Variant #0000016303 (NC_000008.10:g.100146858_100339991del, NC_000008.10(NM_017890.3):c.1207-2_2824+52509del (VPS13B))

Chromosome 8
Allele Paternal (confirmed)
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.100146858_100339991del
DNA change (hg38) g.99134630_99327763del
Published as 193 kb del: exons 9-19: chr8(hg18): 100216034...100409167; c.1207-2824del/p.L403fsX11
ISCN -
DB-ID VPS13B_000021
Variant remarks 1 German COH1 family (com-het); Chr8(hg18):g.100216034_100409167del = (hg19) g.100146858_100339991del
Reference Rivera-Brugués 2011
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency 0/1612 CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license No license selected
Created by Anne Polvi
Date created 2012-11-14 13:00:16 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
VPS13B NM_017890.3 +/+ 10-21 c.1207-2_2824+52509del r.(1207_2824del) p.(Leu403Valfs*11)


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