Variant #0000016421 (NC_000006.11:g.41130776_41130778del, NC_000006.11(NM_018965.2):c.40+4_40+6del (TREM2))
| Chromosome |
6 |
| Allele |
Both (homozygous) |
| Affects function (as reported) |
Probably affects function |
| Affects function (by curator) |
Probably affects function |
| Classification method |
- |
| Clinical classification |
likely pathogenic |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.41130776_41130778del |
| DNA change (hg38) |
g.41163038_41163040del |
| Published as |
40+3delAGG |
| ISCN |
- |
| DB-ID |
TREM2_000002 |
| Variant remarks |
1 Lebanese Maronite PLOSL family (hom); functional studies show significantly-reduced transcription of the allele |
| Reference |
PubMed: Chouery et al. 2008 |
| ClinVar ID |
- |
| dbSNP ID |
- |
| Origin |
SUMMARY record |
| Segregation |
yes |
| Frequency |
- |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
Retrieve |
| Owner |
Anne Polvi |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Anne Polvi |
| Date created |
2012-11-15 13:58:52 +01:00 (CET) |
| Date last edited |
2020-06-19 11:51:02 +02:00 (CEST) |

Variant on transcripts
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