(used for variant description)
(last modified July 6, 2017)
This file was created to facilitate the description of sequence variants on transcript NM_201269.2 in the ZNF644 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_029760.1, covering ZNF644 transcript NM_201269.2.
(upstream sequence)
. . . . g.5043
gtttccgctgccctcgtttgtctaattggcccagacgctccac c.-241
. . . . . . g.5103
cagcgcgaagcttcccgggagctcctcgctggccacccccgcggcccgcagcccggcaga c.-181
. . . . . . g.5163
ggcgggaaagcagcgcgcctgcgccgtgggaaccggggctggaggcgaaaagcggggagc c.-121
. . . . . . g.5223
ggaggggggccgctggagccgagtagcgtacagagcggcgtgtgacgcggggacgccgcg c.-61
. . . . . | 02 . g.44902
tgctcccaacgtcgccccggtttgacgcacacggcaccaaact | gtttgatttaattttgg c.-1
. . . . | 03 . . g.85962
ATGAGATCGTTCTTGCAGCAAGATGTTAATAAGACAAAATCTAG | ACTAAATGTGTTAAAT c.60
M R S F L Q Q D V N K T K S R | L N V L N p.20
. . . . . . g.86022
GGGCTTGCCAACAATATGGATGATTTGAAGATAAACACCGATATTACTGGTGCTAAAGAA c.120
G L A N N M D D L K I N T D I T G A K E p.40
. . . . . . g.86082
GAACTCCTAGATGACAACAATTTTATCTCAGACAAAGAGAGCGGAGTTCATAAGCCAAAA c.180
E L L D D N N F I S D K E S G V H K P K p.60
. . . . . . g.86142
GATTGTCAAACATCATTTCAGAAAAATAATACGTTGACTCTGCCTGAAGAACTGTCAAAG c.240
D C Q T S F Q K N N T L T L P E E L S K p.80
. . . . . . g.86202
GACAAATCTGAAAACGCCTTAAGTGGAGGCCAGTCTAGTCTATTTATACATGCTGGTGCT c.300
D K S E N A L S G G Q S S L F I H A G A p.100
. . . . . . g.86262
CCTACTGTTTCTAGTGAAAACTTTATCTTGCCTAAAGGAGCTGCTGTTAATGGACCAGTT c.360
P T V S S E N F I L P K G A A V N G P V p.120
. . . . . . g.86322
TCACACTCCTCCTTAACTAAGACTTCCAATATGAATAAAGGCAGTGTTTCATTAACCACT c.420
S H S S L T K T S N M N K G S V S L T T p.140
. . . . . . g.86382
GGACAGCCTGTGGATCAGCCAACAACAGAATCTTGTTCAACTTTGAAGGTAGCAGCTGAT c.480
G Q P V D Q P T T E S C S T L K V A A D p.160
. . . . . . g.86442
CTTCAGCTGTCTACACCACAGAAAGCAAGTCAACACCAAGTTTTATTTTTGTTATCAGAT c.540
L Q L S T P Q K A S Q H Q V L F L L S D p.180
. . . . . . g.86502
GTAGCACATGCTAAGAATCCCACCCATTCCAATAAAAAACTACCTACCTCTGCTTCAGTT c.600
V A H A K N P T H S N K K L P T S A S V p.200
. . . . . . g.86562
GGTTGTGACATTCAGAATTCAGTAGGGAGTAATATAAAGTCAGATGGCACTTTAATAAAT c.660
G C D I Q N S V G S N I K S D G T L I N p.220
. . . . . . g.86622
CAAGTAGAGGTGGGTGAGGATGGTGAAGATTTATTGGTGAAAGATGATTGTGTCAATACA c.720
Q V E V G E D G E D L L V K D D C V N T p.240
. . . . . . g.86682
GTAACGGGAATTTCCTCAGGTACAGATGGATTTAGGTCAGAAAATGATACAAACTGGGAT c.780
V T G I S S G T D G F R S E N D T N W D p.260
. . . . . . g.86742
CCCCAAAAAGAGTTCATTCAATTTCTTATGACTAATGAGGAAACAGTAGATAAAGCTCCA c.840
P Q K E F I Q F L M T N E E T V D K A P p.280
. . . . . . g.86802
CCTCATTCTAAAATAGGTCTAGAAAAAAAAAGAAAGCGAAAAATGGATGTAAGCAAGATA c.900
P H S K I G L E K K R K R K M D V S K I p.300
. . . . . . g.86862
ACTCGTTATACCGAGGATTGCTTTAGTGATTCTAATTGTGTACCCAATAAATCAAAAATG c.960
T R Y T E D C F S D S N C V P N K S K M p.320
. . . . . . g.86922
CAAGAAGTAGACTTTCTAGAACAAAATGAAGAGCTACAAGCAGTAGACTCACAGAAATAT c.1020
Q E V D F L E Q N E E L Q A V D S Q K Y p.340
. . . . . . g.86982
GCATTATCAAAAGTGAAGCCTGAATCAACTGATGAAGACTTAGAATCTGTGGATGCCTTC c.1080
A L S K V K P E S T D E D L E S V D A F p.360
. . . . . . g.87042
CAACATCTAATTTATAACCCAGATAAGTGTGGAGAAGAGAGTTCACCTGTTCATACTAGC c.1140
Q H L I Y N P D K C G E E S S P V H T S p.380
. . . . . . g.87102
ACTTTTCTTTCAAATACCTTAAAAAAGAAATGTGAAGAGAGTGATTCTGAGTCACCTGCT c.1200
T F L S N T L K K K C E E S D S E S P A p.400
. . . . . . g.87162
ACTTTCAGTACCGAAGAGCCATCATTCTACCCCTGTACAAAGTGCAATGTGAATTTTAGG c.1260
T F S T E E P S F Y P C T K C N V N F R p.420
. . . . . . g.87222
GAGAAGAAGCACCTCCACAGGCATATGATGTATCATTTAGATGGGAATAGTCACTTTCGC c.1320
E K K H L H R H M M Y H L D G N S H F R p.440
. . . . . . g.87282
CATCTTAATGTCCCAAGGCCATATGCTTGTAGAGAATGTGGACGGACATTTCGAGATCGC c.1380
H L N V P R P Y A C R E C G R T F R D R p.460
. . . . . . g.87342
AATTCACTTCTAAAACATATGATTATTCACCAGGAGAGAAGACAGAAGTTGATGGAGGAA c.1440
N S L L K H M I I H Q E R R Q K L M E E p.480
. . . . . . g.87402
ATTCGTGAATTGAAAGAACTTCAGGATGAAGGAAGAAGTGCACGATTACAGTGTCCTCAG c.1500
I R E L K E L Q D E G R S A R L Q C P Q p.500
. . . . . . g.87462
TGTGTGTTTGGTACCAATTGCCCTAAAACATTTGTGCAACATGCTAAAACCCATGAAAAA c.1560
C V F G T N C P K T F V Q H A K T H E K p.520
. . . . . . g.87522
GATAAAAGGTACTACTGCTGTGAAGAGTGTAACTTCATGGCAGTGACAGAAAATGAATTG c.1620
D K R Y Y C C E E C N F M A V T E N E L p.540
. . . . . . g.87582
GAATGCCATCGAGGCATTGCACATGGGGCAGTGGTAAAATGCCCTATGGTCACTTCTGAT c.1680
E C H R G I A H G A V V K C P M V T S D p.560
. . . . . . g.87642
ATTGCCCAGAGAAAAACACAAAAAAAGACTTTCATGAAAGACTCTGTAGTAGGATCATCC c.1740
I A Q R K T Q K K T F M K D S V V G S S p.580
. . . . . . g.87702
AAAAAATCAGCTACCTACATATGTAAGATGTGTCCTTTTACTACTTCAGCCAAAAGTGTT c.1800
K K S A T Y I C K M C P F T T S A K S V p.600
. . . . . . g.87762
TTAAAAAAGCACACGGAGTACTTGCATTCATCATCATGTGTTGATTCATTTGGTAGTCCT c.1860
L K K H T E Y L H S S S C V D S F G S P p.620
. . . . . . g.87822
CTTGGACTTGATAAAAGAAAAAATGACATCCTTGAAGAACCTGTAGATAGTGATAGCACT c.1920
L G L D K R K N D I L E E P V D S D S T p.640
. . . . . . g.87882
AAAACATTAACTAAACAACAGTCAACCACATTTCCAAAGAACTCTGCTTTAAAACAAGAT c.1980
K T L T K Q Q S T T F P K N S A L K Q D p.660
. . . . . . g.87942
GTGAAGCGAACATTTGGATCAACCTCACAATCAAGTAGTTTTTCAAAAATTCATAAGCGG c.2040
V K R T F G S T S Q S S S F S K I H K R p.680
. . . . . . g.88002
CCACACAGAATACAGAAAGCTCGGAAAAGCATTGCCCAATCAGGTGTAAACATGTGCAAT c.2100
P H R I Q K A R K S I A Q S G V N M C N p.700
. . . . . . g.88062
CAAAACAGCTCTCCTCATAAGAATGTTACAATTAAAAGCAGCGTTGACCAAAAACCTAAG c.2160
Q N S S P H K N V T I K S S V D Q K P K p.720
. . . . . . g.88122
TATTTCCATCAAGCAGCAAAAGAAAAGTCTAATGCCAAGGCAAATAGCCACTATTTGTAT c.2220
Y F H Q A A K E K S N A K A N S H Y L Y p.740
. . . . . . g.88182
AGACACAAATATGAAAACTATAGGATGATCAAAAAATCAGGTGAATCATATCCTGTGCAT c.2280
R H K Y E N Y R M I K K S G E S Y P V H p.760
. . . . . . g.88242
TTCAAAAAAGAAGAAGCTAGTTCATTAAATTCTTTACACCTGTTTTCATCATCAAGTAAT c.2340
F K K E E A S S L N S L H L F S S S S N p.780
. . . . . . g.88302
TCTCACAACAATTTTATTTCAGACCCTCATAAGCCTGACGCCAAAAGGCCTGAAAGCTTC c.2400
S H N N F I S D P H K P D A K R P E S F p.800
. . . . . . g.88362
AAAGATCACAGACGTGTAGCTGTAAAGAGAGTAATTAAGGAATCTAAGAAGGAAAGTTCT c.2460
K D H R R V A V K R V I K E S K K E S S p.820
. . . . . . g.88422
GTTGGAGGGGAAGACTTGGATAGCTATCCAGATTTTTTGCATAAAATGACTGTTGTCGTT c.2520
V G G E D L D S Y P D F L H K M T V V V p.840
. . . . . . g.88482
TTGCAAAAACTTAATTCTGCTGAAAAGAAAGATAGTTATGAAACAGAAGATGAAAGTTCC c.2580
L Q K L N S A E K K D S Y E T E D E S S p.860
. . . . . . g.88542
TGGGATAATGTTGAGTTAGGAGACTACACTACACAGGCCATAGAAGATGAAACCTATAGT c.2640
W D N V E L G D Y T T Q A I E D E T Y S p.880
. . . . . . g.88602
GATATTAATCAAGAGCATGTAAATTTATTCCCTTTATTTAAGAGCAAAGTGGAAGGTCAG c.2700
D I N Q E H V N L F P L F K S K V E G Q p.900
. . . . . . g.88662
GAGCCTGGAGAAAATGCTACTCTTAGTTATGACCAAAACGATGGCTTTTATTTTGAATAC c.2760
E P G E N A T L S Y D Q N D G F Y F E Y p.920
. . . . . . g.88722
TATGAAGATACTGGAAGTAACAACTTTTTGCATGAGATACATGATCCTCAGCATTTAGAA c.2820
Y E D T G S N N F L H E I H D P Q H L E p.940
. . . . . . g.88782
ACTGCAGATGCTTCATTGTCAAAGCATAGTTCTGTTTTTCATTGGACTGATTTGTCTCTT c.2880
T A D A S L S K H S S V F H W T D L S L p.960
. . . . . . g.88842
GAGAAGAAATCGTGTCCTTACTGCCCAGCAACATTTGAAACAGGTGTTGGGTTATCAAAT c.2940
E K K S C P Y C P A T F E T G V G L S N p.980
. . . . . . g.88902
CATGTCAGGGGGCATCTTCACAGAGCAGGATTAAGCTATGAAGCCCGTCATGTTGTATCA c.3000
H V R G H L H R A G L S Y E A R H V V S p.1000
. . . . . . g.88962
CCAGAACAAATAGCCACAAGTGACAAAATGCAGCATTTCAAAAGAACTGGCACAGGAACA c.3060
P E Q I A T S D K M Q H F K R T G T G T p.1020
. . | 04 . . . . g.89203
CCTGTTAAACGAGTTAGAAAAG | CTATAGAGAAGTCTGAAACCACTTCTGAACACACTTGT c.3120
P V K R V R K A | I E K S E T T S E H T C p.1040
. . . . . . g.89263
CAGCTCTGTGGTGGTTGGTTTGATACTAAAATTGGATTATCAAATCATGTTAGAGGCCAC c.3180
Q L C G G W F D T K I G L S N H V R G H p.1060
. . . . . . g.89323
TTGAAAAGACTTGGAAAGACGAAATGGGATGCTCACAAATCTCCAATCTGTGTTCTGAAT c.3240
L K R L G K T K W D A H K S P I C V L N p.1080
. . . . . . g.89383
GAGATGATGCAAAATGAAGAAAAATATGAAAAAATCTTAAAGGCATTGAACAGTCGTCGT c.3300
E M M Q N E E K Y E K I L K A L N S R R p.1100
. . . . . . g.89443
ATTATTCCCAGACCATTTGTAGCTCAAAAACTTGCATCAAGTGATGACTTTATATCTCAA c.3360
I I P R P F V A Q K L A S S D D F I S Q p.1120
. . . . . . g.89503
AATGTTATACCTCTTGAAGCATACCGTAATGGCCTAAAGACTGAAGCTCTGTCAGTGTCT c.3420
N V I P L E A Y R N G L K T E A L S V S p.1140
. . . . . . g.89563
GCATCAGAAGAAGAAGGGCTGAATTTCTTAAATGAATATGATGAAACAAAACCAGAACTG c.3480
A S E E E G L N F L N E Y D E T K P E L p.1160
. . . . . . g.89623
CCCAGTGGGAAAAAGAATCAGTCTCTTACACTCATAGAACTTCTTAAAAATAAAAGGATG c.3540
P S G K K N Q S L T L I E L L K N K R M p.1180
. . . . . . g.89683
GGAGAAGAAAGGAATTCTGCTATTTCTCCTCAAAAGATCCATAATCAGACAGCAAGAAAG c.3600
G E E R N S A I S P Q K I H N Q T A R K p.1200
. . . . . . g.89743
AGATTCGTTCAGAAATGCGTTCTTCCATTAAATGAGGATAGTCCGTTGATGTATCAGCCA c.3660
R F V Q K C V L P L N E D S P L M Y Q P p.1220
. . | 05 . . . g.109133
CAAAAAATGGACTTGACTATGCACTCAG | CCTTAGATTGTAAGCAAAAGAAATCAAGGTCA c.3720
Q K M D L T M H S A | L D C K Q K K S R S p.1240
. . . . . . g.109193
AGATCTGGAAGCAAGAAGAAAATGCTAACATTACCTCATGGTGCTGACGAGGTTTACATT c.3780
R S G S K K K M L T L P H G A D E V Y I p.1260
. | 06 . . . . . g.110314
CTCCGATGCAG | GTTTTGTGGCCTAGTCTTTCGAGGACCCTTGTCTGTTCAGGAAGACTGG c.3840
L R C R | F C G L V F R G P L S V Q E D W p.1280
. . . . . . g.110374
ATTAAGCACTTACAACGACATATTGTAAACGCTAATCTTCCACGGACTGGAGCTGGCATG c.3900
I K H L Q R H I V N A N L P R T G A G M p.1300
. . . . . . g.110434
GTGGAAGTCACGTCACTACTTAAAAAGCCTGCCTCCATTACAGAAACTTCATTTTCTCTA c.3960
V E V T S L L K K P A S I T E T S F S L p.1320
. . g.110458
CTAATGGCCGAAGCAGCTTCATAG c.3984
L M A E A A S X p.1327
. . . . . . g.110518
aaccaggaaaccttttaaatagccagtttgaattggatgtaaatttgaaattcttttttt c.*60
. . . . . . g.110578
ttaagccacattaaattatctgtttataaatactaaagcaggaaaatggggggaaagtga c.*120
. . . . . . g.110638
attacagtgacatcagagcaaattgaatacttaaaacagtaagtagtctatatattttat c.*180
. . . . . . g.110698
atagggtggaagatgtgtttttaaggtttatgaagttttgttggttaactgtgttcactc c.*240
. . . . . . g.110758
agtaaaagagcagtacatgtaagcagccattaataaactgttgcacatggatacttatag c.*300
. . . . . . g.110818
acagacttattggacaattatgttttttgcagtgttaccagaatcaaggctctgtttatt c.*360
. . . . . . g.110878
ccccacaagacttgcatagaaaaataagatattatattttgtttgtatgtatttagtgtt c.*420
. . . . . . g.110938
ttgtataataccaagaaccgctgactaaatttactcaaattagggcattaaatatcatgt c.*480
. . . . . . g.110998
acttcatagtttgagactgttcactcaaatagggcagagtactattctatctagatgtgt c.*540
. . . . . . g.111058
aagtgttttttttaaaatcacatggaacggttttttttatactaaaaagtggagggagat c.*600
. . . . . . g.111118
ttgtttaaacaagtatttctaaaagaaatatgtacatagttctggaaattatttgtggta c.*660
. . . . . . g.111178
aggaaatattctttactccagttgcatttctcagacaataaagtggtgcatccatgctac c.*720
. . . . . . g.111238
ctcctactttgtcaacaaagatgctatttaccctttacatttttgtatcataatagattt c.*780
. . . . . . g.111298
taaaaatctaatgttctttattgcaagacattcttttgttaacaggtttgtttcttttta c.*840
. . . . . . g.111358
atgttttacctaaaatttgacatgcttacaggacaggtttgcctcttactttatttaaca c.*900
. . . . . . g.111418
ttgtagaaatgtaattaataaacaatgctcactacacagtttagaatagacgttctcatt c.*960
. . . . . . g.111478
tatattatcttccaaatttgatcagttagcaaaacttaatacaccaattaaaatatttct c.*1020
. . . . . . g.111538
acatatgagaatgtttacaatttaaattttagaacttgttttggatgtgattatatgtac c.*1080
. . . . . . g.111598
gaaaatcgtgtaacactatgctcatgctaagaaccgacataacagaattactgaaataaa c.*1140
. . . . . . g.111658
tgtgctgtgaggaatggaaaatatggtgcaggtgtcttggtcatgataaattgtgattct c.*1200
. . . . . . g.111718
ttttaaaaattttttccaaaaacaattaggtattttaatctgaaatcagattcctttaca c.*1260
. . . . . . g.111778
aacaacaagtttttgtatgcaagcaccattttatttcatgtagtatggctaatactatag c.*1320
. . . . . . g.111838
ttgaaccaaggatatgcattgattctttgcttcgtatgtaaataaagttaaaaacagtta c.*1380
. . . . . . g.111898
aaataaggagtattttggtagagtatatacatacctcactgccagtgaaattgctttcct c.*1440
. . . . . . g.111958
atggtatatctccttaccagaaaaatctctaaataaaaaaaggtttaaagaaaattaaaa c.*1500
(downstream sequence)
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