Transcript #00000245 (NM_017890.3, VPS13B gene)

Transcript name transcript variant 5
Gene name VPS13B (vacuolar protein sorting 13 homolog B (yeast))
Chromosome 8
Transcript - NCBI ID NM_017890.3
Transcript - Ensembl ID -
Protein - NCBI ID NP_060360.3
Protein - Ensembl ID -
Protein - Uniprot ID -
Exon/intron information Exon/intron information table: HTML, Txt
Remarks -
Date created 2012-06-27 09:59:08 +02:00 (CEST)
Date last edited N/A


Variants

823 entries on 9 pages. Showing entries 1 - 100.
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Affects function     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     
+/+ 01-09a c.(?-12444)_996+?del r.? p.?
+?/. - c.-111_(762+1_763-1){0} r.0? p.0?
+/. - c.7220_7221A r.(?) p.(?)
+/+ 01-20 c.-79752_2516-7756del r.? p?
+/+ 01-09a c.-23990_1207-5855del r.? p.?
+?/. - c.(?_-1)_(937+1_938-1)del r.0? p.0?
+?/. - c.? r.? p.?
+?/. - c.? r.? p.?
+/. 56 c.? r.? p.?
+?/. - c.? r.? p.?
+/. 2 c.3G>A r.(?) p.0?
?/. - c.8A>T r.(?) p.(Glu3Val)
+/+ 02 c.22_23delCCinsA r.22_23delccinsa p.Pro8Lysfs*3
-/. - c.147+90A>G r.(=) p.(=)
-/. - c.147+112T>C r.(=) p.(=)
?/. - c.148-8608G>C - p.(=)
-/. - c.174A>G r.(?) p.(Leu58=)
?/. - c.203A>G r.(?) p.(His68Arg)
+/+ 3 c.219_220delinsT r.(219_220delinsu) p.(Lys73Asnfs*8)
+/. 3 c.219_220delinsT r.(219_220delinsu) p.(Lys73Asnfs*8)
+/+ 04-17 c.291+6437_2334-3424del r.? p.?
?/. - c.291+28132C>A r.(?) p.(=)
-?/. - c.292-3T>C r.spl? p.?
+/+ 3i_13i c.(291+1_292-1)_(1843+1_1844-1)dup r.(292_1843dup) p.?
+/. 3i_13i c.(291+1_292-1)_(1843+1_1844-1)dup r.? p.?
+/+ 3i_16i c.(291+1_292-1)_(2333+1_2334-1)del r.(292_2333del) p.(Asp99Glnfs*9)
+/. 3i_16i c.(291+1_292-1)_(2333+1_2334-1)del r.? p.?
+/. 3i_16i c.(291+1_292-1)_(2333+1_2334-1)del r.? p.?
-?/. - c.358A>G r.(?) p.(Ile120Val)
+/+ 4 c.401_402insT r.(?) p.(Pro136Thrfs*10)
+/. 4 c.401_402insT r.(404dupu) p.(Leu135Phefs*11)
+/. 4i c.412+1G>T r.spl p.?
./. - c.412+3161_580+208del r.(?) p.(Gly138_Ser193del)
+/+? 4i c.413-2A>G r.spl p.?
+/. 4i c.413-2A>G r.spl? p?
+/. 4i c.413-2A>G r.spl? p?
+/+ 06-15 c.413-?_2013+?del r.(413_2013del) p.(Gly138Glufs*4)
+/+ 06 c.436C>T r.(?) p.(Arg146*)
+?/. - c.436C>T r.(?) p.(Arg146Ter)
+/+ 06 c.467_470delATAA r.467_470delauaa p.Asn156Ilefs*4
+?/. - c.468_471del r.(?) p.(Asn157Serfs*3)
+/+ 06 c.478_481delCTAA r.(?) p.(Leu160Asnfs*21)
?/. - c.505C>A r.(?) p.(Leu169Ile)
-?/. - c.560G>A r.(?) p.(Arg187His)
?/. - c.560G>A r.(?) p.(Arg187His)
?/. - c.560G>A r.(?) p.(Arg187His)
?/. - c.565T>C r.(?) p.(Phe189Leu)
?/. - c.565T>C r.(?) p.(Phe189Leu)
-/. - c.581-17T>C r.(=) p.(=)
-?/. - c.581-10T>C r.(=) p.(=)
-?/. - c.581-10T>C r.(=) p.(=)
-?/. - c.581-8C>T r.(=) p.(=)
+/+ 5i_16i c.(580+1_581-1)_(2333+1_2334-1)del r.(581_2333del) p.(Ala194Glyfs*9)
+/. 5i_16i c.(580+1_581-1)_(2333+1_2334-1)del r.? p.?
+/. 5i_16i c.(580+1_581-1)_(2333+1_2334-1)del r.? p.?
+/. 5i_16i c.(580+1_581-1)_(2333+1_2334-1)del r.? p.?
+/. 5i_16i c.(580+1_581-1)_(2333+1_2334-1)del r.? p.?
+/. 5i_16i c.(580+1_581-1)_(2333+1_2334-1)del r.? p.?
?/. - c.584C>G r.(?) p.(Thr195Ser)
?/. - c.584C>G r.(?) p.(Thr195Ser)
?/. - c.584C>G r.(?) p.(Thr195Ser)
?/. - c.584C>G r.(?) p.(Thr195Ser)
+/+ 07 c.626_627delCA r.(626_627delca) p.(Thr209Serfs*4)
-?/. - c.690C>T r.(?) p.(Tyr230=)
-?/. - c.750A>G r.(?) p.(Pro250=)
-/. - c.762+19del r.(=) p.(=)
-/. - c.763-89C>A r.(=) p.(=)
-/. - c.763-78C>G r.(=) p.(=)
-?/. - c.874T>G r.(?) p.(Phe292Val)
?/. - c.885C>T r.(?) p.(Gly295=)
+/. - c.901_904del r.(?) p.(Thr301ValfsTer7)
+/+ 08 c.916_917delGA r.(916_917delga) p.(Asp306Tyrfs*9)
-?/. - c.921G>A r.(?) p.(Met307Ile)
+?/. - c.938-8A>G r.(=) p.(=)
+?/. - c.979C>T r.(?) p.(Gln327*)
+?/. - c.979C>T r.(?) p.(Gln327*)
-?/. - c.983A>G r.(?) p.(His328Arg)
-?/. - c.983A>G r.(?) p.(His328Arg)
-?/. - c.983A>G r.(?) p.(His328Arg)
?/. - c.1000T>C r.(?) p.(Tyr334His)
+/+ 9a c.1006C>T r.(?) p.(Gln336*)
-?/. - c.1041A>G r.(?) p.(Ser347=)
-?/. - c.1041A>G r.(?) p.(Ser347=)
-?/. - c.1081G>A r.(?) p.(Asp361Asn)
?/. - c.1108G>C r.(?) p.(Asp370His)
+/+ 10-13 c.1206+5_1652-27dup r.spl? p.?
-/. - c.1206+33T>G r.(=) p.(=)
-/. - c.1206+33T>G r.(=) p.(=)
-/. - c.1206+33T>G r.(=) p.(=)
+/+ 10-21 c.1207-2_2824+52509del r.(1207_2824del) p.(Leu403Valfs*11)
+/+ 10 c.1219C>T r.(1219c>u) p.(Gln407*)
+/+ 10 c.1221delA r.(?) p.(Val408Leufs*11)
+/+ 10 c.1225G>T r.(1225g>u) p.(Glu409*)
?/. - c.1248G>T r.(?) p.(Gln416His)
?/. - c.1248G>T r.(?) p.(Gln416His)
+?/. - c.1248G>T r.(?) p.(Gln416His)
?/. - c.1248G>T r.(?) p.(Gln416His)
?/. - c.1248G>T r.(?) p.(Gln416His)
+/+ 10 c.1269_1273delATTGT r.(1269_1273delauugu) p.(Cys425Glyfs*8)
-?/. - c.1293T>G r.(?) p.(Thr431=)
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