(used for variant description)
(last modified February 18, 2024)
This file was created to facilitate the description of sequence variants on transcript NM_003410.3 in the ZFX gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000023.10, covering ZFX transcript NM_003410.3.
(upstream sequence)
g.5099
agagaaa c.-301
. . . . . . | 02 g.7055
ggccggcctgcagcacccgccaccgtcgccggccgcccgcacgtccgtccg | gttcttgct c.-241
. . . . . . g.7115
atattgccccaggctggtctcgaactcctgggctcaagccgttctcccgcctcccactgc c.-181
. . . . . | 03 . g.8094
ccgcctgtcactgccgtctgttccctgagctgtgctttacg | ctgggaaagacatagaaga c.-121
. . . . . . g.8154
actattaagaagatagaattgttttgctgcgcagtacagcaacagtggatgttcaagatt c.-61
. . . . | 04 . . g.28098
aagattagagtcaagttgtgtgattaagacag | gagctgtgactgatgagaattaaaggcc c.-1
. . . . . | 05 g.34540
ATGGATGAAGATGGGCTTGAATTACAACAAGAGCCAAACTCATTTTTTGATGCAACAG | GA c.60
M D E D G L E L Q Q E P N S F F D A T G | p.20
. . . . . . g.34600
GCTGATGGTACACACATGGATGGTGATCAAATTGTTGTGGAAGTACAAGAAACTGTTTTT c.120
A D G T H M D G D Q I V V E V Q E T V F p.40
. . . . . . g.34660
GTTTCAGATGTTGTGGATTCAGACATAACTGTGCATAACTTTGTTCCTGATGACCCAGAT c.180
V S D V V D S D I T V H N F V P D D P D p.60
. . . . . . g.34720
TCAGTTGTAATCCAAGATGTTATTGAGGACGTTGTTATAGAAGATGTTCAGTGCCCAGAT c.240
S V V I Q D V I E D V V I E D V Q C P D p.80
. . . . . . g.34780
ATCATGGAAGAAGCAGATGTGTCTGAAACGGTCATCATTCCTGAGCAAGTGCTGGACTCA c.300
I M E E A D V S E T V I I P E Q V L D S p.100
. . . . . . g.34840
GATGTAACTGAAGAAGTTTCTTTAGCACATTGCACAGTCCCAGATGATGTTTTAGCTTCT c.360
D V T E E V S L A H C T V P D D V L A S p.120
. . . . . . g.34900
GACATTACTTCAGCCTCAATGTCTATGCCAGAACACGTCTTGACGGGTGATTCTATACAT c.420
D I T S A S M S M P E H V L T G D S I H p.140
. . . . . . g.34960
GTGTCTGACGTTGGACATGTTGGACATGTTGGACATGTTGAACATGTGGTTCATGATAGT c.480
V S D V G H V G H V G H V E H V V H D S p.160
. . . . . . g.35020
GTAGTGGAAGCAGAAATTGTCACTGATCCTCTGACTACCGACGTAGTTTCAGAAGAAGTA c.540
V V E A E I V T D P L T T D V V S E E V p.180
. . . . . . g.35080
TTGGTAGCAGACTGTGCCTCTGAAGCAGTCATAGATGCCAATGGGATCCCTGTGGACCAG c.600
L V A D C A S E A V I D A N G I P V D Q p.200
. . . . | 06 . . g.62695
CAGGATGATGACAAAGGCAACTGTGAGGACTACCTTATGATTTCCT | TGGATGATGCTGGC c.660
Q D D D K G N C E D Y L M I S L | D D A G p.220
. . . . . . g.62755
AAAATAGAACACGATGGTTCTTCTGGAATGACCATGGACACAGAGTCGGAAATTGATCCT c.720
K I E H D G S S G M T M D T E S E I D P p.240
. . . . . . g.62815
TGTAAAGTGGATGGCACTTGCCCTGAGGTCATCAAGGTGTACATTTTTAAAGCTGACCCT c.780
C K V D G T C P E V I K V Y I F K A D P p.260
. | 07 . . . . . g.63111
GGAGAAGATGACTTAG | GTGGAACTGTAGACATTGTGGAGAGTGAGCCTGAGAATGATCAT c.840
G E D D L G | G T V D I V E S E P E N D H p.280
. . . . . . g.63171
GGAGTTGAACTGCTTGATCAGAACAGCAGTATTCGTGTTCCCAGGGAAAAGATGGTTTAT c.900
G V E L L D Q N S S I R V P R E K M V Y p.300
. . . . | 08 . . g.63593
ATGACTGTCAATGACTCTCAGCCAGAAGATGAAGATTTAA | ATGTTGCTGAAATCGCTGAC c.960
M T V N D S Q P E D E D L N | V A E I A D p.320
. . . . . . g.63653
GAAGTTTATATGGAAGTGATCGTAGGAGAGGAGGATGCTGCAGCAGCAGCGGCAGCCGCC c.1020
E V Y M E V I V G E E D A A A A A A A A p.340
. . . . . . g.63713
GCCGTGCACGAGCAGCAAATGGATGACAATGAAATCAAAACCTTCATGCCGATTGCATGG c.1080
A V H E Q Q M D D N E I K T F M P I A W p.360
. | 09 . . . . . g.64302
GCAGCAGCTTATG | GTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTGCAAGTGCC c.1140
A A A Y G | N N S D G I E N R N G T A S A p.380
. . . . . . g.64362
CTCTTGCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGCTAAACAAAAACCAAAGAAA c.1200
L L H I D E S A G L G R L A K Q K P K K p.400
. . . | 10 . . . g.65574
AGGAGAAGACCTGATTCCAGGCAGTACCAAACAG | CAATAATTATTGGCCCTGATGGACAT c.1260
R R R P D S R Q Y Q T A | I I I G P D G H p.420
. . . . . . g.65634
CCTTTGACTGTCTATCCTTGCATGATTTGTGGGAAGAAGTTTAAGTCGAGAGGTTTTTTG c.1320
P L T V Y P C M I C G K K F K S R G F L p.440
. . . . . . g.65694
AAAAGGCACATGAAAAACCATCCCGAACACCTTGCCAAGAAGAAATACCGCTGTACTGAC c.1380
K R H M K N H P E H L A K K K Y R C T D p.460
. . . . . . g.65754
TGTGATTACACTACCAACAAGAAGATAAGTTTACACAACCACCTGGAGAGCCACAAGCTG c.1440
C D Y T T N K K I S L H N H L E S H K L p.480
. . . . . . g.65814
ACCAGCAAGGCAGAGAAGGCCATTGAATGCGATGAGTGTGGGAAGCATTTCTCTCATGCA c.1500
T S K A E K A I E C D E C G K H F S H A p.500
. . . . . . g.65874
GGGGCTTTGTTTACTCACAAAATGGTGCATAAGGAAAAAGGAGCCAACAAAATGCACAAG c.1560
G A L F T H K M V H K E K G A N K M H K p.520
. . . . . . g.65934
TGTAAATTCTGTGAATACGAGACAGCTGAACAAGGGTTATTGAATCGCCACCTCTTGGCA c.1620
C K F C E Y E T A E Q G L L N R H L L A p.540
. . . . . . g.65994
GTCCACAGCAAGAACTTTCCTCATATTTGTGTGGAGTGTGGTAAGGGTTTTCGTCACCCG c.1680
V H S K N F P H I C V E C G K G F R H P p.560
. . . . . . g.66054
TCAGAGCTCAAAAAGCACATGAGAATCCATACTGGGGAGAAGCCGTACCAATGCCAGTAC c.1740
S E L K K H M R I H T G E K P Y Q C Q Y p.580
. . . . . . g.66114
TGCGAATATAGGTCTGCAGACTCTTCTAACTTGAAAACGCATGTCAAAACTAAGCATAGT c.1800
C E Y R S A D S S N L K T H V K T K H S p.600
. . . . . . g.66174
AAAGAGATGCCATTCAAGTGTGACATTTGTCTTCTGACTTTCTCGGATACCAAAGAGGTG c.1860
K E M P F K C D I C L L T F S D T K E V p.620
. . . . . . g.66234
CAGCAACATGCTCTTATCCACCAAGAAAGCAAAACACACCAGTGTTTGCATTGCGACCAC c.1920
Q Q H A L I H Q E S K T H Q C L H C D H p.640
. . . . . . g.66294
AAGAGTTCGAACTCAAGTGATTTGAAACGACACATAATTTCAGTTCACACGAAAGACTAC c.1980
K S S N S S D L K R H I I S V H T K D Y p.660
. . . . . . g.66354
CCCCATAAGTGTGACATGTGTGATAAAGGCTTTCACAGGCCTTCAGAACTCAAGAAACAC c.2040
P H K C D M C D K G F H R P S E L K K H p.680
. . . . . . g.66414
GTGGCTGCCCACAAGGGCAAAAAAATGCACCAGTGTAGACATTGTGACTTTAAGATTGCA c.2100
V A A H K G K K M H Q C R H C D F K I A p.700
. . . . . . g.66474
GATCCATTTGTTCTAAGTCGCCATATTCTCTCAGTTCACACAAAGGATCTTCCATTTAGG c.2160
D P F V L S R H I L S V H T K D L P F R p.720
. . . . . . g.66534
TGCAAGAGATGTAGAAAGGGATTTAGGCAACAGAGTGAGCTTAAAAAGCATATGAAGACA c.2220
C K R C R K G F R Q Q S E L K K H M K T p.740
. . . . . . g.66594
CACAGTGGCAGGAAAGTGTATCAGTGTGAGTACTGTGAGTATAGCACTACAGATGCCTCA c.2280
H S G R K V Y Q C E Y C E Y S T T D A S p.760
. . . . . . g.66654
GGCTTTAAACGGCACGTTATTTCCATTCACACGAAAGACTATCCTCACCGGTGTGAGTAC c.2340
G F K R H V I S I H T K D Y P H R C E Y p.780
. . . . . . g.66714
TGCAAGAAAGGCTTCCGAAGACCTTCAGAAAAGAACCAGCACATAATGCGACATCATAAA c.2400
C K K G F R R P S E K N Q H I M R H H K p.800
. g.66732
GAAGTTGGCCTGCCCTAA c.2418
E V G L P X p.805
. . . . . . g.66792
caatacttctacagaacgtttgtagagatattggccttgaagcagaaaattcattttaaa c.*60
. . . . . . g.66852
gccaatcagtctcattcacatacaatactgtatattgatttatgctgtgtacaaatagaa c.*120
. . . . . . g.66912
ttattacttctagttgacttttttttaaatatacattttgctcagtagtgtgttctgaat c.*180
. . . . . . g.66972
tctattcagtttgtttaataaatagggaaaactggcaacatgctagttacttttaataaa c.*240
. . . . . . g.67032
gtaatccctgattctataccgaagttttatatcttagaattttatatttatttaaatatt c.*300
. . . . . . g.67092
taccttgcttaccttgatggtactcttctaagaccattaacttaaggtaactttatattg c.*360
. . . . . . g.67152
gtaactctgaaagtattcatgttgactcatttttttccccatacatttctcacaataaaa c.*420
. . . . . . g.67212
ttgtcagagacatctactaatataaatgggagattttacagtcaggtctaattatcataa c.*480
. . . . . . g.67272
catggaagtcatttacttgtcttgcttaatattttcagaccacttgacagtgaaagtttc c.*540
. . . . . . g.67332
catttgagctgttgcgtccctggctttgctgagtaaagagcagtggctgggttcgtgttt c.*600
. . . . . . g.67392
acttttcaaatatacttcttttggctttctttggattatttacatcttttgtcagcgtag c.*660
. . . . . . g.67452
caaacttttagaaaaccttattgaaaaactgtgcttgctcatgttgtattttgattattc c.*720
. . . . . . g.67512
tgtctgtgcggcttcatcttggaatggttgtgtgctacaaatgacacttactgaggactg c.*780
. . . . . . g.67572
cattttggaatctcctagaggtaactcatggcttataggatcttttgcaactttatgtat c.*840
. . . . . . g.67632
gtaaatgtaccctgaattatatatatacacatatatatcatgtacctgtgtgtattgctt c.*900
. . . . . . g.67692
attttacatatttatacacacaaccccaagtagtagttgtttaaaatctataatgaaaag c.*960
. . . . . . g.67752
tattaaatttacaataacatgaaagatccagggatgcatgagagagcattttgtaagtca c.*1020
. . . . . . g.67812
tgctcttcagagagactactcaggtgaagaattagaaggaaaataaggacactagtattt c.*1080
. . . . . . g.67872
ttaaagagtaaagatattttcttttaaatatctttggtaattgaaacatagaggttaaga c.*1140
. . . . . . g.67932
tgtttctaggtagaatgttttcatacaatttcacctccatgtctttatgtttttctgaaa c.*1200
. . . . . . g.67992
agcaaatgagtatccagacatgactcccacagttctctttgagaagcctgagagggaact c.*1260
. . . . . . g.68052
ctgtcttacctagtgagggggatggaaaagaagtgatggctctgtggaccagagaacggg c.*1320
. . . . . . g.68112
tgctaattatgacttcacactcggcaagttcaggctgatctgttatttctcagttacagt c.*1380
. . . . . . g.68172
tagcaaactttaaaaacttaacactcaagttggctttgattaaaaggtaaagatgtgttt c.*1440
. . . . . . g.68232
taagtggataaggaaagtctgaggccttatttggaacatcactaagtcttccacaggttt c.*1500
. . . . . . g.68292
tttgtttgtttgtttttttttgttgtttttttttcttaagacggagtcttgctctgttgc c.*1560
. . . . . . g.68352
ccaggctggactgcagtggtgtgatcactgcaacctctgcagctcactgcaacctctgct c.*1620
. . . . . . g.68412
tcctgggttcaagcaattatctgcctcagcctctcgagtagctgggattacaggcgccca c.*1680
. . . . . . g.68472
ccaccacgcccggctaattttttgtatttttaatagagatggggtttcaccatcttggcc c.*1740
. . . . . . g.68532
aggctggtcttgaaccctgacctcgtgatccacctgcctcggccttccatagtgctgggt c.*1800
. . . . . . g.68592
ttacaggcgtgagccaccgtgcccagacaccacataggtctgaatcagtgtcatacattc c.*1860
. . . . . . g.68652
ataaaacaaactcggttaattagaacttggttatgttaagacgaatctgggagaacagaa c.*1920
. . . . . . g.68712
aacagtttttggggtcccttcagttggctattggtccgtatgcatctagcacattgtagg c.*1980
. . . . . . g.68772
agatttagaaattgtcttcccacccgatagctgccttgtcacctcattatggtgctccat c.*2040
. . . . . . g.68832
cccctgtgtgcttaggtttttacctttcatctttctctttgccattgatgtttgtattca c.*2100
. . . . . . g.68892
agagttatatttttagggttagaaatcaaaatatttggtgtttggcaaacctctgaagtg c.*2160
. . . . . . g.68952
ctagactgatttagtctagttttaaaccaagtgctttaggcaggtgtgaactccagccca c.*2220
. . . . . . g.69012
aatgccagtcaaagtcaaggcatgggttttcctagcctatcttataggaaattcctgtac c.*2280
. . . . . . g.69072
cttcttggcccccataatgtgttttttttttttttttttttttaaactaacttacaattt c.*2340
. . . . . . g.69132
tgtgatccgtgattcattgccctgcgattcttgaaagctctgtctgtttttttgtgagaa c.*2400
. . . . . . g.69192
cctttaaaatctcccttaatttttattttcccagaaataatgtaaaaacacttaaatgaa c.*2460
. . . . . . g.69252
agtggaaatgtattaattttaaatcctataaaattaatacagaaaatataaatgattggg c.*2520
. . . . . . g.69312
tcatttaactatatttttttaaataaactgaaagataaagaacacaacacttcacacatt c.*2580
. . . . . . g.69372
ttatatttctcttacatactccggaatcatacacagttctttttaaagcacaacattaaa c.*2640
. . . . . . g.69432
acctttaaaaggtatttaagggtttggtcaagtgaatatgataaaacatacttgtctgta c.*2700
. . . . . . g.69492
taaagagaaaatgaaattgtagtcactgttatgtactgacattagttacaacctagtttt c.*2760
. . . . . . g.69552
aattcttaaaacaattttgattagcaaagctaaaaaaaaatggatgtttcagttaaatgt c.*2820
. . . . . . g.69612
tttaaagaggtacagatttttacaaggacataatataagttattgttctgtagaaatatc c.*2880
. . . . . . g.69672
ctattaaatattgtatgtccctccctctgtacactttgtaaagaaagtaaaatacataaa c.*2940
. . . . . . g.69732
aagaaaatcatatagggatgtgtgacattattgtaattgtgtacttgagaataacgtgca c.*3000
. . . . . . g.69792
aaaataaaaatcagaatattttcctgttattgaatgtttagtctatttgataccagtact c.*3060
. . . . . . g.69852
aagttaatgctttttctcaaggaaaaaaaatgtacagtttttgtaaacctaataaacatc c.*3120
. . . . . . g.69912
aaaagcagtggattattttcatccccccatttcttaatttctttttcacagcagtggaat c.*3180
. . . . . . g.69972
gcaaagtgcttgattgctttgaattttgtgactcggatgcaaatactggtaatatttcag c.*3240
. . . . . . g.70032
ttctgtgaatttgcaagtaatatttcagagaagttaagaggtgattggtgagtcctttga c.*3300
. . . . . . g.70092
tgagcatgtccttggaattcattttttcttttatcttcataaaggatttgttttattagc c.*3360
. . . . . . g.70152
atctccaattcccctgagataaattactcatgcataaagtggtttttgagagcacttaaa c.*3420
. . . . . . g.70212
gttcatttcagtattaatttacagcatatttaatcagtggggactgttaccacctccaca c.*3480
. . . . . . g.70272
acagaaatcatgccctcgagttaccccactgcgcccagtttagaggactagtagatgcta c.*3540
. . . . . . g.70332
acatactagggaatggtcattgccacagttaaaaatcggcagttaagtaaatgtcaggag c.*3600
. . . . . . g.70392
tcaaaagagatagagttgtgccatctttgattttatagacaagattctgcagttcttcca c.*3660
. . . . . . g.70452
actgtatgaacaaacgtttgcctaatagttgaaacaataaattaaaattttaggtaaatg c.*3720
. . . . . . g.70512
acgaagggaatgtggtgaatgtcactgtccagagccataaatcagacaaaaccatacata c.*3780
. . . . . . g.70572
gcatgctgaaaaacttttgtaatggaacacccaacaaatgacacctaacctgtctgtgat c.*3840
. . . . . . g.70632
ccaacaagtccgataacatgctgctgtatttgtattctctgggaatctcagtattaataa c.*3900
. . . . . . g.70692
tttcatttcccacaaattctagcattcatgtaaggaaaaacatggctaatcaatatctta c.*3960
. . . . . . g.70752
aaggggcaatctttcagagcagtggttttcaaagtatggccggacagcattggcagcatc c.*4020
. . . . . . g.70812
ttaatctcctgggactttgttaaaaatgcaaattctcagccccaccctagtcctactgaa c.*4080
. . . . . . g.70872
ttgggaaactggcgtgggacccagcagtctttgttttaacatgttctccaagtgattctg c.*4140
. . . . . . g.70932
atgcctgttcaaacttgggaaacacttttagagcacttgaggaacctaaaagatgactgg c.*4200
. . . . . . g.70992
ttcagcattttgtgtggtagataagaaagaaattatcacaaaaaatcagaaatgaacagt c.*4260
. . . . . . g.71052
gagagaaaaataggaccccagacagtttataccttccatttgctgttttaaaagtgtgag c.*4320
. . . . . . g.71112
cctgccaagtcaacaagtatgcctttagcgcacatgtaaatagcctgcacttcctaaatc c.*4380
. . . . . . g.71172
tcgtgtggcctcccatggttacattcttcaaaggtaaactgagttgagaggaagattcag c.*4440
. . . . . . g.71232
catttaaaagagaagggttgaaaaagattgtgtgtgtgtgtgtgtgtgtttaattggccc c.*4500
. . . . . . g.71292
agggttacttaaataaatcataaccattttgccacattctgtaactgtttagctaaggtc c.*4560
. . . . . . g.71352
aaattaagtttaccctatggattttgtttcatcttttgtttcgtgtatatactgtttgcc c.*4620
. . . . . . g.71412
tttttcataaaaatcttggatttgttatatattgttcctgttatttttgacatctttgct c.*4680
. . . . . . g.71472
attgtaaataaattactattttgttttaagttaccctagtggagtgttggctatagacaa c.*4740
. . . . . . g.71532
ggtatatactcgaaacgaggagacttaaatcacacagttaatgaattcccaacttgtttg c.*4800
. . . . . . g.71592
aagctggaggtgattcgactcccttcagtggttcaacactaataatagcaccaaggaaca c.*4860
. g.71611
tgtcactggtgcatatagg c.*4879
(downstream sequence)
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