Transcript #00023902 (NM_024598.3, USB1 gene)

Transcript name transcript variant 1
Gene name USB1 (U6 snRNA biogenesis 1)
Chromosome 16
Transcript - NCBI ID NM_024598.3
Transcript - Ensembl ID -
Protein - NCBI ID NP_078874.2
Protein - Ensembl ID -
Protein - Uniprot ID -
Exon/intron information Exon/intron information table: HTML, Txt
Remarks -
Date created 2014-02-03 10:56:05 +01:00 (CET)
Date last edited N/A


Variants

57 entries on 1 page. Showing entries 1 - 57.
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Affects function     

Exon     

AscendingDNA change (cDNA)     

RNA change     

Protein     
?/. - c.-3456C>T r.(?) p.(=)
?/. - c.-3340G>A r.(?) p.(=)
-?/. - c.98+6G>T r.(=) p.(=)
?/. - c.106A>G r.(?) p.(Ser36Gly)
-?/. - c.162G>A r.(?) p.(Pro54=)
+?/+? 2 c.176_177del r.(?) p.(Gly59Alafs*2)
+/+ 2 c.179del r.(?) p.(Pro60Leufs*55)
+/+ 2 c.179del r.(?) p.(Pro60Leufs*55)
+?/+? 2 c.179del r.(?) p.(Pro60Leufs*55)
+?/+? 2 c.179del r.(?) p.(Pro60Leufs*55)
+?/+? 2 c.179del r.(?) p.(Pro60Leufs*55)
+/. - c.232C>T r.(?) p.(Arg78Ter)
+/+ 2 c.232C>T r.232c>u p.Arg78*
+/+ 2 c.232C>T r.232c>u p.Arg78*
?/. - c.233G>A r.(?) p.(Arg78Gln)
+/. - c.243G>A r.(?) p.(Trp81Ter)
+?/+? 2 c.243G>A r.(?) p.(Trp81*)
+?/+? 2 c.243G>A r.(?) p.(Trp81*)
+?/+? 2 c.258T>A r.(?) p.(Tyr86*)
+/+ 2i c.265+2T>G r.spl p.(Tyr89Trpfs*3)
+/+ 2i c.265+2T>G r.spl p.(Tyr89Trpfs*3)
+?/+? 2i c.266-1G>A r.spl p.(Glu90Serfs*8)
+?/+? 3 c.267T>A r.(?) p.(Tyr89*)
-?/. - c.327T>C r.(?) p.(Tyr109=)
./. 3 c.334dup r.(?) p.(Arg112Profs*63)
-?/. - c.344G>A r.(?) p.(Arg115Lys)
+?/+? 3 c.415C>T r.(?) p.(Gln139*)
-?/. - c.449+956C>T r.(=) p.(=)
+?/+? 3i c.450-2A>G r.spl? p.?
+?/+? 4 c.489_492del r.(?) p.(Asn163Lysfs*101)
+?/+? 4 c.499del r.(?) p.(Thr167Profs*98)
+/+ 4 c.502A>G r.450_503del p.Phe151_Arg168del
+?/+? 4i c.504-2A>C r.spl? p.?
+/+ 4i c.504-2A>C r.504_609del p.Thr169Ilefs*61
+/+ 4i c.504-2A>C r.(?) p.(Thr169Ilefs*61)
+/+ 4i c.504-2A>C r.(?) p.(Thr169Ilefs*61)
+/+ 4i c.504-2A>C r.504_609del p.Thr169Ilefs*61
+/+ 4i c.504-2A>C r.(?) p.(Thr169Ilefs*61)
+/+ 4i c.504-2A>C r.(?) p.(Thr169Ilefs*61)
?/. - c.512T>C r.(?) p.(Ile171Thr)
+?/+? 5 c.518T>G r.(?) p.(Leu173Arg)
+/+ 5 c.531del r.531delA p.His179Metfs*86
+/+ 5 c.531del r.531delA p.His179Metfs*86
+/+ 5 c.531del r.531delA p.His179Metfs*86
+/+ 5 c.531del r.531delA p.His179Metfs*86
+?/+? 5 c.541C>T r.(?) p.(Gln181*)
+?/+? 5 c.541C>T r.(?) p.(Gln181*)
+?/+? 5i c.609+1G>A r.spl? p.?
+?/+? 6 c.623A>G r.(?) p.(His208Arg)
+?/+? 6 c.623A>G r.(?) p.(His208Arg)
?/. - c.641G>A r.(?) p.(Cys214Tyr)
?/. - c.641G>A r.(?) p.(Cys214Tyr)
+?/+? 6 c.673C>T r.(?) p.(Gln225*)
+/+ 6_6i c.683_693+1del r.610_693del p.Asp204_Gln231del
+?/+? 6i c.693+1G>T r.610_693del p.(Asp204_Gln231del)
?/. - c.704A>T r.(?) p.(Asp235Val)
-?/. - c.784A>G r.(?) p.(Met262Val)
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