Variant #0000016424 (NC_000006.11:g.41129159C>T, NM_018965.2:c.233G>A (TREM2))

Chromosome 6
Allele Both (homozygous)
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.41129159C>T
DNA change (hg38) g.41161421C>T
Published as 233G>A
ISCN -
DB-ID TREM2_000005
Variant remarks 2 Swedish PLOSL families (hom)
Reference PubMed: Paloneva et al. 2002
ClinVar ID -
dbSNP ID rs104893998
Origin SUMMARY record
Segregation yes
Frequency 0/100 CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-11-15 13:58:52 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREM2 NM_018965.2 +/+ 2 c.233G>A r.(233g>a) p.(Trp78*)


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