Variant #0000016421 (NC_000006.11:g.41130776_41130778del, NC_000006.11(NM_018965.2):c.40+4_40+6del (TREM2))

Chromosome 6
Allele Both (homozygous)
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.41130776_41130778del
DNA change (hg38) g.41163038_41163040del
Published as 40+3delAGG
ISCN -
DB-ID TREM2_000002
Variant remarks 1 Lebanese Maronite PLOSL family (hom); functional studies show significantly-reduced transcription of the allele
Reference PubMed: Chouery et al. 2008
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-11-15 13:58:52 +01:00 (CET)
Date last edited 2020-06-19 11:51:02 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREM2 NM_018965.2 +?/+? 1i c.40+4_40+6del r.40+3delagg p.=


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