Transcript #00009299 (NM_000187.3, HGD gene)

Transcript name homogentisate 1,2-dioxygenase
Gene name HGD (homogentisate 1,2-dioxygenase)
Chromosome 3
Transcript - NCBI ID NM_000187.3
Transcript - Ensembl ID -
Protein - NCBI ID NP_000178.2
Protein - Ensembl ID -
Protein - Uniprot ID -
Exon/intron information Exon/intron information table: HTML, Txt
Remarks -
Date created 0000-00-00 00:00:00 +00:19 (LMT)
Date last edited N/A


Variants

291 entries on 3 pages. Showing entries 1 - 100.
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Affects function     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     
+/. _1_14_ c.-460_*212{0} r.(?) p.(?)
-?/? 13i c.1188+2269_1189-2270[TG[n]TA[n] r.(?) p.(?)
-/. 4i c.282+942_282+979TG[n] r.(?) p.(?)
-/. 4i c.283--5218_283-5168CT[n] r.(?) p.(?)
+/? 1 c.1A>G r.(?) p.(Met1?)
+/? _1_4i c.(?_1)_(282+1_283-1)del r.(?) p.(?)
+/+? 1 c.8A>C r.(?) p.(Glu3Ala)
+/+ 1 c.11T>A r.(?) p.(Leu4*)
+/+? 1 c.11T>C r.(?) p.(Leu4Ser)
+/+? 1i c.16-2063A>C r.(?) p.(Tyr5_Ile6insVal*17)
+/? 2 c.16-272_87+305del r.spl p.(Tyr6_Gln29del)
-?/? 1i c.16-175C>G r.(?) p.(?)
+/. - c.16-1G>A r.spl p.?
+/+ 1i c.16-1G>A r.spl p.(Tyr6_Gln29del)
+/. - c.16-1G>A r.spl? p.?
+/+ 2 c.31_32delinsATT r.(?) p.(Gly11Ilefs*3)
+/+? 2 c.37G>A r.(?) p.(Glu13Lys)
?/. - c.37G>A r.(?) p.(Glu13Lys)
+/+? 2 c.52G>A r.(?) p.(Asp18Asn)
+/? 2 c.52G>T r.(?) p.(Asp18Tyr)
+/+? 2 c.74T>C r.(?) p.(Leu25Pro)
+/+ 2 c.85del r.(?) p.(Gln29Argfs*82)
+/+ 2i c.87+1G>A r.spl p.(Tyr6_Gln29del)
+/. - c.87+1G>T r.spl? p.?
+/+ 2i c.87+8_88-31del r.(?) p.(?)
-?/? 2i c.87+35A>T r.(?) p.(?)
-?/? 2i c.87+118A>G r.(?) p.(?)
-?/? 2i c.88-218A>T r.(?) p.(?)
?/. - c.95C>A r.(?) p.(Pro32His)
+/+? 3 c.98A>G r.(?) p.(Gln33Arg)
+/+ 3 c.119A>C r.(?) p.(Tyr40Ser)
+/+ 3 c.124del r.(?) p.(Glu42Serfs*69)
+/+ 3 c.125A>C r.(?) p.(Glu42Ala)
+/? 3 c.127C>G r.(?) p.(Gln43Glu)
+/+? 3 c.130C>T r.(?) p.(Leu44Phe)
+/? 3 c.131T>C r.(?) p.(Leu44Pro)
+/+? 3 c.140C>T r.(?) p.(Ser47Leu)
+/+? 3 c.157C>T r.(?) p.(Arg53Trp)
+/+? 3 c.158G>A r.(?) p.(Arg53Gln)
+/+? 3 c.171G>C r.(?) p.(Lys57Asn)
+/? 3 c.174A>T r.(?) p.(Arg58Ser)
+/+ 3 c.175del r.(?) p.(Ser59Alafs*52)
-?/? 3i c.176+114T>A r.(?) p.(?)
-?/? 3i c.177-112C>T r.(?) p.(?)
-?/? 3i c.177-52A>C r.(?) p.(?)
-?/? 3i c.177-50C>T r.(?) p.(?)
-?/? 3i c.177-35T>G r.(?) p.(?)
+/+ 3i c.177-2A>G r.spl p.(Trp60Leufs*16)
+/+ 4 c.178T>G r.(?) p.(Trp60Gly)
+/+ 4 c.179G>A r.(?) p.(Trp60*)
+/+ 4 c.180G>A r.(?) p.(Trp60*)
+/+? 4 c.182T>C r.(?) p.(Leu61Pro)
+/? 4 c.184T>A r.(?) p.(Tyr62Asn)
+/+ 4 c.184_187dup r.(?) p.(Arg63Ilefs*2)
+/+ 4 c.185A>G r.(?) p.(Tyr62Cys)
+/+? 4 c.189G>A r.(?) p.(Arg63=)
+/+ 4 c.189G>T r.(?) p.(Arg63Ser)
+/+? 4 c.217T>C r.(?) p.(Phe73Leu)
+/+? 4 c.221A>T r.(?) p.(Glu74Val)
?/. - c.231C>T r.(?) p.(=)
-/. - c.240A>T r.(?) p.(Gln80His)
-?/-? 4 c.240A>T r.(?) p.(Gln80His)
-/. - c.240A>T r.(?) p.(Gln80His)
-/? 4 c.260A>C r.(?) p.(Glu87Ala)
+/+? 4 c.274C>A r.(?) p.(Pro92Thr)
-?/? 4i c.282+31A>G r.(?) p.(?)
+/+ 4i_6i c.283-9199_434+1688del r.(?) p.(Leu95Metfs*33)
-?/? 4i c.283-145C>T r.(?) p.(?)
-?/? 4i c.283-13dup r.(?) p.(?)
-?/? 4i c.283-4T>C r.spl p.?
+/+? 5 c.289T>C r.(?) p.(Trp97Arg)
+?/. - c.289T>G r.(?) p.(Trp97Gly)
+/+ 5 c.289T>G r.(?) p.(Trp97Gly)
+/+ 5 c.291G>A r.(?) p.(Trp97*)
+/+ 5 c.291G>C r.(?) p.(Trp97Cys)
+/+ 5 c.299T>C r.(?) p.(Phe100Ser)
+/+? 5 c.334T>G r.(?) p.(Phe112Val)
+/+ 5i c.342+1G>A r.spl p.(Leu95_Ser114del)
+/. - c.342+1G>T r.spl? p.?
+/+ 5i c.342+1G>T r.spl p.(Leu95_Ser114del)
+/+ 5i c.342+3A>C r.spl p.(Leu95_Ser114del)
-?/? 5i c.342+25T>C r.(?) p.(?)
+/+? 5i c.343-11G>A r.(?) p.(?)
+/+? 6 c.343G>C r.(?) p.(Gly115Arg)
+/+? 6 c.347T>C r.(?) p.(Leu116Pro)
+/+ 6 c.357dupG r.(?) p.(Cys120Valfs*9)
+/+? 6 c.359G>T r.(?) p.(Cys120Phe)
+/+? 6 c.360T>G r.(?) p.(Cys120Trp)
+/+? 6 c.362G>A r.(?) p.(Gly121Glu)
+/+ 6 c.365C>A r.(?) p.(Ala122Asp)
+/+? 6 c.365C>T r.(?) p.(Ala122Val)
?/. - c.365C>T r.(?) p.(Ala122Val)
+/. - c.367G>A r.(?) p.(Gly123Arg)
?/. - c.367G>A r.(?) p.(Gly123Arg)
+/. - c.367G>A r.(?) p.(Gly123Arg)
+/+? 6 c.367G>A r.(?) p.(Gly123Arg)
+/+? 6 c.368G>C r.(?) p.(Gly123Ala)
-/. - c.372C>T r.(?) p.(=)
+/? 6 c.372C>T r.(?) p.(Asp124=)
+/+ 6 c.376_377del r.(?) p.(Lys126Valfs*2)
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