . . . g.23767
tattgaattcttttaccactttcatgtaagctggtaggggatttttgagaaaagaaggtg c.*1380
. . . . . . g.23827
ggcactagtatatctaaattaacaatgctgatggggagtagggggtaatctactctaaaa c.*1440
. . . . . . g.23887
ttaatagagcctttccatcaattgttttgttttagacatccttgatttctccctaaatca c.*1500
. . . . . . g.23947
aataagttatttggaggttagagtaatagagaattcttcaggtttgagagaagataaaaa c.*1560
. . . . . . g.24007
cattttggttgcatatttgctaagctatattttattatatgtaattcacaaaacttccaa c.*1620
. . . . . . g.24067
aatgatatatatcttatatgtatcaaccaaactaatgttaaatcaggcctgactagagca c.*1680
. . . . . . g.24127
aagataacaattttttacaaacactgttaagccctaagtattatttcaggttctcgttta c.*1740
. . . . . . g.24187
aactgtttaattttattcttaaaacacaaagtttttaccaacttttcaaagcccaccaat c.*1800
. . . . . . g.24247
ccacattttctccaggaaattaaatatttaagtaagtgagtgtttactcactctggatag c.*1860
. . . . . . g.24307
ctaggtgattattcagaaaatacggttacatagctatttataagtcaagtttcactggct c.*1920
. . . . . . g.24367
ctataacagtctacctctacactaagagaactataacatgaacaacataggtcactttaa c.*1980
. . . . . . g.24427
atgttctagtagcaacttttaaaaacataaaaagaagcaggtgaaaatgttaataaaagt c.*2040
. . . . . . g.24487
ttatttaatccaacatttgccaaatatttcaacatataaaaatatattagtgagacattt c.*2100
. . . . . . g.24547
tacattctctttttcatactaagctttcgaaatctggtgtgtattttacactttctgcac c.*2160
. . . . . . g.24607
atctccatttggatgctaatgttcattggacatacttgatctgtatttagatttcataca c.*2220
. . . . . . g.24667
acttacagttgaaaacagattctcatatcaagtagctaagacaaaagtttttttcaagaa c.*2280
. . . . . . g.24727
ttgaaataagtatcagtttaaaaatttatattaaatttattaaaattaaaatccagttcc c.*2340
. . . . . . g.24787
ttgttgcatgggacacagtgcaaatgcttgataagcacatgtggctagtggctgctatat c.*2400
. . . . . . g.24847
tggacagcatgggccacctgtttctaacttgagcatcagtcctagctatgcctgaattat c.*2460
. . . . . . g.24907
ttgaccagctgtcaaagagaaacaaggaaatgatagctttgttaatctagcctctttctt c.*2520
. . . . . . g.24967
tgtcccacatatacattctacccctttgaataaaaaagttcaatgacgccgggcgtggag c.*2580
. . . . . . g.25027
gctcatgcctgtaatcccagcactttgggaggccaaggtgggcggatcacgaggtcagga c.*2640
. . . . . . g.25087
gttcgagggcagcctgaccaacatagtgaaaccccatctctactaaaaatacaaaaatta c.*2700
. . . . . . g.25147
gctgggcgtggtggtgtacccctgtaatcccagctactcgggaggctgagacaggagaat c.*2760
. . . . . . g.25207
cacttgaacccaggaggcggaggctgcagtgagctgagatcacgccattgcactcaagcc c.*2820
. . . . . . g.25267
tggcgacagagcgagactccgtctcaaaaaaaaaagttaaatgacttgagtacccaaaag c.*2880
. . . . . . g.25327
aaatgtcgtgaacatgaaagtacttctcatgtgtccttgagaaatgatgttgctagtgca c.*2940
. . . . . . g.25387
gtgtttcacaattcattttctactaaatgtgtaccattttttaaattgttttaacagaaa c.*3000
. . . . . . g.25447
tatagagtgtgtttcttaggaaatagaatgttatgctttggggctcctgaaacacctcgt c.*3060
. . . . . . g.25507
tttgaaggtgaatctttggttttctcccagaagagggtctgccttgggatgattggagct c.*3120
. . . . . . g.25567
cttaccatcaaaatcagttattcaagtgcttgcccagtgcttcttgaaactcacctctac c.*3180
. . . . . . g.25627
tctgtattttctacagttggttcttgtgttataaatgttgtgagcaacagattaaatgat c.*3240
. . . . . . g.25687
gctgaggaatgaaaaaagattctcattataaatgcttacctaggattctcattatagatg c.*3300
. . . g.25722
cttatctaggttttcataaatgggaatgtaacaat c.*3335
(downstream sequence)
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