Variant #0000016430 (NC_000006.11:g.41126729C>T, NM_018965.2:c.558G>T (TREM2))

Chromosome 6
Allele Both (homozygous)
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.41126729C>T
DNA change (hg38) -
Published as 558G>A, K186N (corr: 558G>T)
ISCN -
DB-ID TREM2_000011
Variant remarks 1 Norwegian PLOSL family (hom)
Variant Error [EMISMATCH]: This variant seems to mismatch; the genomic and the transcript variant seems to not belong together. Please fix this entry and then remove this message.
Reference PubMed: Paloneva et al. 2002
ClinVar ID -
dbSNP ID rs28937876
Origin SUMMARY record
Segregation yes
Frequency 0/100 CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-11-15 13:58:52 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREM2 NM_018965.2 +?/+? 5 c.558G>T r.(558g>u) p.(Lys186Asn)


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